OncoKB Annotation Demo¶
This notebook demonstrates how to use the export_oncokb_input method to annotate genomic variants with OncoKB data. We'll use two different input files:
- A VCF file with GRCh38 assembly:
subset_1k_variants_ALL.chr10.shapeit2_integrated_snvindels_v2a_27022019.GRCh38.phased_vep_protein_gene_variant_class.vcf - A MAF file with GRCh37 assembly:
tcga_laml.maf.gz
The notebook will show how to load these files, annotate them with OncoKB data, and display the resulting annotations.
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import pandas as pd
import matplotlib.pyplot as plt
from pathlib import Path
import logging
import requests
# Import necessary functions
from pyMut.input import read_maf, read_vcf
import pandas as pd
import matplotlib.pyplot as plt
from pathlib import Path
import logging
import requests
# Import necessary functions
from pyMut.input import read_maf, read_vcf
Get OncoKB API Token¶
We need an OncoKB API token to use the annotation service. We'll try to read it from a .env file.
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# Get the OncoKB API token
import os
def read_oncokb_token(env_path):
"""Read OncoKB API token from .env file"""
try:
# Try using python-dotenv if available
from dotenv import load_dotenv
load_dotenv(env_path)
return os.getenv('ONCOKB_API')
except ImportError:
# Manual parsing if python-dotenv is not available
if env_path.exists():
with open(env_path, 'r') as f:
for line in f:
if line.startswith('ONCOKB_API='):
return line.split('=', 1)[1].strip()
return None
env_path = Path("../../../.env")
oncokb_token = read_oncokb_token(env_path)
if not oncokb_token:
logging.warning("OncoKB API token not found. Please create a .env file with ONCOKB_API=your_token")
# For demonstration purposes, you can enter your token manually:
oncokb_token = input("Enter your OncoKB token: ")
else:
logging.info("OncoKB API token loaded successfully")
# Get the OncoKB API token
import os
def read_oncokb_token(env_path):
"""Read OncoKB API token from .env file"""
try:
# Try using python-dotenv if available
from dotenv import load_dotenv
load_dotenv(env_path)
return os.getenv('ONCOKB_API')
except ImportError:
# Manual parsing if python-dotenv is not available
if env_path.exists():
with open(env_path, 'r') as f:
for line in f:
if line.startswith('ONCOKB_API='):
return line.split('=', 1)[1].strip()
return None
env_path = Path("../../../.env")
oncokb_token = read_oncokb_token(env_path)
if not oncokb_token:
logging.warning("OncoKB API token not found. Please create a .env file with ONCOKB_API=your_token")
# For demonstration purposes, you can enter your token manually:
oncokb_token = input("Enter your OncoKB token: ")
else:
logging.info("OncoKB API token loaded successfully")
2025-08-01 01:31:07,607 | INFO | root | OncoKB API token loaded successfully
Monitor API Requests¶
We'll add a monkey patch to monitor API requests and responses for debugging purposes.
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# Add a monkey patch to log API requests and responses
original_post = requests.Session.post
def logging_post(*args, **kwargs):
logging.info(f"API Request URL: {args[1]}")
response = original_post(*args, **kwargs)
logging.info(f"API Response Status Code: {response.status_code}")
return response
# Add a monkey patch to log API requests and responses
original_post = requests.Session.post
def logging_post(*args, **kwargs):
logging.info(f"API Request URL: {args[1]}")
response = original_post(*args, **kwargs)
logging.info(f"API Response Status Code: {response.status_code}")
return response
Process MAF File (GRCh37)¶
Now, we'll load and annotate the MAF file with GRCh37 assembly.
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# Define the path to the MAF file
maf_path = "../../../src/pyMut/data/examples/MAF/tcga_laml.maf.gz"
# Load the MAF file with assembly 37
logging.info(f"Loading MAF file: {maf_path}")
maf_py_mut = read_maf(maf_path, assembly="37")
# Display basic information about the loaded data
logging.info(f"Loaded {len(maf_py_mut.data)} variants from MAF file")
logging.info(f"Assembly: {maf_py_mut.metadata.assembly}")
# Show the first few rows of the data
print("\nSample of MAF data before annotation:")
display(maf_py_mut.data.head())
# Define the path to the MAF file
maf_path = "../../../src/pyMut/data/examples/MAF/tcga_laml.maf.gz"
# Load the MAF file with assembly 37
logging.info(f"Loading MAF file: {maf_path}")
maf_py_mut = read_maf(maf_path, assembly="37")
# Display basic information about the loaded data
logging.info(f"Loaded {len(maf_py_mut.data)} variants from MAF file")
logging.info(f"Assembly: {maf_py_mut.metadata.assembly}")
# Show the first few rows of the data
print("\nSample of MAF data before annotation:")
display(maf_py_mut.data.head())
2025-08-01 01:31:07,705 | INFO | root | Loading MAF file: ../../../src/pyMut/data/examples/MAF/tcga_laml.maf.gz 2025-08-01 01:31:07,705 | INFO | pyMut.input | Starting MAF reading: ../../../src/pyMut/data/examples/MAF/tcga_laml.maf.gz 2025-08-01 01:31:07,706 | INFO | pyMut.input | Loading from cache: ../../../src/pyMut/data/examples/MAF/.pymut_cache/tcga_laml.maf_8bfbda65c4b23428.parquet 2025-08-01 01:31:07,760 | INFO | pyMut.input | Cache loaded successfully in 0.05 seconds 2025-08-01 01:31:07,760 | INFO | root | Loaded 2091 variants from MAF file 2025-08-01 01:31:07,761 | INFO | root | Assembly: 37
Sample of MAF data before annotation:
| CHROM | POS | ID | REF | ALT | QUAL | FILTER | TCGA-AB-2988 | TCGA-AB-2869 | TCGA-AB-3009 | ... | Strand | Variant_Classification | Variant_Type | Reference_Allele | Tumor_Seq_Allele1 | Tumor_Seq_Allele2 | Tumor_Sample_Barcode | Protein_Change | i_TumorVAF_WU | i_transcript_name | |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 0 | chr9 | 100077177 | . | T | C | . | . | T|T | T|T | T|T | ... | + | SILENT | SNP | T | T | C | TCGA-AB-2886 | p.T431T | 9.76 | NM_020893.1 |
| 1 | chr9 | 100085148 | . | G | A | . | . | G|G | G|G | G|G | ... | + | MISSENSE_MUTATION | SNP | G | G | A | TCGA-AB-2917 | p.R581H | 18.4 | NM_020893.1 |
| 2 | chr9 | 100971322 | . | A | C | . | . | A|A | A|A | A|A | ... | + | MISSENSE_MUTATION | SNP | A | A | C | TCGA-AB-2841 | p.L593R | 45.83 | NM_018421.3 |
| 3 | chr9 | 104086335 | . | C | T | . | . | C|C | C|C | C|C | ... | + | MISSENSE_MUTATION | SNP | C | C | T | TCGA-AB-2877 | p.T325I | 37.12 | NM_017753.2 |
| 4 | chr9 | 104124840 | . | G | A | . | . | G|A | G|G | G|G | ... | + | MISSENSE_MUTATION | SNP | G | G | A | TCGA-AB-2988 | p.T376M | 48.35 | NM_001701.1 |
5 rows × 216 columns
Annotate MAF data with OncoKB¶
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# Annotate the MAF data with OncoKB
if oncokb_token:
logging.info("Annotating MAF data with OncoKB...")
try:
# Apply the monitoring patch
requests.Session.post = logging_post
# Perform the annotation
maf_annotated_data = maf_py_mut.actionable_mutations_oncokb(
token=oncokb_token,
batch_size=1000,
timeout=30,
max_retries=3,
retry_backoff=1.0
)
# Restore the original post method
requests.Session.post = original_post
# Show the first few rows of the annotated data
print("\nSample of MAF data after annotation:")
display(maf_py_mut.data.head())
# Show annotation statistics
def show_annotation_stats(py_mut_obj, dataset_name):
"""Show basic annotation statistics"""
oncokb_columns = [col for col in py_mut_obj.data.columns if col.startswith('oncokb_')]
if oncokb_columns:
print(f"\n{dataset_name} - OncoKB annotation statistics:")
for col in oncokb_columns:
non_null_count = py_mut_obj.data[col].notna().sum()
print(f" {col}: {non_null_count} variants")
else:
print(f"\n{dataset_name} - No OncoKB annotations found")
show_annotation_stats(maf_py_mut, "MAF File (GRCh37)")
except Exception as e:
logging.error(f"Error during OncoKB annotation for MAF: {e}")
# Restore the original post method
requests.Session.post = original_post
else:
logging.error("Cannot perform annotation without a valid OncoKB token")
# Annotate the MAF data with OncoKB
if oncokb_token:
logging.info("Annotating MAF data with OncoKB...")
try:
# Apply the monitoring patch
requests.Session.post = logging_post
# Perform the annotation
maf_annotated_data = maf_py_mut.actionable_mutations_oncokb(
token=oncokb_token,
batch_size=1000,
timeout=30,
max_retries=3,
retry_backoff=1.0
)
# Restore the original post method
requests.Session.post = original_post
# Show the first few rows of the annotated data
print("\nSample of MAF data after annotation:")
display(maf_py_mut.data.head())
# Show annotation statistics
def show_annotation_stats(py_mut_obj, dataset_name):
"""Show basic annotation statistics"""
oncokb_columns = [col for col in py_mut_obj.data.columns if col.startswith('oncokb_')]
if oncokb_columns:
print(f"\n{dataset_name} - OncoKB annotation statistics:")
for col in oncokb_columns:
non_null_count = py_mut_obj.data[col].notna().sum()
print(f" {col}: {non_null_count} variants")
else:
print(f"\n{dataset_name} - No OncoKB annotations found")
show_annotation_stats(maf_py_mut, "MAF File (GRCh37)")
except Exception as e:
logging.error(f"Error during OncoKB annotation for MAF: {e}")
# Restore the original post method
requests.Session.post = original_post
else:
logging.error("Cannot perform annotation without a valid OncoKB token")
2025-08-01 01:31:07,799 | INFO | root | Annotating MAF data with OncoKB... 2025-08-01 01:31:07,800 | INFO | pyMut.annotate.actionable_mutation | Using reference genome: GRCh37 2025-08-01 01:31:07,804 | INFO | pyMut.annotate.actionable_mutation | Splitting 2091 variants into 3 batches of max 1000 variants each /home/luisruimore/anaconda3/envs/PyMutTFG/lib/python3.10/site-packages/numpy/core/fromnumeric.py:59: FutureWarning: 'DataFrame.swapaxes' is deprecated and will be removed in a future version. Please use 'DataFrame.transpose' instead. return bound(*args, **kwds) 2025-08-01 01:31:07,809 | INFO | pyMut.annotate.actionable_mutation | Processing batch 1/3 with 697 variants 2025-08-01 01:31:07,845 | INFO | pyMut.annotate.actionable_mutation | Sending batch 1/3 to OncoKB API 2025-08-01 01:31:07,846 | INFO | root | API Request URL: https://www.oncokb.org/api/v1/annotate/mutations/byGenomicChange 2025-08-01 01:31:11,811 | INFO | root | API Response Status Code: 200 2025-08-01 01:31:11,819 | INFO | pyMut.annotate.actionable_mutation | Batch 1/3 processed successfully 2025-08-01 01:31:11,820 | WARNING | pyMut.annotate.actionable_mutation | Gene does not exist for variant at index 0 in batch 1 2025-08-01 01:31:11,820 | WARNING | pyMut.annotate.actionable_mutation | Unknown oncogenicity for variant at index 0 in batch 1 2025-08-01 01:31:11,821 | WARNING | pyMut.annotate.actionable_mutation | Gene does not exist for variant at index 1 in batch 1 2025-08-01 01:31:11,821 | WARNING | pyMut.annotate.actionable_mutation | Unknown oncogenicity for variant at index 1 in batch 1 2025-08-01 01:31:11,821 | WARNING | pyMut.annotate.actionable_mutation | Gene does not exist for variant at index 2 in batch 1 2025-08-01 01:31:11,821 | WARNING | pyMut.annotate.actionable_mutation | Unknown oncogenicity for variant at index 2 in batch 1 2025-08-01 01:31:11,822 | WARNING | pyMut.annotate.actionable_mutation | Gene does not exist for variant at index 3 in batch 1 2025-08-01 01:31:11,822 | WARNING | pyMut.annotate.actionable_mutation | Unknown oncogenicity for variant at index 3 in batch 1 2025-08-01 01:31:11,822 | WARNING | pyMut.annotate.actionable_mutation | Gene does not exist for variant at index 4 in batch 1 2025-08-01 01:31:11,822 | WARNING | pyMut.annotate.actionable_mutation | Unknown oncogenicity for variant at index 4 in batch 1 2025-08-01 01:31:11,823 | WARNING | pyMut.annotate.actionable_mutation | Gene does not exist for variant at index 5 in batch 1 2025-08-01 01:31:11,823 | WARNING | pyMut.annotate.actionable_mutation | Unknown oncogenicity for variant at index 5 in batch 1 2025-08-01 01:31:11,824 | WARNING | pyMut.annotate.actionable_mutation | Gene does not exist for variant at index 6 in batch 1 2025-08-01 01:31:11,824 | WARNING | pyMut.annotate.actionable_mutation | Unknown oncogenicity for variant at index 6 in batch 1 2025-08-01 01:31:11,824 | WARNING | pyMut.annotate.actionable_mutation | Gene does not exist for variant at index 7 in batch 1 2025-08-01 01:31:11,824 | WARNING | pyMut.annotate.actionable_mutation | Unknown oncogenicity for variant at index 7 in batch 1 2025-08-01 01:31:11,824 | WARNING | pyMut.annotate.actionable_mutation | Gene does not exist for variant at index 8 in batch 1 2025-08-01 01:31:11,825 | WARNING | pyMut.annotate.actionable_mutation | Unknown oncogenicity for variant at index 8 in batch 1 2025-08-01 01:31:11,825 | WARNING | pyMut.annotate.actionable_mutation | Gene does not exist for variant at index 9 in batch 1 2025-08-01 01:31:11,825 | WARNING | pyMut.annotate.actionable_mutation | Unknown oncogenicity for variant at index 9 in batch 1 2025-08-01 01:31:11,825 | WARNING | pyMut.annotate.actionable_mutation | Gene does not exist for variant at index 10 in batch 1 2025-08-01 01:31:11,826 | WARNING | pyMut.annotate.actionable_mutation | Unknown oncogenicity for variant at index 10 in batch 1 2025-08-01 01:31:11,826 | WARNING | pyMut.annotate.actionable_mutation | Gene does not exist for variant at index 11 in batch 1 2025-08-01 01:31:11,826 | WARNING | pyMut.annotate.actionable_mutation | Unknown oncogenicity for variant at index 11 in batch 1 2025-08-01 01:31:11,826 | WARNING | pyMut.annotate.actionable_mutation | Gene does not exist for variant at index 12 in batch 1 2025-08-01 01:31:11,826 | WARNING | pyMut.annotate.actionable_mutation | Unknown oncogenicity for variant at index 12 in batch 1 2025-08-01 01:31:11,828 | WARNING | pyMut.annotate.actionable_mutation | Gene does not exist for variant at index 13 in batch 1 2025-08-01 01:31:11,828 | WARNING | pyMut.annotate.actionable_mutation | Unknown oncogenicity for variant at index 13 in batch 1 2025-08-01 01:31:11,828 | WARNING | pyMut.annotate.actionable_mutation | Gene does not exist for variant at index 14 in batch 1 2025-08-01 01:31:11,828 | WARNING | pyMut.annotate.actionable_mutation | Unknown oncogenicity for variant at index 14 in batch 1 2025-08-01 01:31:11,829 | WARNING | pyMut.annotate.actionable_mutation | Gene does not exist for variant at index 15 in batch 1 2025-08-01 01:31:11,829 | WARNING | pyMut.annotate.actionable_mutation | Unknown oncogenicity for variant at index 15 in batch 1 2025-08-01 01:31:11,829 | WARNING | pyMut.annotate.actionable_mutation | Gene does not exist for variant at index 16 in batch 1 2025-08-01 01:31:11,830 | WARNING | pyMut.annotate.actionable_mutation | Unknown oncogenicity for variant at index 16 in batch 1 2025-08-01 01:31:11,830 | WARNING | pyMut.annotate.actionable_mutation | Gene does not exist for variant at index 17 in batch 1 2025-08-01 01:31:11,830 | WARNING | pyMut.annotate.actionable_mutation | Unknown oncogenicity for variant at index 17 in batch 1 2025-08-01 01:31:11,831 | WARNING | pyMut.annotate.actionable_mutation | Gene does not exist for variant at index 18 in batch 1 2025-08-01 01:31:11,831 | WARNING | pyMut.annotate.actionable_mutation | Unknown oncogenicity for variant at index 18 in batch 1 2025-08-01 01:31:11,831 | WARNING | pyMut.annotate.actionable_mutation | Gene does not exist for variant at index 19 in batch 1 2025-08-01 01:31:11,831 | WARNING | pyMut.annotate.actionable_mutation | Unknown oncogenicity for variant at index 19 in batch 1 2025-08-01 01:31:11,832 | WARNING | pyMut.annotate.actionable_mutation | Gene does not exist for variant at index 20 in batch 1 2025-08-01 01:31:11,832 | WARNING | pyMut.annotate.actionable_mutation | Unknown oncogenicity for variant at index 20 in batch 1 2025-08-01 01:31:11,833 | WARNING | pyMut.annotate.actionable_mutation | Unknown oncogenicity for variant at index 21 in batch 1 2025-08-01 01:31:11,833 | WARNING | pyMut.annotate.actionable_mutation | Gene does not exist for variant at index 22 in batch 1 2025-08-01 01:31:11,834 | WARNING | pyMut.annotate.actionable_mutation | Unknown oncogenicity for variant at index 22 in batch 1 2025-08-01 01:31:11,834 | WARNING | pyMut.annotate.actionable_mutation | Gene does not exist for variant at index 23 in batch 1 2025-08-01 01:31:11,834 | WARNING | pyMut.annotate.actionable_mutation | Unknown oncogenicity for variant at index 23 in batch 1 2025-08-01 01:31:11,835 | WARNING | pyMut.annotate.actionable_mutation | Gene does not exist for variant at index 24 in batch 1 2025-08-01 01:31:11,835 | WARNING | pyMut.annotate.actionable_mutation | Unknown oncogenicity for variant at index 24 in batch 1 2025-08-01 01:31:11,835 | WARNING | pyMut.annotate.actionable_mutation | Gene does not exist for variant at index 25 in batch 1 2025-08-01 01:31:11,836 | WARNING | pyMut.annotate.actionable_mutation | Unknown oncogenicity for variant at index 25 in batch 1 2025-08-01 01:31:11,836 | WARNING | pyMut.annotate.actionable_mutation | Unknown oncogenicity for variant at index 26 in batch 1 2025-08-01 01:31:11,836 | WARNING | pyMut.annotate.actionable_mutation | Gene does not exist for variant at index 27 in batch 1 2025-08-01 01:31:11,837 | WARNING | pyMut.annotate.actionable_mutation | Unknown oncogenicity for variant at index 27 in batch 1 2025-08-01 01:31:11,837 | WARNING | pyMut.annotate.actionable_mutation | Gene does not exist for variant at index 28 in batch 1 2025-08-01 01:31:11,837 | WARNING | pyMut.annotate.actionable_mutation | Unknown oncogenicity for variant at index 28 in batch 1 2025-08-01 01:31:11,838 | WARNING | pyMut.annotate.actionable_mutation | Gene does not exist for variant at index 29 in batch 1 2025-08-01 01:31:11,838 | WARNING | pyMut.annotate.actionable_mutation | Unknown oncogenicity for variant at index 29 in batch 1 2025-08-01 01:31:11,838 | WARNING | pyMut.annotate.actionable_mutation | Gene does not exist for variant at index 30 in batch 1 2025-08-01 01:31:11,838 | WARNING | pyMut.annotate.actionable_mutation | Unknown oncogenicity for variant at index 30 in batch 1 2025-08-01 01:31:11,839 | WARNING | pyMut.annotate.actionable_mutation | Gene does not exist for variant at index 31 in batch 1 2025-08-01 01:31:11,839 | WARNING | pyMut.annotate.actionable_mutation | Unknown oncogenicity for variant at index 31 in batch 1 2025-08-01 01:31:11,839 | WARNING | pyMut.annotate.actionable_mutation | Gene does not exist for variant at index 32 in batch 1 2025-08-01 01:31:11,840 | WARNING | pyMut.annotate.actionable_mutation | Unknown oncogenicity for variant at index 32 in batch 1 2025-08-01 01:31:11,840 | WARNING | pyMut.annotate.actionable_mutation | Gene does not exist for variant at index 33 in batch 1 2025-08-01 01:31:11,841 | WARNING | pyMut.annotate.actionable_mutation | Unknown oncogenicity for variant at index 33 in batch 1 2025-08-01 01:31:11,841 | WARNING | pyMut.annotate.actionable_mutation | Gene does not exist for variant at index 34 in batch 1 2025-08-01 01:31:11,841 | WARNING | pyMut.annotate.actionable_mutation | Unknown oncogenicity for variant at index 34 in batch 1 2025-08-01 01:31:11,841 | WARNING | pyMut.annotate.actionable_mutation | Unknown oncogenicity for variant at index 35 in batch 1 2025-08-01 01:31:11,842 | WARNING | pyMut.annotate.actionable_mutation | Gene does not exist for variant at index 36 in batch 1 2025-08-01 01:31:11,842 | WARNING | pyMut.annotate.actionable_mutation | Unknown oncogenicity for variant at index 36 in batch 1 2025-08-01 01:31:11,842 | WARNING | pyMut.annotate.actionable_mutation | Unknown oncogenicity for variant at index 37 in batch 1 2025-08-01 01:31:11,842 | WARNING | pyMut.annotate.actionable_mutation | Gene does not exist for variant at index 38 in batch 1 2025-08-01 01:31:11,842 | WARNING | pyMut.annotate.actionable_mutation | Unknown oncogenicity for variant at index 38 in batch 1 2025-08-01 01:31:11,843 | WARNING | pyMut.annotate.actionable_mutation | Gene does not exist for variant at index 39 in batch 1 2025-08-01 01:31:11,845 | WARNING | pyMut.annotate.actionable_mutation | Unknown oncogenicity for variant at index 39 in batch 1 2025-08-01 01:31:11,847 | WARNING | pyMut.annotate.actionable_mutation | Gene does not exist for variant at index 40 in batch 1 2025-08-01 01:31:11,848 | WARNING | pyMut.annotate.actionable_mutation | Unknown oncogenicity for variant at index 40 in batch 1 2025-08-01 01:31:11,848 | WARNING | pyMut.annotate.actionable_mutation | Gene does not exist for variant at index 41 in batch 1 2025-08-01 01:31:11,849 | WARNING | pyMut.annotate.actionable_mutation | Unknown oncogenicity for variant at index 41 in batch 1 2025-08-01 01:31:11,849 | WARNING | pyMut.annotate.actionable_mutation | Gene does not exist for variant at index 42 in batch 1 2025-08-01 01:31:11,849 | WARNING | pyMut.annotate.actionable_mutation | Unknown oncogenicity for variant at index 42 in batch 1 2025-08-01 01:31:11,849 | WARNING | pyMut.annotate.actionable_mutation | Gene does not exist for variant at index 43 in batch 1 2025-08-01 01:31:11,850 | WARNING | pyMut.annotate.actionable_mutation | Unknown oncogenicity for variant at index 43 in batch 1 2025-08-01 01:31:11,850 | WARNING | pyMut.annotate.actionable_mutation | Gene does not exist for variant at index 44 in batch 1 2025-08-01 01:31:11,850 | WARNING | pyMut.annotate.actionable_mutation | Unknown oncogenicity for variant at index 44 in batch 1 2025-08-01 01:31:11,851 | WARNING | pyMut.annotate.actionable_mutation | Gene does not exist for variant at index 45 in batch 1 2025-08-01 01:31:11,851 | WARNING | pyMut.annotate.actionable_mutation | Unknown oncogenicity for variant at index 45 in batch 1 2025-08-01 01:31:11,852 | WARNING | pyMut.annotate.actionable_mutation | Gene does not exist for variant at index 46 in batch 1 2025-08-01 01:31:11,852 | WARNING | pyMut.annotate.actionable_mutation | Unknown oncogenicity for variant at index 46 in batch 1 2025-08-01 01:31:11,853 | WARNING | pyMut.annotate.actionable_mutation | Gene does not exist for variant at index 47 in batch 1 2025-08-01 01:31:11,853 | WARNING | pyMut.annotate.actionable_mutation | Unknown oncogenicity for variant at index 47 in batch 1 2025-08-01 01:31:11,854 | WARNING | pyMut.annotate.actionable_mutation | Gene does not exist for variant at index 48 in batch 1 2025-08-01 01:31:11,854 | WARNING | pyMut.annotate.actionable_mutation | Unknown oncogenicity for variant at index 48 in batch 1 2025-08-01 01:31:11,854 | WARNING | pyMut.annotate.actionable_mutation | Gene does not exist for variant at index 49 in batch 1 2025-08-01 01:31:11,855 | WARNING | pyMut.annotate.actionable_mutation | Unknown oncogenicity for variant at index 49 in batch 1 2025-08-01 01:31:11,855 | WARNING | pyMut.annotate.actionable_mutation | Gene does not exist for variant at index 50 in batch 1 2025-08-01 01:31:11,855 | WARNING | pyMut.annotate.actionable_mutation | Unknown oncogenicity for variant at index 50 in batch 1 2025-08-01 01:31:11,856 | WARNING | pyMut.annotate.actionable_mutation | Gene does not exist for variant at index 51 in batch 1 2025-08-01 01:31:11,857 | WARNING | pyMut.annotate.actionable_mutation | Unknown oncogenicity for variant at index 51 in batch 1 2025-08-01 01:31:11,857 | WARNING | pyMut.annotate.actionable_mutation | Gene does not exist for variant at index 52 in batch 1 2025-08-01 01:31:11,857 | WARNING | pyMut.annotate.actionable_mutation | Unknown oncogenicity for variant at index 52 in batch 1 2025-08-01 01:31:11,857 | WARNING | pyMut.annotate.actionable_mutation | Unknown oncogenicity for variant at index 53 in batch 1 2025-08-01 01:31:11,858 | WARNING | pyMut.annotate.actionable_mutation | Gene does not exist for variant at index 54 in batch 1 2025-08-01 01:31:11,858 | WARNING | pyMut.annotate.actionable_mutation | Unknown oncogenicity for variant at index 54 in batch 1 2025-08-01 01:31:11,859 | WARNING | pyMut.annotate.actionable_mutation | Gene does not exist for variant at index 55 in batch 1 2025-08-01 01:31:11,859 | WARNING | pyMut.annotate.actionable_mutation | Unknown oncogenicity for variant at index 55 in batch 1 2025-08-01 01:31:11,859 | WARNING | pyMut.annotate.actionable_mutation | Gene does not exist for variant at index 56 in batch 1 2025-08-01 01:31:11,859 | WARNING | pyMut.annotate.actionable_mutation | Unknown oncogenicity for variant at index 56 in batch 1 2025-08-01 01:31:11,859 | WARNING | pyMut.annotate.actionable_mutation | Gene does not exist for variant at index 57 in batch 1 2025-08-01 01:31:11,860 | WARNING | pyMut.annotate.actionable_mutation | Unknown oncogenicity for variant at index 57 in batch 1 2025-08-01 01:31:11,861 | WARNING | pyMut.annotate.actionable_mutation | Gene does not exist for variant at index 58 in batch 1 2025-08-01 01:31:11,861 | WARNING | pyMut.annotate.actionable_mutation | Unknown oncogenicity for variant at index 58 in batch 1 2025-08-01 01:31:11,861 | WARNING | pyMut.annotate.actionable_mutation | Unknown oncogenicity for variant at index 59 in batch 1 2025-08-01 01:31:11,861 | WARNING | pyMut.annotate.actionable_mutation | Unknown oncogenicity for variant at index 60 in batch 1 2025-08-01 01:31:11,862 | WARNING | pyMut.annotate.actionable_mutation | Gene does not exist for variant at index 61 in batch 1 2025-08-01 01:31:11,862 | WARNING | pyMut.annotate.actionable_mutation | Unknown oncogenicity for variant at index 61 in batch 1 2025-08-01 01:31:11,862 | WARNING | pyMut.annotate.actionable_mutation | Gene does not exist for variant at index 62 in batch 1 2025-08-01 01:31:11,862 | WARNING | pyMut.annotate.actionable_mutation | Unknown oncogenicity for variant at index 62 in batch 1 2025-08-01 01:31:11,863 | WARNING | pyMut.annotate.actionable_mutation | Gene does not exist for variant at index 63 in batch 1 2025-08-01 01:31:11,863 | WARNING | pyMut.annotate.actionable_mutation | Unknown oncogenicity for variant at index 63 in batch 1 2025-08-01 01:31:11,863 | WARNING | pyMut.annotate.actionable_mutation | Gene does not exist for variant at index 64 in batch 1 2025-08-01 01:31:11,863 | WARNING | pyMut.annotate.actionable_mutation | Unknown oncogenicity for variant at index 64 in batch 1 2025-08-01 01:31:11,864 | WARNING | pyMut.annotate.actionable_mutation | Gene does not exist for variant at index 65 in batch 1 2025-08-01 01:31:11,864 | WARNING | pyMut.annotate.actionable_mutation | Unknown oncogenicity for variant at index 65 in batch 1 2025-08-01 01:31:11,864 | WARNING | pyMut.annotate.actionable_mutation | Gene does not exist for variant at index 66 in batch 1 2025-08-01 01:31:11,864 | WARNING | pyMut.annotate.actionable_mutation | Unknown oncogenicity for variant at index 66 in batch 1 2025-08-01 01:31:11,865 | WARNING | pyMut.annotate.actionable_mutation | Gene does not exist for variant at index 67 in batch 1 2025-08-01 01:31:11,865 | WARNING | pyMut.annotate.actionable_mutation | Unknown oncogenicity for variant at index 67 in batch 1 2025-08-01 01:31:11,865 | WARNING | pyMut.annotate.actionable_mutation | Gene does not exist for variant at index 68 in batch 1 2025-08-01 01:31:11,865 | WARNING | pyMut.annotate.actionable_mutation | Unknown oncogenicity for variant at index 68 in batch 1 2025-08-01 01:31:11,866 | WARNING | pyMut.annotate.actionable_mutation | Gene does not exist for variant at index 69 in batch 1 2025-08-01 01:31:11,866 | WARNING | pyMut.annotate.actionable_mutation | Unknown oncogenicity for variant at index 69 in batch 1 2025-08-01 01:31:11,866 | WARNING | pyMut.annotate.actionable_mutation | Gene does not exist for variant at index 70 in batch 1 2025-08-01 01:31:11,866 | WARNING | pyMut.annotate.actionable_mutation | Unknown oncogenicity for variant at index 70 in batch 1 2025-08-01 01:31:11,867 | WARNING | pyMut.annotate.actionable_mutation | Gene does not exist for variant at index 71 in batch 1 2025-08-01 01:31:11,867 | WARNING | pyMut.annotate.actionable_mutation | Unknown oncogenicity for variant at index 71 in batch 1 2025-08-01 01:31:11,869 | WARNING | pyMut.annotate.actionable_mutation | Gene does not exist for variant at index 72 in batch 1 2025-08-01 01:31:11,870 | WARNING | pyMut.annotate.actionable_mutation | Unknown oncogenicity for variant at index 72 in batch 1 2025-08-01 01:31:11,870 | WARNING | pyMut.annotate.actionable_mutation | Gene does not exist for variant at index 73 in batch 1 2025-08-01 01:31:11,870 | WARNING | pyMut.annotate.actionable_mutation | Unknown oncogenicity for variant at index 73 in batch 1 2025-08-01 01:31:11,870 | WARNING | pyMut.annotate.actionable_mutation | Gene does not exist for variant at index 74 in batch 1 2025-08-01 01:31:11,871 | WARNING | pyMut.annotate.actionable_mutation | Unknown oncogenicity for variant at index 74 in batch 1 2025-08-01 01:31:11,871 | WARNING | pyMut.annotate.actionable_mutation | Gene does not exist for variant at index 75 in batch 1 2025-08-01 01:31:11,871 | WARNING | pyMut.annotate.actionable_mutation | Unknown oncogenicity for variant at index 75 in batch 1 2025-08-01 01:31:11,872 | WARNING | pyMut.annotate.actionable_mutation | Gene does not exist for variant at index 76 in batch 1 2025-08-01 01:31:11,872 | WARNING | pyMut.annotate.actionable_mutation | Unknown oncogenicity for variant at index 76 in batch 1 2025-08-01 01:31:11,873 | WARNING | pyMut.annotate.actionable_mutation | Gene does not exist for variant at index 77 in batch 1 2025-08-01 01:31:11,873 | WARNING | pyMut.annotate.actionable_mutation | Unknown oncogenicity for variant at index 77 in batch 1 2025-08-01 01:31:11,873 | WARNING | pyMut.annotate.actionable_mutation | Gene does not exist for variant at index 78 in batch 1 2025-08-01 01:31:11,874 | WARNING | pyMut.annotate.actionable_mutation | Unknown oncogenicity for variant at index 78 in batch 1 2025-08-01 01:31:11,874 | WARNING | pyMut.annotate.actionable_mutation | Gene does not exist for variant at index 79 in batch 1 2025-08-01 01:31:11,874 | WARNING | pyMut.annotate.actionable_mutation | Unknown oncogenicity for variant at index 79 in batch 1 2025-08-01 01:31:11,875 | WARNING | pyMut.annotate.actionable_mutation | Unknown oncogenicity for variant at index 87 in batch 1 2025-08-01 01:31:11,875 | WARNING | pyMut.annotate.actionable_mutation | Gene does not exist for variant at index 88 in batch 1 2025-08-01 01:31:11,875 | WARNING | pyMut.annotate.actionable_mutation | Unknown oncogenicity for variant at index 88 in batch 1 2025-08-01 01:31:11,876 | WARNING | pyMut.annotate.actionable_mutation | Gene does not exist for variant at index 89 in batch 1 2025-08-01 01:31:11,876 | WARNING | pyMut.annotate.actionable_mutation | Unknown oncogenicity for variant at index 89 in batch 1 2025-08-01 01:31:11,876 | WARNING | pyMut.annotate.actionable_mutation | Gene does not exist for variant at index 90 in batch 1 2025-08-01 01:31:11,877 | WARNING | pyMut.annotate.actionable_mutation | Unknown oncogenicity for variant at index 90 in batch 1 2025-08-01 01:31:11,877 | WARNING | pyMut.annotate.actionable_mutation | Gene does not exist for variant at index 91 in batch 1 2025-08-01 01:31:11,878 | WARNING | pyMut.annotate.actionable_mutation | Unknown oncogenicity for variant at index 91 in batch 1 2025-08-01 01:31:11,878 | WARNING | pyMut.annotate.actionable_mutation | Unknown oncogenicity for variant at index 96 in batch 1 2025-08-01 01:31:11,878 | WARNING | pyMut.annotate.actionable_mutation | Unknown oncogenicity for variant at index 97 in batch 1 2025-08-01 01:31:11,879 | WARNING | pyMut.annotate.actionable_mutation | Gene does not exist for variant at index 98 in batch 1 2025-08-01 01:31:11,879 | WARNING | pyMut.annotate.actionable_mutation | Unknown oncogenicity for variant at index 98 in batch 1 2025-08-01 01:31:11,879 | WARNING | pyMut.annotate.actionable_mutation | Gene does not exist for variant at index 99 in batch 1 2025-08-01 01:31:11,879 | WARNING | pyMut.annotate.actionable_mutation | Unknown oncogenicity for variant at index 99 in batch 1 2025-08-01 01:31:11,880 | WARNING | pyMut.annotate.actionable_mutation | Unknown oncogenicity for variant at index 100 in batch 1 2025-08-01 01:31:11,880 | WARNING | pyMut.annotate.actionable_mutation | Unknown oncogenicity for variant at index 101 in batch 1 2025-08-01 01:31:11,881 | WARNING | pyMut.annotate.actionable_mutation | Gene does not exist for variant at index 102 in batch 1 2025-08-01 01:31:11,881 | WARNING | pyMut.annotate.actionable_mutation | Unknown oncogenicity for variant at index 102 in batch 1 2025-08-01 01:31:11,882 | WARNING | pyMut.annotate.actionable_mutation | Gene does not exist for variant at index 103 in batch 1 2025-08-01 01:31:11,882 | WARNING | pyMut.annotate.actionable_mutation | Unknown oncogenicity for variant at index 103 in batch 1 2025-08-01 01:31:11,883 | WARNING | pyMut.annotate.actionable_mutation | Gene does not exist for variant at index 104 in batch 1 2025-08-01 01:31:11,883 | WARNING | pyMut.annotate.actionable_mutation | Unknown oncogenicity for variant at index 104 in batch 1 2025-08-01 01:31:11,883 | WARNING | pyMut.annotate.actionable_mutation | Gene does not exist for variant at index 105 in batch 1 2025-08-01 01:31:11,883 | WARNING | pyMut.annotate.actionable_mutation | Unknown oncogenicity for variant at index 105 in batch 1 2025-08-01 01:31:11,884 | WARNING | pyMut.annotate.actionable_mutation | Gene does not exist for variant at index 106 in batch 1 2025-08-01 01:31:11,884 | WARNING | pyMut.annotate.actionable_mutation | Unknown oncogenicity for variant at index 106 in batch 1 2025-08-01 01:31:11,884 | WARNING | pyMut.annotate.actionable_mutation | Gene does not exist for variant at index 107 in batch 1 2025-08-01 01:31:11,884 | WARNING | pyMut.annotate.actionable_mutation | Unknown oncogenicity for variant at index 107 in batch 1 2025-08-01 01:31:11,885 | WARNING | pyMut.annotate.actionable_mutation | Gene does not exist for variant at index 108 in batch 1 2025-08-01 01:31:11,885 | WARNING | pyMut.annotate.actionable_mutation | Unknown oncogenicity for variant at index 108 in batch 1 2025-08-01 01:31:11,886 | WARNING | pyMut.annotate.actionable_mutation | Gene does not exist for variant at index 109 in batch 1 2025-08-01 01:31:11,887 | WARNING | pyMut.annotate.actionable_mutation | Unknown oncogenicity for variant at index 109 in batch 1 2025-08-01 01:31:11,887 | WARNING | pyMut.annotate.actionable_mutation | Gene does not exist for variant at index 110 in batch 1 2025-08-01 01:31:11,887 | WARNING | pyMut.annotate.actionable_mutation | Unknown oncogenicity for variant at index 110 in batch 1 2025-08-01 01:31:11,888 | WARNING | pyMut.annotate.actionable_mutation | Gene does not exist for variant at index 111 in batch 1 2025-08-01 01:31:11,888 | WARNING | pyMut.annotate.actionable_mutation | Unknown oncogenicity for variant at index 111 in batch 1 2025-08-01 01:31:11,888 | WARNING | pyMut.annotate.actionable_mutation | Gene does not exist for variant at index 112 in batch 1 2025-08-01 01:31:11,888 | WARNING | pyMut.annotate.actionable_mutation | Unknown oncogenicity for variant at index 112 in batch 1 2025-08-01 01:31:11,889 | WARNING | pyMut.annotate.actionable_mutation | Gene does not exist for variant at index 113 in batch 1 2025-08-01 01:31:11,889 | WARNING | pyMut.annotate.actionable_mutation | Unknown oncogenicity for variant at index 113 in batch 1 2025-08-01 01:31:11,889 | WARNING | pyMut.annotate.actionable_mutation | Gene does not exist for variant at index 114 in batch 1 2025-08-01 01:31:11,889 | WARNING | pyMut.annotate.actionable_mutation | Unknown oncogenicity for variant at index 114 in batch 1 2025-08-01 01:31:11,890 | WARNING | pyMut.annotate.actionable_mutation | Gene does not exist for variant at index 115 in batch 1 2025-08-01 01:31:11,890 | WARNING | pyMut.annotate.actionable_mutation | Unknown oncogenicity for variant at index 115 in batch 1 2025-08-01 01:31:11,891 | WARNING | pyMut.annotate.actionable_mutation | Gene does not exist for variant at index 116 in batch 1 2025-08-01 01:31:11,892 | WARNING | pyMut.annotate.actionable_mutation | Unknown oncogenicity for variant at index 116 in batch 1 2025-08-01 01:31:11,892 | WARNING | pyMut.annotate.actionable_mutation | Gene does not exist for variant at index 117 in batch 1 2025-08-01 01:31:11,892 | WARNING | pyMut.annotate.actionable_mutation | Unknown oncogenicity for variant at index 117 in batch 1 2025-08-01 01:31:11,893 | WARNING | pyMut.annotate.actionable_mutation | Gene does not exist for variant at index 118 in batch 1 2025-08-01 01:31:11,893 | WARNING | pyMut.annotate.actionable_mutation | Unknown oncogenicity for variant at index 118 in batch 1 2025-08-01 01:31:11,893 | WARNING | pyMut.annotate.actionable_mutation | Gene does not exist for variant at index 119 in batch 1 2025-08-01 01:31:11,893 | WARNING | pyMut.annotate.actionable_mutation | Unknown oncogenicity for variant at index 119 in batch 1 2025-08-01 01:31:11,894 | WARNING | pyMut.annotate.actionable_mutation | Gene does not exist for variant at index 120 in batch 1 2025-08-01 01:31:11,894 | WARNING | pyMut.annotate.actionable_mutation | Unknown oncogenicity for variant at index 120 in batch 1 2025-08-01 01:31:11,894 | WARNING | pyMut.annotate.actionable_mutation | Gene does not exist for variant at index 121 in batch 1 2025-08-01 01:31:11,895 | WARNING | pyMut.annotate.actionable_mutation | Unknown oncogenicity for variant at index 121 in batch 1 2025-08-01 01:31:11,895 | WARNING | pyMut.annotate.actionable_mutation | Gene does not exist for variant at index 122 in batch 1 2025-08-01 01:31:11,895 | WARNING | pyMut.annotate.actionable_mutation | Unknown oncogenicity for variant at index 122 in batch 1 2025-08-01 01:31:11,896 | WARNING | pyMut.annotate.actionable_mutation | Gene does not exist for variant at index 123 in batch 1 2025-08-01 01:31:11,896 | WARNING | pyMut.annotate.actionable_mutation | Unknown oncogenicity for variant at index 123 in batch 1 2025-08-01 01:31:11,897 | WARNING | pyMut.annotate.actionable_mutation | Gene does not exist for variant at index 124 in batch 1 2025-08-01 01:31:11,898 | WARNING | pyMut.annotate.actionable_mutation | Unknown oncogenicity for variant at index 124 in batch 1 2025-08-01 01:31:11,898 | WARNING | pyMut.annotate.actionable_mutation | Gene does not exist for variant at index 125 in batch 1 2025-08-01 01:31:11,898 | WARNING | pyMut.annotate.actionable_mutation | Unknown oncogenicity for variant at index 125 in batch 1 2025-08-01 01:31:11,899 | WARNING | pyMut.annotate.actionable_mutation | Gene does not exist for variant at index 126 in batch 1 2025-08-01 01:31:11,899 | WARNING | pyMut.annotate.actionable_mutation | Unknown oncogenicity for variant at index 126 in batch 1 2025-08-01 01:31:11,900 | WARNING | pyMut.annotate.actionable_mutation | Gene does not exist for variant at index 127 in batch 1 2025-08-01 01:31:11,900 | WARNING | pyMut.annotate.actionable_mutation | Unknown oncogenicity for variant at index 127 in batch 1 2025-08-01 01:31:11,900 | WARNING | pyMut.annotate.actionable_mutation | Gene does not exist for variant at index 128 in batch 1 2025-08-01 01:31:11,900 | WARNING | pyMut.annotate.actionable_mutation | Unknown oncogenicity for variant at index 128 in batch 1 2025-08-01 01:31:11,901 | WARNING | pyMut.annotate.actionable_mutation | Gene does not exist for variant at index 129 in batch 1 2025-08-01 01:31:11,901 | WARNING | pyMut.annotate.actionable_mutation | Unknown oncogenicity for variant at index 129 in batch 1 2025-08-01 01:31:11,901 | WARNING | pyMut.annotate.actionable_mutation | Gene does not exist for variant at index 130 in batch 1 2025-08-01 01:31:11,901 | WARNING | pyMut.annotate.actionable_mutation | Unknown oncogenicity for variant at index 130 in batch 1 2025-08-01 01:31:11,902 | WARNING | pyMut.annotate.actionable_mutation | Gene does not exist for variant at index 131 in batch 1 2025-08-01 01:31:11,902 | WARNING | pyMut.annotate.actionable_mutation | Unknown oncogenicity for variant at index 131 in batch 1 2025-08-01 01:31:11,902 | WARNING | pyMut.annotate.actionable_mutation | Gene does not exist for variant at index 132 in batch 1 2025-08-01 01:31:11,902 | WARNING | pyMut.annotate.actionable_mutation | Unknown oncogenicity for variant at index 132 in batch 1 2025-08-01 01:31:11,903 | WARNING | pyMut.annotate.actionable_mutation | Gene does not exist for variant at index 135 in batch 1 2025-08-01 01:31:11,903 | WARNING | pyMut.annotate.actionable_mutation | Unknown oncogenicity for variant at index 135 in batch 1 2025-08-01 01:31:11,903 | WARNING | pyMut.annotate.actionable_mutation | Gene does not exist for variant at index 136 in batch 1 2025-08-01 01:31:11,904 | WARNING | pyMut.annotate.actionable_mutation | Unknown oncogenicity for variant at index 136 in batch 1 2025-08-01 01:31:11,905 | WARNING | pyMut.annotate.actionable_mutation | Gene does not exist for variant at index 137 in batch 1 2025-08-01 01:31:11,905 | WARNING | pyMut.annotate.actionable_mutation | Unknown oncogenicity for variant at index 137 in batch 1 2025-08-01 01:31:11,905 | WARNING | pyMut.annotate.actionable_mutation | Gene does not exist for variant at index 138 in batch 1 2025-08-01 01:31:11,906 | WARNING | pyMut.annotate.actionable_mutation | Unknown oncogenicity for variant at index 138 in batch 1 2025-08-01 01:31:11,906 | WARNING | pyMut.annotate.actionable_mutation | Gene does not exist for variant at index 139 in batch 1 2025-08-01 01:31:11,906 | WARNING | pyMut.annotate.actionable_mutation | Unknown oncogenicity for variant at index 139 in batch 1 2025-08-01 01:31:11,906 | WARNING | pyMut.annotate.actionable_mutation | Unknown oncogenicity for variant at index 140 in batch 1 2025-08-01 01:31:11,908 | WARNING | pyMut.annotate.actionable_mutation | Unknown oncogenicity for variant at index 141 in batch 1 2025-08-01 01:31:11,909 | WARNING | pyMut.annotate.actionable_mutation | Gene does not exist for variant at index 143 in batch 1 2025-08-01 01:31:11,911 | WARNING | pyMut.annotate.actionable_mutation | Unknown oncogenicity for variant at index 143 in batch 1 2025-08-01 01:31:11,911 | WARNING | pyMut.annotate.actionable_mutation | Unknown oncogenicity for variant at index 144 in batch 1 2025-08-01 01:31:11,912 | WARNING | pyMut.annotate.actionable_mutation | Unknown oncogenicity for variant at index 145 in batch 1 2025-08-01 01:31:11,912 | WARNING | pyMut.annotate.actionable_mutation | Unknown oncogenicity for variant at index 146 in batch 1 2025-08-01 01:31:11,912 | WARNING | pyMut.annotate.actionable_mutation | Unknown oncogenicity for variant at index 147 in batch 1 2025-08-01 01:31:11,913 | WARNING | pyMut.annotate.actionable_mutation | Unknown oncogenicity for variant at index 148 in batch 1 2025-08-01 01:31:11,913 | WARNING | pyMut.annotate.actionable_mutation | Unknown oncogenicity for variant at index 149 in batch 1 2025-08-01 01:31:11,913 | WARNING | pyMut.annotate.actionable_mutation | Gene does not exist for variant at index 150 in batch 1 2025-08-01 01:31:11,914 | WARNING | pyMut.annotate.actionable_mutation | Unknown oncogenicity for variant at index 150 in batch 1 2025-08-01 01:31:11,914 | WARNING | pyMut.annotate.actionable_mutation | Gene does not exist for variant at index 151 in batch 1 2025-08-01 01:31:11,914 | WARNING | pyMut.annotate.actionable_mutation | Unknown oncogenicity for variant at index 151 in batch 1 2025-08-01 01:31:11,915 | WARNING | pyMut.annotate.actionable_mutation | Gene does not exist for variant at index 152 in batch 1 2025-08-01 01:31:11,915 | WARNING | pyMut.annotate.actionable_mutation | Unknown oncogenicity for variant at index 152 in batch 1 2025-08-01 01:31:11,915 | WARNING | pyMut.annotate.actionable_mutation | Gene does not exist for variant at index 153 in batch 1 2025-08-01 01:31:11,916 | WARNING | pyMut.annotate.actionable_mutation | Unknown oncogenicity for variant at index 153 in batch 1 2025-08-01 01:31:11,916 | WARNING | pyMut.annotate.actionable_mutation | Gene does not exist for variant at index 154 in batch 1 2025-08-01 01:31:11,916 | WARNING | pyMut.annotate.actionable_mutation | Unknown oncogenicity for variant at index 154 in batch 1 2025-08-01 01:31:11,916 | WARNING | pyMut.annotate.actionable_mutation | Unknown oncogenicity for variant at index 155 in batch 1 2025-08-01 01:31:11,917 | WARNING | pyMut.annotate.actionable_mutation | Gene does not exist for variant at index 157 in batch 1 2025-08-01 01:31:11,917 | WARNING | pyMut.annotate.actionable_mutation | Unknown oncogenicity for variant at index 157 in batch 1 2025-08-01 01:31:11,917 | WARNING | pyMut.annotate.actionable_mutation | Gene does not exist for variant at index 158 in batch 1 2025-08-01 01:31:11,917 | WARNING | pyMut.annotate.actionable_mutation | Unknown oncogenicity for variant at index 158 in batch 1 2025-08-01 01:31:11,918 | WARNING | pyMut.annotate.actionable_mutation | Gene does not exist for variant at index 159 in batch 1 2025-08-01 01:31:11,918 | WARNING | pyMut.annotate.actionable_mutation | Unknown oncogenicity for variant at index 159 in batch 1 2025-08-01 01:31:11,918 | WARNING | pyMut.annotate.actionable_mutation | Gene does not exist for variant at index 160 in batch 1 2025-08-01 01:31:11,919 | WARNING | pyMut.annotate.actionable_mutation | Unknown oncogenicity for variant at index 160 in batch 1 2025-08-01 01:31:11,920 | WARNING | pyMut.annotate.actionable_mutation | Gene does not exist for variant at index 161 in batch 1 2025-08-01 01:31:11,920 | WARNING | pyMut.annotate.actionable_mutation | Unknown oncogenicity for variant at index 161 in batch 1 2025-08-01 01:31:11,920 | WARNING | pyMut.annotate.actionable_mutation | Gene does not exist for variant at index 162 in batch 1 2025-08-01 01:31:11,921 | WARNING | pyMut.annotate.actionable_mutation | Unknown oncogenicity for variant at index 162 in batch 1 2025-08-01 01:31:11,922 | WARNING | pyMut.annotate.actionable_mutation | Gene does not exist for variant at index 163 in batch 1 2025-08-01 01:31:11,922 | WARNING | pyMut.annotate.actionable_mutation | Unknown oncogenicity for variant at index 163 in batch 1 2025-08-01 01:31:11,923 | WARNING | pyMut.annotate.actionable_mutation | Gene does not exist for variant at index 164 in batch 1 2025-08-01 01:31:11,924 | WARNING | pyMut.annotate.actionable_mutation | Unknown oncogenicity for variant at index 164 in batch 1 2025-08-01 01:31:11,924 | WARNING | pyMut.annotate.actionable_mutation | Gene does not exist for variant at index 165 in batch 1 2025-08-01 01:31:11,924 | WARNING | pyMut.annotate.actionable_mutation | Unknown oncogenicity for variant at index 165 in batch 1 2025-08-01 01:31:11,925 | WARNING | pyMut.annotate.actionable_mutation | Gene does not exist for variant at index 166 in batch 1 2025-08-01 01:31:11,925 | WARNING | pyMut.annotate.actionable_mutation | Unknown oncogenicity for variant at index 166 in batch 1 2025-08-01 01:31:11,926 | WARNING | pyMut.annotate.actionable_mutation | Gene does not exist for variant at index 167 in batch 1 2025-08-01 01:31:11,926 | WARNING | pyMut.annotate.actionable_mutation | Unknown oncogenicity for variant at index 167 in batch 1 2025-08-01 01:31:11,926 | WARNING | pyMut.annotate.actionable_mutation | Gene does not exist for variant at index 168 in batch 1 2025-08-01 01:31:11,927 | WARNING | pyMut.annotate.actionable_mutation | Unknown oncogenicity for variant at index 168 in batch 1 2025-08-01 01:31:11,927 | WARNING | pyMut.annotate.actionable_mutation | Gene does not exist for variant at index 169 in batch 1 2025-08-01 01:31:11,927 | WARNING | pyMut.annotate.actionable_mutation | Unknown oncogenicity for variant at index 169 in batch 1 2025-08-01 01:31:11,928 | WARNING | pyMut.annotate.actionable_mutation | Gene does not exist for variant at index 170 in batch 1 2025-08-01 01:31:11,928 | WARNING | pyMut.annotate.actionable_mutation | Unknown oncogenicity for variant at index 170 in batch 1 2025-08-01 01:31:11,928 | WARNING | pyMut.annotate.actionable_mutation | Gene does not exist for variant at index 171 in batch 1 2025-08-01 01:31:11,929 | WARNING | pyMut.annotate.actionable_mutation | Unknown oncogenicity for variant at index 171 in batch 1 2025-08-01 01:31:11,929 | WARNING | pyMut.annotate.actionable_mutation | Gene does not exist for variant at index 172 in batch 1 2025-08-01 01:31:11,929 | WARNING | pyMut.annotate.actionable_mutation | Unknown oncogenicity for variant at index 172 in batch 1 2025-08-01 01:31:11,930 | WARNING | pyMut.annotate.actionable_mutation | Gene does not exist for variant at index 173 in batch 1 2025-08-01 01:31:11,930 | WARNING | pyMut.annotate.actionable_mutation | Unknown oncogenicity for variant at index 173 in batch 1 2025-08-01 01:31:11,930 | WARNING | pyMut.annotate.actionable_mutation | Gene does not exist for variant at index 174 in batch 1 2025-08-01 01:31:11,931 | WARNING | pyMut.annotate.actionable_mutation | Unknown oncogenicity for variant at index 174 in batch 1 2025-08-01 01:31:11,931 | WARNING | pyMut.annotate.actionable_mutation | Gene does not exist for variant at index 175 in batch 1 2025-08-01 01:31:11,931 | WARNING | pyMut.annotate.actionable_mutation | Unknown oncogenicity for variant at index 175 in batch 1 2025-08-01 01:31:11,932 | WARNING | pyMut.annotate.actionable_mutation | Gene does not exist for variant at index 176 in batch 1 2025-08-01 01:31:11,932 | WARNING | pyMut.annotate.actionable_mutation | Unknown oncogenicity for variant at index 176 in batch 1 2025-08-01 01:31:11,932 | WARNING | pyMut.annotate.actionable_mutation | Gene does not exist for variant at index 177 in batch 1 2025-08-01 01:31:11,932 | WARNING | pyMut.annotate.actionable_mutation | Unknown oncogenicity for variant at index 177 in batch 1 2025-08-01 01:31:11,933 | WARNING | pyMut.annotate.actionable_mutation | Gene does not exist for variant at index 178 in batch 1 2025-08-01 01:31:11,933 | WARNING | pyMut.annotate.actionable_mutation | Unknown oncogenicity for variant at index 178 in batch 1 2025-08-01 01:31:11,933 | WARNING | pyMut.annotate.actionable_mutation | Gene does not exist for variant at index 179 in batch 1 2025-08-01 01:31:11,934 | WARNING | pyMut.annotate.actionable_mutation | Unknown oncogenicity for variant at index 179 in batch 1 2025-08-01 01:31:11,934 | WARNING | pyMut.annotate.actionable_mutation | Gene does not exist for variant at index 180 in batch 1 2025-08-01 01:31:11,934 | WARNING | pyMut.annotate.actionable_mutation | Unknown oncogenicity for variant at index 180 in batch 1 2025-08-01 01:31:11,935 | WARNING | pyMut.annotate.actionable_mutation | Gene does not exist for variant at index 181 in batch 1 2025-08-01 01:31:11,935 | WARNING | pyMut.annotate.actionable_mutation | Unknown oncogenicity for variant at index 181 in batch 1 2025-08-01 01:31:11,935 | WARNING | pyMut.annotate.actionable_mutation | Gene does not exist for variant at index 182 in batch 1 2025-08-01 01:31:11,935 | WARNING | pyMut.annotate.actionable_mutation | Unknown oncogenicity for variant at index 182 in batch 1 2025-08-01 01:31:11,936 | WARNING | pyMut.annotate.actionable_mutation | Gene does not exist for variant at index 183 in batch 1 2025-08-01 01:31:11,936 | WARNING | pyMut.annotate.actionable_mutation | Unknown oncogenicity for variant at index 183 in batch 1 2025-08-01 01:31:11,936 | WARNING | pyMut.annotate.actionable_mutation | Gene does not exist for variant at index 184 in batch 1 2025-08-01 01:31:11,936 | WARNING | pyMut.annotate.actionable_mutation | Unknown oncogenicity for variant at index 184 in batch 1 2025-08-01 01:31:11,937 | WARNING | pyMut.annotate.actionable_mutation | Unknown oncogenicity for variant at index 185 in batch 1 2025-08-01 01:31:11,937 | WARNING | pyMut.annotate.actionable_mutation | Gene does not exist for variant at index 186 in batch 1 2025-08-01 01:31:11,937 | WARNING | pyMut.annotate.actionable_mutation | Unknown oncogenicity for variant at index 186 in batch 1 2025-08-01 01:31:11,938 | WARNING | pyMut.annotate.actionable_mutation | Unknown oncogenicity for variant at index 187 in batch 1 2025-08-01 01:31:11,938 | WARNING | pyMut.annotate.actionable_mutation | Gene does not exist for variant at index 188 in batch 1 2025-08-01 01:31:11,938 | WARNING | pyMut.annotate.actionable_mutation | Unknown oncogenicity for variant at index 188 in batch 1 2025-08-01 01:31:11,939 | WARNING | pyMut.annotate.actionable_mutation | Gene does not exist for variant at index 189 in batch 1 2025-08-01 01:31:11,939 | WARNING | pyMut.annotate.actionable_mutation | Unknown oncogenicity for variant at index 189 in batch 1 2025-08-01 01:31:11,941 | WARNING | pyMut.annotate.actionable_mutation | Gene does not exist for variant at index 190 in batch 1 2025-08-01 01:31:11,942 | WARNING | pyMut.annotate.actionable_mutation | Unknown oncogenicity for variant at index 190 in batch 1 2025-08-01 01:31:11,942 | WARNING | pyMut.annotate.actionable_mutation | Gene does not exist for variant at index 191 in batch 1 2025-08-01 01:31:11,942 | WARNING | pyMut.annotate.actionable_mutation | Unknown oncogenicity for variant at index 191 in batch 1 2025-08-01 01:31:11,943 | WARNING | pyMut.annotate.actionable_mutation | Gene does not exist for variant at index 192 in batch 1 2025-08-01 01:31:11,943 | WARNING | pyMut.annotate.actionable_mutation | Unknown oncogenicity for variant at index 192 in batch 1 2025-08-01 01:31:11,943 | WARNING | pyMut.annotate.actionable_mutation | Gene does not exist for variant at index 193 in batch 1 2025-08-01 01:31:11,944 | WARNING | pyMut.annotate.actionable_mutation | Unknown oncogenicity for variant at index 193 in batch 1 2025-08-01 01:31:11,944 | WARNING | pyMut.annotate.actionable_mutation | Gene does not exist for variant at index 194 in batch 1 2025-08-01 01:31:11,944 | WARNING | pyMut.annotate.actionable_mutation | Unknown oncogenicity for variant at index 194 in batch 1 2025-08-01 01:31:11,945 | WARNING | pyMut.annotate.actionable_mutation | Gene does not exist for variant at index 195 in batch 1 2025-08-01 01:31:11,945 | WARNING | pyMut.annotate.actionable_mutation | Unknown oncogenicity for variant at index 195 in batch 1 2025-08-01 01:31:11,945 | WARNING | pyMut.annotate.actionable_mutation | Gene does not exist for variant at index 196 in batch 1 2025-08-01 01:31:11,945 | WARNING | pyMut.annotate.actionable_mutation | Unknown oncogenicity for variant at index 196 in batch 1 2025-08-01 01:31:11,946 | WARNING | pyMut.annotate.actionable_mutation | Gene does not exist for variant at index 197 in batch 1 2025-08-01 01:31:11,946 | WARNING | pyMut.annotate.actionable_mutation | Unknown oncogenicity for variant at index 197 in batch 1 2025-08-01 01:31:11,947 | WARNING | pyMut.annotate.actionable_mutation | Gene does not exist for variant at index 198 in batch 1 2025-08-01 01:31:11,947 | WARNING | pyMut.annotate.actionable_mutation | Unknown oncogenicity for variant at index 198 in batch 1 2025-08-01 01:31:11,947 | WARNING | pyMut.annotate.actionable_mutation | Gene does not exist for variant at index 199 in batch 1 2025-08-01 01:31:11,947 | WARNING | pyMut.annotate.actionable_mutation | Unknown oncogenicity for variant at index 199 in batch 1 2025-08-01 01:31:11,947 | WARNING | pyMut.annotate.actionable_mutation | Gene does not exist for variant at index 201 in batch 1 2025-08-01 01:31:11,948 | WARNING | pyMut.annotate.actionable_mutation | Unknown oncogenicity for variant at index 201 in batch 1 2025-08-01 01:31:11,948 | WARNING | pyMut.annotate.actionable_mutation | Gene does not exist for variant at index 202 in batch 1 2025-08-01 01:31:11,949 | WARNING | pyMut.annotate.actionable_mutation | Unknown oncogenicity for variant at index 202 in batch 1 2025-08-01 01:31:11,949 | WARNING | pyMut.annotate.actionable_mutation | Gene does not exist for variant at index 203 in batch 1 2025-08-01 01:31:11,949 | WARNING | pyMut.annotate.actionable_mutation | Unknown oncogenicity for variant at index 203 in batch 1 2025-08-01 01:31:11,950 | WARNING | pyMut.annotate.actionable_mutation | Gene does not exist for variant at index 204 in batch 1 2025-08-01 01:31:11,950 | WARNING | pyMut.annotate.actionable_mutation | Unknown oncogenicity for variant at index 204 in batch 1 2025-08-01 01:31:11,950 | WARNING | pyMut.annotate.actionable_mutation | Gene does not exist for variant at index 205 in batch 1 2025-08-01 01:31:11,950 | WARNING | pyMut.annotate.actionable_mutation | Unknown oncogenicity for variant at index 205 in batch 1 2025-08-01 01:31:11,951 | WARNING | pyMut.annotate.actionable_mutation | Gene does not exist for variant at index 206 in batch 1 2025-08-01 01:31:11,951 | WARNING | pyMut.annotate.actionable_mutation | Unknown oncogenicity for variant at index 206 in batch 1 2025-08-01 01:31:11,952 | WARNING | pyMut.annotate.actionable_mutation | Gene does not exist for variant at index 207 in batch 1 2025-08-01 01:31:11,952 | WARNING | pyMut.annotate.actionable_mutation | Unknown oncogenicity for variant at index 207 in batch 1 2025-08-01 01:31:11,952 | WARNING | pyMut.annotate.actionable_mutation | Gene does not exist for variant at index 208 in batch 1 2025-08-01 01:31:11,953 | WARNING | pyMut.annotate.actionable_mutation | Unknown oncogenicity for variant at index 208 in batch 1 2025-08-01 01:31:11,953 | WARNING | pyMut.annotate.actionable_mutation | Gene does not exist for variant at index 209 in batch 1 2025-08-01 01:31:11,954 | WARNING | pyMut.annotate.actionable_mutation | Unknown oncogenicity for variant at index 209 in batch 1 2025-08-01 01:31:11,954 | WARNING | pyMut.annotate.actionable_mutation | Gene does not exist for variant at index 210 in batch 1 2025-08-01 01:31:11,955 | WARNING | pyMut.annotate.actionable_mutation | Unknown oncogenicity for variant at index 210 in batch 1 2025-08-01 01:31:11,955 | WARNING | pyMut.annotate.actionable_mutation | Gene does not exist for variant at index 211 in batch 1 2025-08-01 01:31:11,955 | WARNING | pyMut.annotate.actionable_mutation | Unknown oncogenicity for variant at index 211 in batch 1 2025-08-01 01:31:11,955 | WARNING | pyMut.annotate.actionable_mutation | Gene does not exist for variant at index 212 in batch 1 2025-08-01 01:31:11,955 | WARNING | pyMut.annotate.actionable_mutation | Unknown oncogenicity for variant at index 212 in batch 1 2025-08-01 01:31:11,956 | WARNING | pyMut.annotate.actionable_mutation | Gene does not exist for variant at index 213 in batch 1 2025-08-01 01:31:11,956 | WARNING | pyMut.annotate.actionable_mutation | Unknown oncogenicity for variant at index 213 in batch 1 2025-08-01 01:31:11,956 | WARNING | pyMut.annotate.actionable_mutation | Gene does not exist for variant at index 214 in batch 1 2025-08-01 01:31:11,957 | WARNING | pyMut.annotate.actionable_mutation | Unknown oncogenicity for variant at index 214 in batch 1 2025-08-01 01:31:11,957 | WARNING | pyMut.annotate.actionable_mutation | Gene does not exist for variant at index 215 in batch 1 2025-08-01 01:31:11,957 | WARNING | pyMut.annotate.actionable_mutation | Unknown oncogenicity for variant at index 215 in batch 1 2025-08-01 01:31:11,957 | WARNING | pyMut.annotate.actionable_mutation | Gene does not exist for variant at index 216 in batch 1 2025-08-01 01:31:11,958 | WARNING | pyMut.annotate.actionable_mutation | Unknown oncogenicity for variant at index 216 in batch 1 2025-08-01 01:31:11,959 | WARNING | pyMut.annotate.actionable_mutation | Gene does not exist for variant at index 217 in batch 1 2025-08-01 01:31:11,959 | WARNING | pyMut.annotate.actionable_mutation | Unknown oncogenicity for variant at index 217 in batch 1 2025-08-01 01:31:11,959 | WARNING | pyMut.annotate.actionable_mutation | Unknown oncogenicity for variant at index 218 in batch 1 2025-08-01 01:31:11,959 | WARNING | pyMut.annotate.actionable_mutation | Gene does not exist for variant at index 219 in batch 1 2025-08-01 01:31:11,960 | WARNING | pyMut.annotate.actionable_mutation | Unknown oncogenicity for variant at index 219 in batch 1 2025-08-01 01:31:11,960 | WARNING | pyMut.annotate.actionable_mutation | Gene does not exist for variant at index 220 in batch 1 2025-08-01 01:31:11,960 | WARNING | pyMut.annotate.actionable_mutation | Unknown oncogenicity for variant at index 220 in batch 1 2025-08-01 01:31:11,961 | WARNING | pyMut.annotate.actionable_mutation | Gene does not exist for variant at index 221 in batch 1 2025-08-01 01:31:11,961 | WARNING | pyMut.annotate.actionable_mutation | Unknown oncogenicity for variant at index 221 in batch 1 2025-08-01 01:31:11,961 | WARNING | pyMut.annotate.actionable_mutation | Gene does not exist for variant at index 222 in batch 1 2025-08-01 01:31:11,961 | WARNING | pyMut.annotate.actionable_mutation | Unknown oncogenicity for variant at index 222 in batch 1 2025-08-01 01:31:11,962 | WARNING | pyMut.annotate.actionable_mutation | Gene does not exist for variant at index 223 in batch 1 2025-08-01 01:31:11,962 | WARNING | pyMut.annotate.actionable_mutation | Unknown oncogenicity for variant at index 223 in batch 1 2025-08-01 01:31:11,963 | WARNING | pyMut.annotate.actionable_mutation | Gene does not exist for variant at index 224 in batch 1 2025-08-01 01:31:11,963 | WARNING | pyMut.annotate.actionable_mutation | Unknown oncogenicity for variant at index 224 in batch 1 2025-08-01 01:31:11,963 | WARNING | pyMut.annotate.actionable_mutation | Gene does not exist for variant at index 225 in batch 1 2025-08-01 01:31:11,964 | WARNING | pyMut.annotate.actionable_mutation | Unknown oncogenicity for variant at index 225 in batch 1 2025-08-01 01:31:11,964 | WARNING | pyMut.annotate.actionable_mutation | Gene does not exist for variant at index 226 in batch 1 2025-08-01 01:31:11,964 | WARNING | pyMut.annotate.actionable_mutation | Unknown oncogenicity for variant at index 226 in batch 1 2025-08-01 01:31:11,965 | WARNING | pyMut.annotate.actionable_mutation | Gene does not exist for variant at index 227 in batch 1 2025-08-01 01:31:11,965 | WARNING | pyMut.annotate.actionable_mutation | Unknown oncogenicity for variant at index 227 in batch 1 2025-08-01 01:31:11,965 | WARNING | pyMut.annotate.actionable_mutation | Gene does not exist for variant at index 228 in batch 1 2025-08-01 01:31:11,965 | WARNING | pyMut.annotate.actionable_mutation | Unknown oncogenicity for variant at index 228 in batch 1 2025-08-01 01:31:11,966 | WARNING | pyMut.annotate.actionable_mutation | Gene does not exist for variant at index 229 in batch 1 2025-08-01 01:31:11,966 | WARNING | pyMut.annotate.actionable_mutation | Unknown oncogenicity for variant at index 229 in batch 1 2025-08-01 01:31:11,966 | WARNING | pyMut.annotate.actionable_mutation | Gene does not exist for variant at index 230 in batch 1 2025-08-01 01:31:11,966 | WARNING | pyMut.annotate.actionable_mutation | Unknown oncogenicity for variant at index 230 in batch 1 2025-08-01 01:31:11,967 | WARNING | pyMut.annotate.actionable_mutation | Gene does not exist for variant at index 231 in batch 1 2025-08-01 01:31:11,967 | WARNING | pyMut.annotate.actionable_mutation | Unknown oncogenicity for variant at index 231 in batch 1 2025-08-01 01:31:11,967 | WARNING | pyMut.annotate.actionable_mutation | Gene does not exist for variant at index 232 in batch 1 2025-08-01 01:31:11,968 | WARNING | pyMut.annotate.actionable_mutation | Unknown oncogenicity for variant at index 232 in batch 1 2025-08-01 01:31:11,968 | WARNING | pyMut.annotate.actionable_mutation | Gene does not exist for variant at index 233 in batch 1 2025-08-01 01:31:11,968 | WARNING | pyMut.annotate.actionable_mutation | Unknown oncogenicity for variant at index 233 in batch 1 2025-08-01 01:31:11,968 | WARNING | pyMut.annotate.actionable_mutation | Gene does not exist for variant at index 234 in batch 1 2025-08-01 01:31:11,969 | WARNING | pyMut.annotate.actionable_mutation | Unknown oncogenicity for variant at index 234 in batch 1 2025-08-01 01:31:11,969 | WARNING | pyMut.annotate.actionable_mutation | Gene does not exist for variant at index 235 in batch 1 2025-08-01 01:31:11,969 | WARNING | pyMut.annotate.actionable_mutation | Unknown oncogenicity for variant at index 235 in batch 1 2025-08-01 01:31:11,970 | WARNING | pyMut.annotate.actionable_mutation | Gene does not exist for variant at index 236 in batch 1 2025-08-01 01:31:11,970 | WARNING | pyMut.annotate.actionable_mutation | Unknown oncogenicity for variant at index 236 in batch 1 2025-08-01 01:31:11,971 | WARNING | pyMut.annotate.actionable_mutation | Unknown oncogenicity for variant at index 237 in batch 1 2025-08-01 01:31:11,971 | WARNING | pyMut.annotate.actionable_mutation | Unknown oncogenicity for variant at index 238 in batch 1 2025-08-01 01:31:11,971 | WARNING | pyMut.annotate.actionable_mutation | Unknown oncogenicity for variant at index 239 in batch 1 2025-08-01 01:31:11,971 | WARNING | pyMut.annotate.actionable_mutation | Gene does not exist for variant at index 240 in batch 1 2025-08-01 01:31:11,972 | WARNING | pyMut.annotate.actionable_mutation | Unknown oncogenicity for variant at index 240 in batch 1 2025-08-01 01:31:11,972 | WARNING | pyMut.annotate.actionable_mutation | Gene does not exist for variant at index 241 in batch 1 2025-08-01 01:31:11,972 | WARNING | pyMut.annotate.actionable_mutation | Unknown oncogenicity for variant at index 241 in batch 1 2025-08-01 01:31:11,972 | WARNING | pyMut.annotate.actionable_mutation | Gene does not exist for variant at index 242 in batch 1 2025-08-01 01:31:11,973 | WARNING | pyMut.annotate.actionable_mutation | Unknown oncogenicity for variant at index 242 in batch 1 2025-08-01 01:31:11,973 | WARNING | pyMut.annotate.actionable_mutation | Gene does not exist for variant at index 243 in batch 1 2025-08-01 01:31:11,973 | WARNING | pyMut.annotate.actionable_mutation | Unknown oncogenicity for variant at index 243 in batch 1 2025-08-01 01:31:11,973 | WARNING | pyMut.annotate.actionable_mutation | Gene does not exist for variant at index 244 in batch 1 2025-08-01 01:31:11,974 | WARNING | pyMut.annotate.actionable_mutation | Unknown oncogenicity for variant at index 244 in batch 1 2025-08-01 01:31:11,974 | WARNING | pyMut.annotate.actionable_mutation | Gene does not exist for variant at index 245 in batch 1 2025-08-01 01:31:11,974 | WARNING | pyMut.annotate.actionable_mutation | Unknown oncogenicity for variant at index 245 in batch 1 2025-08-01 01:31:11,975 | WARNING | pyMut.annotate.actionable_mutation | Gene does not exist for variant at index 246 in batch 1 2025-08-01 01:31:11,975 | WARNING | pyMut.annotate.actionable_mutation | Unknown oncogenicity for variant at index 246 in batch 1 2025-08-01 01:31:11,976 | WARNING | pyMut.annotate.actionable_mutation | Gene does not exist for variant at index 247 in batch 1 2025-08-01 01:31:11,976 | WARNING | pyMut.annotate.actionable_mutation | Unknown oncogenicity for variant at index 247 in batch 1 2025-08-01 01:31:11,976 | WARNING | pyMut.annotate.actionable_mutation | Gene does not exist for variant at index 248 in batch 1 2025-08-01 01:31:11,977 | WARNING | pyMut.annotate.actionable_mutation | Unknown oncogenicity for variant at index 248 in batch 1 2025-08-01 01:31:11,977 | WARNING | pyMut.annotate.actionable_mutation | Gene does not exist for variant at index 249 in batch 1 2025-08-01 01:31:11,977 | WARNING | pyMut.annotate.actionable_mutation | Unknown oncogenicity for variant at index 249 in batch 1 2025-08-01 01:31:11,978 | WARNING | pyMut.annotate.actionable_mutation | Gene does not exist for variant at index 250 in batch 1 2025-08-01 01:31:11,978 | WARNING | pyMut.annotate.actionable_mutation | Unknown oncogenicity for variant at index 250 in batch 1 2025-08-01 01:31:11,978 | WARNING | pyMut.annotate.actionable_mutation | Gene does not exist for variant at index 251 in batch 1 2025-08-01 01:31:11,978 | WARNING | pyMut.annotate.actionable_mutation | Unknown oncogenicity for variant at index 251 in batch 1 2025-08-01 01:31:11,979 | WARNING | pyMut.annotate.actionable_mutation | Gene does not exist for variant at index 252 in batch 1 2025-08-01 01:31:11,979 | WARNING | pyMut.annotate.actionable_mutation | Unknown oncogenicity for variant at index 252 in batch 1 2025-08-01 01:31:11,979 | WARNING | pyMut.annotate.actionable_mutation | Gene does not exist for variant at index 253 in batch 1 2025-08-01 01:31:11,980 | WARNING | pyMut.annotate.actionable_mutation | Unknown oncogenicity for variant at index 253 in batch 1 2025-08-01 01:31:11,980 | WARNING | pyMut.annotate.actionable_mutation | Gene does not exist for variant at index 254 in batch 1 2025-08-01 01:31:11,980 | WARNING | pyMut.annotate.actionable_mutation | Unknown oncogenicity for variant at index 254 in batch 1 2025-08-01 01:31:11,981 | WARNING | pyMut.annotate.actionable_mutation | Gene does not exist for variant at index 255 in batch 1 2025-08-01 01:31:11,981 | WARNING | pyMut.annotate.actionable_mutation | Unknown oncogenicity for variant at index 255 in batch 1 2025-08-01 01:31:11,981 | WARNING | pyMut.annotate.actionable_mutation | Gene does not exist for variant at index 256 in batch 1 2025-08-01 01:31:11,982 | WARNING | pyMut.annotate.actionable_mutation | Unknown oncogenicity for variant at index 256 in batch 1 2025-08-01 01:31:11,982 | WARNING | pyMut.annotate.actionable_mutation | Gene does not exist for variant at index 257 in batch 1 2025-08-01 01:31:11,983 | WARNING | pyMut.annotate.actionable_mutation | Unknown oncogenicity for variant at index 257 in batch 1 2025-08-01 01:31:11,983 | WARNING | pyMut.annotate.actionable_mutation | Gene does not exist for variant at index 258 in batch 1 2025-08-01 01:31:11,983 | WARNING | pyMut.annotate.actionable_mutation | Unknown oncogenicity for variant at index 258 in batch 1 2025-08-01 01:31:11,984 | WARNING | pyMut.annotate.actionable_mutation | Gene does not exist for variant at index 259 in batch 1 2025-08-01 01:31:11,984 | WARNING | pyMut.annotate.actionable_mutation | Unknown oncogenicity for variant at index 259 in batch 1 2025-08-01 01:31:11,985 | WARNING | pyMut.annotate.actionable_mutation | Gene does not exist for variant at index 260 in batch 1 2025-08-01 01:31:11,985 | WARNING | pyMut.annotate.actionable_mutation | Unknown oncogenicity for variant at index 260 in batch 1 2025-08-01 01:31:11,985 | WARNING | pyMut.annotate.actionable_mutation | Gene does not exist for variant at index 261 in batch 1 2025-08-01 01:31:11,986 | WARNING | pyMut.annotate.actionable_mutation | Unknown oncogenicity for variant at index 261 in batch 1 2025-08-01 01:31:11,986 | WARNING | pyMut.annotate.actionable_mutation | Gene does not exist for variant at index 262 in batch 1 2025-08-01 01:31:11,986 | WARNING | pyMut.annotate.actionable_mutation | Unknown oncogenicity for variant at index 262 in batch 1 2025-08-01 01:31:11,986 | WARNING | pyMut.annotate.actionable_mutation | Gene does not exist for variant at index 263 in batch 1 2025-08-01 01:31:11,986 | WARNING | pyMut.annotate.actionable_mutation | Unknown oncogenicity for variant at index 263 in batch 1 2025-08-01 01:31:11,987 | WARNING | pyMut.annotate.actionable_mutation | Gene does not exist for variant at index 264 in batch 1 2025-08-01 01:31:11,987 | WARNING | pyMut.annotate.actionable_mutation | Unknown oncogenicity for variant at index 264 in batch 1 2025-08-01 01:31:11,988 | WARNING | pyMut.annotate.actionable_mutation | Gene does not exist for variant at index 265 in batch 1 2025-08-01 01:31:11,988 | WARNING | pyMut.annotate.actionable_mutation | Unknown oncogenicity for variant at index 265 in batch 1 2025-08-01 01:31:11,988 | WARNING | pyMut.annotate.actionable_mutation | Gene does not exist for variant at index 266 in batch 1 2025-08-01 01:31:11,988 | WARNING | pyMut.annotate.actionable_mutation | Unknown oncogenicity for variant at index 266 in batch 1 2025-08-01 01:31:11,989 | WARNING | pyMut.annotate.actionable_mutation | Gene does not exist for variant at index 268 in batch 1 2025-08-01 01:31:11,989 | WARNING | pyMut.annotate.actionable_mutation | Unknown oncogenicity for variant at index 268 in batch 1 2025-08-01 01:31:11,989 | WARNING | pyMut.annotate.actionable_mutation | Gene does not exist for variant at index 269 in batch 1 2025-08-01 01:31:11,990 | WARNING | pyMut.annotate.actionable_mutation | Unknown oncogenicity for variant at index 269 in batch 1 2025-08-01 01:31:11,990 | WARNING | pyMut.annotate.actionable_mutation | Gene does not exist for variant at index 270 in batch 1 2025-08-01 01:31:11,991 | WARNING | pyMut.annotate.actionable_mutation | Unknown oncogenicity for variant at index 270 in batch 1 2025-08-01 01:31:11,991 | WARNING | pyMut.annotate.actionable_mutation | Gene does not exist for variant at index 271 in batch 1 2025-08-01 01:31:11,991 | WARNING | pyMut.annotate.actionable_mutation | Unknown oncogenicity for variant at index 271 in batch 1 2025-08-01 01:31:11,991 | WARNING | pyMut.annotate.actionable_mutation | Gene does not exist for variant at index 272 in batch 1 2025-08-01 01:31:11,992 | WARNING | pyMut.annotate.actionable_mutation | Unknown oncogenicity for variant at index 272 in batch 1 2025-08-01 01:31:11,992 | WARNING | pyMut.annotate.actionable_mutation | Gene does not exist for variant at index 273 in batch 1 2025-08-01 01:31:11,992 | WARNING | pyMut.annotate.actionable_mutation | Unknown oncogenicity for variant at index 273 in batch 1 2025-08-01 01:31:11,992 | WARNING | pyMut.annotate.actionable_mutation | Gene does not exist for variant at index 274 in batch 1 2025-08-01 01:31:11,992 | WARNING | pyMut.annotate.actionable_mutation | Unknown oncogenicity for variant at index 274 in batch 1 2025-08-01 01:31:11,993 | WARNING | pyMut.annotate.actionable_mutation | Gene does not exist for variant at index 279 in batch 1 2025-08-01 01:31:11,993 | WARNING | pyMut.annotate.actionable_mutation | Unknown oncogenicity for variant at index 279 in batch 1 2025-08-01 01:31:11,993 | WARNING | pyMut.annotate.actionable_mutation | Gene does not exist for variant at index 280 in batch 1 2025-08-01 01:31:11,994 | WARNING | pyMut.annotate.actionable_mutation | Unknown oncogenicity for variant at index 280 in batch 1 2025-08-01 01:31:11,994 | WARNING | pyMut.annotate.actionable_mutation | Gene does not exist for variant at index 281 in batch 1 2025-08-01 01:31:11,994 | WARNING | pyMut.annotate.actionable_mutation | Unknown oncogenicity for variant at index 281 in batch 1 2025-08-01 01:31:11,994 | WARNING | pyMut.annotate.actionable_mutation | Gene does not exist for variant at index 282 in batch 1 2025-08-01 01:31:11,995 | WARNING | pyMut.annotate.actionable_mutation | Unknown oncogenicity for variant at index 282 in batch 1 2025-08-01 01:31:11,995 | WARNING | pyMut.annotate.actionable_mutation | Gene does not exist for variant at index 283 in batch 1 2025-08-01 01:31:11,996 | WARNING | pyMut.annotate.actionable_mutation | Unknown oncogenicity for variant at index 283 in batch 1 2025-08-01 01:31:11,996 | WARNING | pyMut.annotate.actionable_mutation | Gene does not exist for variant at index 284 in batch 1 2025-08-01 01:31:11,996 | WARNING | pyMut.annotate.actionable_mutation | Unknown oncogenicity for variant at index 284 in batch 1 2025-08-01 01:31:11,996 | WARNING | pyMut.annotate.actionable_mutation | Gene does not exist for variant at index 285 in batch 1 2025-08-01 01:31:11,997 | WARNING | pyMut.annotate.actionable_mutation | Unknown oncogenicity for variant at index 285 in batch 1 2025-08-01 01:31:11,997 | WARNING | pyMut.annotate.actionable_mutation | Gene does not exist for variant at index 286 in batch 1 2025-08-01 01:31:11,997 | WARNING | pyMut.annotate.actionable_mutation | Unknown oncogenicity for variant at index 286 in batch 1 2025-08-01 01:31:11,998 | WARNING | pyMut.annotate.actionable_mutation | Gene does not exist for variant at index 287 in batch 1 2025-08-01 01:31:11,998 | WARNING | pyMut.annotate.actionable_mutation | Unknown oncogenicity for variant at index 287 in batch 1 2025-08-01 01:31:11,998 | WARNING | pyMut.annotate.actionable_mutation | Gene does not exist for variant at index 288 in batch 1 2025-08-01 01:31:11,998 | WARNING | pyMut.annotate.actionable_mutation | Unknown oncogenicity for variant at index 288 in batch 1 2025-08-01 01:31:12,000 | WARNING | pyMut.annotate.actionable_mutation | Gene does not exist for variant at index 289 in batch 1 2025-08-01 01:31:12,000 | WARNING | pyMut.annotate.actionable_mutation | Unknown oncogenicity for variant at index 289 in batch 1 2025-08-01 01:31:12,000 | WARNING | pyMut.annotate.actionable_mutation | Gene does not exist for variant at index 290 in batch 1 2025-08-01 01:31:12,000 | WARNING | pyMut.annotate.actionable_mutation | Unknown oncogenicity for variant at index 290 in batch 1 2025-08-01 01:31:12,001 | WARNING | pyMut.annotate.actionable_mutation | Gene does not exist for variant at index 291 in batch 1 2025-08-01 01:31:12,001 | WARNING | pyMut.annotate.actionable_mutation | Unknown oncogenicity for variant at index 291 in batch 1 2025-08-01 01:31:12,001 | WARNING | pyMut.annotate.actionable_mutation | Gene does not exist for variant at index 292 in batch 1 2025-08-01 01:31:12,002 | WARNING | pyMut.annotate.actionable_mutation | Unknown oncogenicity for variant at index 292 in batch 1 2025-08-01 01:31:12,002 | WARNING | pyMut.annotate.actionable_mutation | Gene does not exist for variant at index 293 in batch 1 2025-08-01 01:31:12,002 | WARNING | pyMut.annotate.actionable_mutation | Unknown oncogenicity for variant at index 293 in batch 1 2025-08-01 01:31:12,003 | WARNING | pyMut.annotate.actionable_mutation | Gene does not exist for variant at index 294 in batch 1 2025-08-01 01:31:12,003 | WARNING | pyMut.annotate.actionable_mutation | Unknown oncogenicity for variant at index 294 in batch 1 2025-08-01 01:31:12,003 | WARNING | pyMut.annotate.actionable_mutation | Unknown oncogenicity for variant at index 295 in batch 1 2025-08-01 01:31:12,003 | WARNING | pyMut.annotate.actionable_mutation | Gene does not exist for variant at index 296 in batch 1 2025-08-01 01:31:12,004 | WARNING | pyMut.annotate.actionable_mutation | Unknown oncogenicity for variant at index 296 in batch 1 2025-08-01 01:31:12,004 | WARNING | pyMut.annotate.actionable_mutation | Unknown oncogenicity for variant at index 297 in batch 1 2025-08-01 01:31:12,004 | WARNING | pyMut.annotate.actionable_mutation | Gene does not exist for variant at index 298 in batch 1 2025-08-01 01:31:12,004 | WARNING | pyMut.annotate.actionable_mutation | Unknown oncogenicity for variant at index 298 in batch 1 2025-08-01 01:31:12,005 | WARNING | pyMut.annotate.actionable_mutation | Gene does not exist for variant at index 299 in batch 1 2025-08-01 01:31:12,005 | WARNING | pyMut.annotate.actionable_mutation | Unknown oncogenicity for variant at index 299 in batch 1 2025-08-01 01:31:12,005 | WARNING | pyMut.annotate.actionable_mutation | Gene does not exist for variant at index 300 in batch 1 2025-08-01 01:31:12,005 | WARNING | pyMut.annotate.actionable_mutation | Unknown oncogenicity for variant at index 300 in batch 1 2025-08-01 01:31:12,005 | WARNING | pyMut.annotate.actionable_mutation | Gene does not exist for variant at index 301 in batch 1 2025-08-01 01:31:12,006 | WARNING | pyMut.annotate.actionable_mutation | Unknown oncogenicity for variant at index 301 in batch 1 2025-08-01 01:31:12,006 | WARNING | pyMut.annotate.actionable_mutation | Gene does not exist for variant at index 302 in batch 1 2025-08-01 01:31:12,007 | WARNING | pyMut.annotate.actionable_mutation | Unknown oncogenicity for variant at index 302 in batch 1 2025-08-01 01:31:12,007 | WARNING | pyMut.annotate.actionable_mutation | Gene does not exist for variant at index 303 in batch 1 2025-08-01 01:31:12,007 | WARNING | pyMut.annotate.actionable_mutation | Unknown oncogenicity for variant at index 303 in batch 1 2025-08-01 01:31:12,007 | WARNING | pyMut.annotate.actionable_mutation | Gene does not exist for variant at index 304 in batch 1 2025-08-01 01:31:12,008 | WARNING | pyMut.annotate.actionable_mutation | Unknown oncogenicity for variant at index 304 in batch 1 2025-08-01 01:31:12,008 | WARNING | pyMut.annotate.actionable_mutation | Gene does not exist for variant at index 305 in batch 1 2025-08-01 01:31:12,008 | WARNING | pyMut.annotate.actionable_mutation | Unknown oncogenicity for variant at index 305 in batch 1 2025-08-01 01:31:12,008 | WARNING | pyMut.annotate.actionable_mutation | Gene does not exist for variant at index 306 in batch 1 2025-08-01 01:31:12,009 | WARNING | pyMut.annotate.actionable_mutation | Unknown oncogenicity for variant at index 306 in batch 1 2025-08-01 01:31:12,009 | WARNING | pyMut.annotate.actionable_mutation | Gene does not exist for variant at index 307 in batch 1 2025-08-01 01:31:12,009 | WARNING | pyMut.annotate.actionable_mutation | Unknown oncogenicity for variant at index 307 in batch 1 2025-08-01 01:31:12,009 | WARNING | pyMut.annotate.actionable_mutation | Gene does not exist for variant at index 308 in batch 1 2025-08-01 01:31:12,009 | WARNING | pyMut.annotate.actionable_mutation | Unknown oncogenicity for variant at index 308 in batch 1 2025-08-01 01:31:12,010 | WARNING | pyMut.annotate.actionable_mutation | Gene does not exist for variant at index 309 in batch 1 2025-08-01 01:31:12,011 | WARNING | pyMut.annotate.actionable_mutation | Unknown oncogenicity for variant at index 309 in batch 1 2025-08-01 01:31:12,011 | WARNING | pyMut.annotate.actionable_mutation | Gene does not exist for variant at index 310 in batch 1 2025-08-01 01:31:12,012 | WARNING | pyMut.annotate.actionable_mutation | Unknown oncogenicity for variant at index 310 in batch 1 2025-08-01 01:31:12,012 | WARNING | pyMut.annotate.actionable_mutation | Gene does not exist for variant at index 311 in batch 1 2025-08-01 01:31:12,012 | WARNING | pyMut.annotate.actionable_mutation | Unknown oncogenicity for variant at index 311 in batch 1 2025-08-01 01:31:12,012 | WARNING | pyMut.annotate.actionable_mutation | Gene does not exist for variant at index 312 in batch 1 2025-08-01 01:31:12,013 | WARNING | pyMut.annotate.actionable_mutation | Unknown oncogenicity for variant at index 312 in batch 1 2025-08-01 01:31:12,013 | WARNING | pyMut.annotate.actionable_mutation | Gene does not exist for variant at index 313 in batch 1 2025-08-01 01:31:12,013 | WARNING | pyMut.annotate.actionable_mutation | Unknown oncogenicity for variant at index 313 in batch 1 2025-08-01 01:31:12,013 | WARNING | pyMut.annotate.actionable_mutation | Gene does not exist for variant at index 314 in batch 1 2025-08-01 01:31:12,014 | WARNING | pyMut.annotate.actionable_mutation | Unknown oncogenicity for variant at index 314 in batch 1 2025-08-01 01:31:12,014 | WARNING | pyMut.annotate.actionable_mutation | Gene does not exist for variant at index 315 in batch 1 2025-08-01 01:31:12,014 | WARNING | pyMut.annotate.actionable_mutation | Unknown oncogenicity for variant at index 315 in batch 1 2025-08-01 01:31:12,015 | WARNING | pyMut.annotate.actionable_mutation | Gene does not exist for variant at index 316 in batch 1 2025-08-01 01:31:12,015 | WARNING | pyMut.annotate.actionable_mutation | Unknown oncogenicity for variant at index 316 in batch 1 2025-08-01 01:31:12,015 | WARNING | pyMut.annotate.actionable_mutation | Unknown oncogenicity for variant at index 328 in batch 1 2025-08-01 01:31:12,015 | WARNING | pyMut.annotate.actionable_mutation | Unknown oncogenicity for variant at index 331 in batch 1 2025-08-01 01:31:12,016 | WARNING | pyMut.annotate.actionable_mutation | Unknown oncogenicity for variant at index 343 in batch 1 2025-08-01 01:31:12,017 | WARNING | pyMut.annotate.actionable_mutation | Unknown oncogenicity for variant at index 347 in batch 1 2025-08-01 01:31:12,017 | WARNING | pyMut.annotate.actionable_mutation | Gene does not exist for variant at index 348 in batch 1 2025-08-01 01:31:12,017 | WARNING | pyMut.annotate.actionable_mutation | Unknown oncogenicity for variant at index 348 in batch 1 2025-08-01 01:31:12,018 | WARNING | pyMut.annotate.actionable_mutation | Gene does not exist for variant at index 349 in batch 1 2025-08-01 01:31:12,018 | WARNING | pyMut.annotate.actionable_mutation | Unknown oncogenicity for variant at index 349 in batch 1 2025-08-01 01:31:12,018 | WARNING | pyMut.annotate.actionable_mutation | Gene does not exist for variant at index 350 in batch 1 2025-08-01 01:31:12,019 | WARNING | pyMut.annotate.actionable_mutation | Unknown oncogenicity for variant at index 350 in batch 1 2025-08-01 01:31:12,019 | WARNING | pyMut.annotate.actionable_mutation | Gene does not exist for variant at index 351 in batch 1 2025-08-01 01:31:12,019 | WARNING | pyMut.annotate.actionable_mutation | Unknown oncogenicity for variant at index 351 in batch 1 2025-08-01 01:31:12,019 | WARNING | pyMut.annotate.actionable_mutation | Gene does not exist for variant at index 352 in batch 1 2025-08-01 01:31:12,020 | WARNING | pyMut.annotate.actionable_mutation | Unknown oncogenicity for variant at index 352 in batch 1 2025-08-01 01:31:12,020 | WARNING | pyMut.annotate.actionable_mutation | Gene does not exist for variant at index 353 in batch 1 2025-08-01 01:31:12,020 | WARNING | pyMut.annotate.actionable_mutation | Unknown oncogenicity for variant at index 353 in batch 1 2025-08-01 01:31:12,020 | WARNING | pyMut.annotate.actionable_mutation | Gene does not exist for variant at index 354 in batch 1 2025-08-01 01:31:12,021 | WARNING | pyMut.annotate.actionable_mutation | Unknown oncogenicity for variant at index 354 in batch 1 2025-08-01 01:31:12,021 | WARNING | pyMut.annotate.actionable_mutation | Gene does not exist for variant at index 356 in batch 1 2025-08-01 01:31:12,021 | WARNING | pyMut.annotate.actionable_mutation | Unknown oncogenicity for variant at index 356 in batch 1 2025-08-01 01:31:12,021 | WARNING | pyMut.annotate.actionable_mutation | Gene does not exist for variant at index 357 in batch 1 2025-08-01 01:31:12,022 | WARNING | pyMut.annotate.actionable_mutation | Unknown oncogenicity for variant at index 357 in batch 1 2025-08-01 01:31:12,022 | WARNING | pyMut.annotate.actionable_mutation | Unknown oncogenicity for variant at index 358 in batch 1 2025-08-01 01:31:12,022 | WARNING | pyMut.annotate.actionable_mutation | Unknown oncogenicity for variant at index 359 in batch 1 2025-08-01 01:31:12,024 | WARNING | pyMut.annotate.actionable_mutation | Gene does not exist for variant at index 361 in batch 1 2025-08-01 01:31:12,025 | WARNING | pyMut.annotate.actionable_mutation | Unknown oncogenicity for variant at index 361 in batch 1 2025-08-01 01:31:12,025 | WARNING | pyMut.annotate.actionable_mutation | Gene does not exist for variant at index 362 in batch 1 2025-08-01 01:31:12,025 | WARNING | pyMut.annotate.actionable_mutation | Unknown oncogenicity for variant at index 362 in batch 1 2025-08-01 01:31:12,026 | WARNING | pyMut.annotate.actionable_mutation | Gene does not exist for variant at index 363 in batch 1 2025-08-01 01:31:12,026 | WARNING | pyMut.annotate.actionable_mutation | Unknown oncogenicity for variant at index 363 in batch 1 2025-08-01 01:31:12,026 | WARNING | pyMut.annotate.actionable_mutation | Gene does not exist for variant at index 364 in batch 1 2025-08-01 01:31:12,026 | WARNING | pyMut.annotate.actionable_mutation | Unknown oncogenicity for variant at index 364 in batch 1 2025-08-01 01:31:12,026 | WARNING | pyMut.annotate.actionable_mutation | Gene does not exist for variant at index 365 in batch 1 2025-08-01 01:31:12,027 | WARNING | pyMut.annotate.actionable_mutation | Unknown oncogenicity for variant at index 365 in batch 1 2025-08-01 01:31:12,027 | WARNING | pyMut.annotate.actionable_mutation | Gene does not exist for variant at index 366 in batch 1 2025-08-01 01:31:12,027 | WARNING | pyMut.annotate.actionable_mutation | Unknown oncogenicity for variant at index 366 in batch 1 2025-08-01 01:31:12,027 | WARNING | pyMut.annotate.actionable_mutation | Gene does not exist for variant at index 367 in batch 1 2025-08-01 01:31:12,028 | WARNING | pyMut.annotate.actionable_mutation | Unknown oncogenicity for variant at index 367 in batch 1 2025-08-01 01:31:12,029 | WARNING | pyMut.annotate.actionable_mutation | Gene does not exist for variant at index 368 in batch 1 2025-08-01 01:31:12,029 | WARNING | pyMut.annotate.actionable_mutation | Unknown oncogenicity for variant at index 368 in batch 1 2025-08-01 01:31:12,029 | WARNING | pyMut.annotate.actionable_mutation | Gene does not exist for variant at index 369 in batch 1 2025-08-01 01:31:12,030 | WARNING | pyMut.annotate.actionable_mutation | Unknown oncogenicity for variant at index 369 in batch 1 2025-08-01 01:31:12,030 | WARNING | pyMut.annotate.actionable_mutation | Gene does not exist for variant at index 370 in batch 1 2025-08-01 01:31:12,030 | WARNING | pyMut.annotate.actionable_mutation | Unknown oncogenicity for variant at index 370 in batch 1 2025-08-01 01:31:12,030 | WARNING | pyMut.annotate.actionable_mutation | Gene does not exist for variant at index 371 in batch 1 2025-08-01 01:31:12,030 | WARNING | pyMut.annotate.actionable_mutation | Unknown oncogenicity for variant at index 371 in batch 1 2025-08-01 01:31:12,031 | WARNING | pyMut.annotate.actionable_mutation | Gene does not exist for variant at index 372 in batch 1 2025-08-01 01:31:12,031 | WARNING | pyMut.annotate.actionable_mutation | Unknown oncogenicity for variant at index 372 in batch 1 2025-08-01 01:31:12,031 | WARNING | pyMut.annotate.actionable_mutation | Gene does not exist for variant at index 373 in batch 1 2025-08-01 01:31:12,032 | WARNING | pyMut.annotate.actionable_mutation | Unknown oncogenicity for variant at index 373 in batch 1 2025-08-01 01:31:12,032 | WARNING | pyMut.annotate.actionable_mutation | Gene does not exist for variant at index 374 in batch 1 2025-08-01 01:31:12,032 | WARNING | pyMut.annotate.actionable_mutation | Unknown oncogenicity for variant at index 374 in batch 1 2025-08-01 01:31:12,032 | WARNING | pyMut.annotate.actionable_mutation | Gene does not exist for variant at index 375 in batch 1 2025-08-01 01:31:12,033 | WARNING | pyMut.annotate.actionable_mutation | Unknown oncogenicity for variant at index 375 in batch 1 2025-08-01 01:31:12,033 | WARNING | pyMut.annotate.actionable_mutation | Gene does not exist for variant at index 376 in batch 1 2025-08-01 01:31:12,033 | WARNING | pyMut.annotate.actionable_mutation | Unknown oncogenicity for variant at index 376 in batch 1 2025-08-01 01:31:12,033 | WARNING | pyMut.annotate.actionable_mutation | Gene does not exist for variant at index 377 in batch 1 2025-08-01 01:31:12,033 | WARNING | pyMut.annotate.actionable_mutation | Unknown oncogenicity for variant at index 377 in batch 1 2025-08-01 01:31:12,033 | WARNING | pyMut.annotate.actionable_mutation | Gene does not exist for variant at index 378 in batch 1 2025-08-01 01:31:12,034 | WARNING | pyMut.annotate.actionable_mutation | Unknown oncogenicity for variant at index 378 in batch 1 2025-08-01 01:31:12,034 | WARNING | pyMut.annotate.actionable_mutation | Gene does not exist for variant at index 379 in batch 1 2025-08-01 01:31:12,034 | WARNING | pyMut.annotate.actionable_mutation | Unknown oncogenicity for variant at index 379 in batch 1 2025-08-01 01:31:12,034 | WARNING | pyMut.annotate.actionable_mutation | Gene does not exist for variant at index 380 in batch 1 2025-08-01 01:31:12,035 | WARNING | pyMut.annotate.actionable_mutation | Unknown oncogenicity for variant at index 380 in batch 1 2025-08-01 01:31:12,035 | WARNING | pyMut.annotate.actionable_mutation | Gene does not exist for variant at index 381 in batch 1 2025-08-01 01:31:12,036 | WARNING | pyMut.annotate.actionable_mutation | Unknown oncogenicity for variant at index 381 in batch 1 2025-08-01 01:31:12,037 | WARNING | pyMut.annotate.actionable_mutation | Gene does not exist for variant at index 382 in batch 1 2025-08-01 01:31:12,037 | WARNING | pyMut.annotate.actionable_mutation | Unknown oncogenicity for variant at index 382 in batch 1 2025-08-01 01:31:12,038 | WARNING | pyMut.annotate.actionable_mutation | Gene does not exist for variant at index 383 in batch 1 2025-08-01 01:31:12,038 | WARNING | pyMut.annotate.actionable_mutation | Unknown oncogenicity for variant at index 383 in batch 1 2025-08-01 01:31:12,038 | WARNING | pyMut.annotate.actionable_mutation | Gene does not exist for variant at index 384 in batch 1 2025-08-01 01:31:12,038 | WARNING | pyMut.annotate.actionable_mutation | Unknown oncogenicity for variant at index 384 in batch 1 2025-08-01 01:31:12,038 | WARNING | pyMut.annotate.actionable_mutation | Gene does not exist for variant at index 385 in batch 1 2025-08-01 01:31:12,039 | WARNING | pyMut.annotate.actionable_mutation | Unknown oncogenicity for variant at index 385 in batch 1 2025-08-01 01:31:12,039 | WARNING | pyMut.annotate.actionable_mutation | Gene does not exist for variant at index 386 in batch 1 2025-08-01 01:31:12,039 | WARNING | pyMut.annotate.actionable_mutation | Unknown oncogenicity for variant at index 386 in batch 1 2025-08-01 01:31:12,039 | WARNING | pyMut.annotate.actionable_mutation | Gene does not exist for variant at index 387 in batch 1 2025-08-01 01:31:12,040 | WARNING | pyMut.annotate.actionable_mutation | Unknown oncogenicity for variant at index 387 in batch 1 2025-08-01 01:31:12,041 | WARNING | pyMut.annotate.actionable_mutation | Gene does not exist for variant at index 388 in batch 1 2025-08-01 01:31:12,041 | WARNING | pyMut.annotate.actionable_mutation | Unknown oncogenicity for variant at index 388 in batch 1 2025-08-01 01:31:12,041 | WARNING | pyMut.annotate.actionable_mutation | Gene does not exist for variant at index 389 in batch 1 2025-08-01 01:31:12,042 | WARNING | pyMut.annotate.actionable_mutation | Unknown oncogenicity for variant at index 389 in batch 1 2025-08-01 01:31:12,042 | WARNING | pyMut.annotate.actionable_mutation | Gene does not exist for variant at index 390 in batch 1 2025-08-01 01:31:12,042 | WARNING | pyMut.annotate.actionable_mutation | Unknown oncogenicity for variant at index 390 in batch 1 2025-08-01 01:31:12,042 | WARNING | pyMut.annotate.actionable_mutation | Gene does not exist for variant at index 391 in batch 1 2025-08-01 01:31:12,043 | WARNING | pyMut.annotate.actionable_mutation | Unknown oncogenicity for variant at index 391 in batch 1 2025-08-01 01:31:12,043 | WARNING | pyMut.annotate.actionable_mutation | Gene does not exist for variant at index 392 in batch 1 2025-08-01 01:31:12,044 | WARNING | pyMut.annotate.actionable_mutation | Unknown oncogenicity for variant at index 392 in batch 1 2025-08-01 01:31:12,044 | WARNING | pyMut.annotate.actionable_mutation | Unknown oncogenicity for variant at index 393 in batch 1 2025-08-01 01:31:12,044 | WARNING | pyMut.annotate.actionable_mutation | Gene does not exist for variant at index 394 in batch 1 2025-08-01 01:31:12,045 | WARNING | pyMut.annotate.actionable_mutation | Unknown oncogenicity for variant at index 394 in batch 1 2025-08-01 01:31:12,045 | WARNING | pyMut.annotate.actionable_mutation | Unknown oncogenicity for variant at index 395 in batch 1 2025-08-01 01:31:12,045 | WARNING | pyMut.annotate.actionable_mutation | Unknown oncogenicity for variant at index 403 in batch 1 2025-08-01 01:31:12,045 | WARNING | pyMut.annotate.actionable_mutation | Gene does not exist for variant at index 404 in batch 1 2025-08-01 01:31:12,046 | WARNING | pyMut.annotate.actionable_mutation | Unknown oncogenicity for variant at index 404 in batch 1 2025-08-01 01:31:12,046 | WARNING | pyMut.annotate.actionable_mutation | Unknown oncogenicity for variant at index 405 in batch 1 2025-08-01 01:31:12,046 | WARNING | pyMut.annotate.actionable_mutation | Gene does not exist for variant at index 406 in batch 1 2025-08-01 01:31:12,047 | WARNING | pyMut.annotate.actionable_mutation | Unknown oncogenicity for variant at index 406 in batch 1 2025-08-01 01:31:12,047 | WARNING | pyMut.annotate.actionable_mutation | Gene does not exist for variant at index 408 in batch 1 2025-08-01 01:31:12,047 | WARNING | pyMut.annotate.actionable_mutation | Unknown oncogenicity for variant at index 408 in batch 1 2025-08-01 01:31:12,047 | WARNING | pyMut.annotate.actionable_mutation | Gene does not exist for variant at index 410 in batch 1 2025-08-01 01:31:12,048 | WARNING | pyMut.annotate.actionable_mutation | Unknown oncogenicity for variant at index 410 in batch 1 2025-08-01 01:31:12,048 | WARNING | pyMut.annotate.actionable_mutation | Gene does not exist for variant at index 411 in batch 1 2025-08-01 01:31:12,049 | WARNING | pyMut.annotate.actionable_mutation | Unknown oncogenicity for variant at index 411 in batch 1 2025-08-01 01:31:12,049 | WARNING | pyMut.annotate.actionable_mutation | Gene does not exist for variant at index 412 in batch 1 2025-08-01 01:31:12,049 | WARNING | pyMut.annotate.actionable_mutation | Unknown oncogenicity for variant at index 412 in batch 1 2025-08-01 01:31:12,050 | WARNING | pyMut.annotate.actionable_mutation | Gene does not exist for variant at index 413 in batch 1 2025-08-01 01:31:12,050 | WARNING | pyMut.annotate.actionable_mutation | Unknown oncogenicity for variant at index 413 in batch 1 2025-08-01 01:31:12,050 | WARNING | pyMut.annotate.actionable_mutation | Gene does not exist for variant at index 414 in batch 1 2025-08-01 01:31:12,051 | WARNING | pyMut.annotate.actionable_mutation | Unknown oncogenicity for variant at index 414 in batch 1 2025-08-01 01:31:12,051 | WARNING | pyMut.annotate.actionable_mutation | Gene does not exist for variant at index 415 in batch 1 2025-08-01 01:31:12,052 | WARNING | pyMut.annotate.actionable_mutation | Unknown oncogenicity for variant at index 415 in batch 1 2025-08-01 01:31:12,052 | WARNING | pyMut.annotate.actionable_mutation | Gene does not exist for variant at index 416 in batch 1 2025-08-01 01:31:12,052 | WARNING | pyMut.annotate.actionable_mutation | Unknown oncogenicity for variant at index 416 in batch 1 2025-08-01 01:31:12,053 | WARNING | pyMut.annotate.actionable_mutation | Unknown oncogenicity for variant at index 417 in batch 1 2025-08-01 01:31:12,053 | WARNING | pyMut.annotate.actionable_mutation | Gene does not exist for variant at index 418 in batch 1 2025-08-01 01:31:12,054 | WARNING | pyMut.annotate.actionable_mutation | Unknown oncogenicity for variant at index 418 in batch 1 2025-08-01 01:31:12,054 | WARNING | pyMut.annotate.actionable_mutation | Gene does not exist for variant at index 419 in batch 1 2025-08-01 01:31:12,054 | WARNING | pyMut.annotate.actionable_mutation | Unknown oncogenicity for variant at index 419 in batch 1 2025-08-01 01:31:12,054 | WARNING | pyMut.annotate.actionable_mutation | Gene does not exist for variant at index 420 in batch 1 2025-08-01 01:31:12,054 | WARNING | pyMut.annotate.actionable_mutation | Unknown oncogenicity for variant at index 420 in batch 1 2025-08-01 01:31:12,055 | WARNING | pyMut.annotate.actionable_mutation | Gene does not exist for variant at index 421 in batch 1 2025-08-01 01:31:12,055 | WARNING | pyMut.annotate.actionable_mutation | Unknown oncogenicity for variant at index 421 in batch 1 2025-08-01 01:31:12,055 | WARNING | pyMut.annotate.actionable_mutation | Gene does not exist for variant at index 422 in batch 1 2025-08-01 01:31:12,055 | WARNING | pyMut.annotate.actionable_mutation | Unknown oncogenicity for variant at index 422 in batch 1 2025-08-01 01:31:12,055 | WARNING | pyMut.annotate.actionable_mutation | Unknown oncogenicity for variant at index 423 in batch 1 2025-08-01 01:31:12,056 | WARNING | pyMut.annotate.actionable_mutation | Unknown oncogenicity for variant at index 427 in batch 1 2025-08-01 01:31:12,056 | WARNING | pyMut.annotate.actionable_mutation | Gene does not exist for variant at index 431 in batch 1 2025-08-01 01:31:12,056 | WARNING | pyMut.annotate.actionable_mutation | Unknown oncogenicity for variant at index 431 in batch 1 2025-08-01 01:31:12,057 | WARNING | pyMut.annotate.actionable_mutation | Gene does not exist for variant at index 432 in batch 1 2025-08-01 01:31:12,058 | WARNING | pyMut.annotate.actionable_mutation | Unknown oncogenicity for variant at index 432 in batch 1 2025-08-01 01:31:12,058 | WARNING | pyMut.annotate.actionable_mutation | Gene does not exist for variant at index 433 in batch 1 2025-08-01 01:31:12,058 | WARNING | pyMut.annotate.actionable_mutation | Unknown oncogenicity for variant at index 433 in batch 1 2025-08-01 01:31:12,058 | WARNING | pyMut.annotate.actionable_mutation | Gene does not exist for variant at index 434 in batch 1 2025-08-01 01:31:12,059 | WARNING | pyMut.annotate.actionable_mutation | Unknown oncogenicity for variant at index 434 in batch 1 2025-08-01 01:31:12,059 | WARNING | pyMut.annotate.actionable_mutation | Gene does not exist for variant at index 435 in batch 1 2025-08-01 01:31:12,059 | WARNING | pyMut.annotate.actionable_mutation | Unknown oncogenicity for variant at index 435 in batch 1 2025-08-01 01:31:12,059 | WARNING | pyMut.annotate.actionable_mutation | Gene does not exist for variant at index 436 in batch 1 2025-08-01 01:31:12,059 | WARNING | pyMut.annotate.actionable_mutation | Unknown oncogenicity for variant at index 436 in batch 1 2025-08-01 01:31:12,060 | WARNING | pyMut.annotate.actionable_mutation | Gene does not exist for variant at index 437 in batch 1 2025-08-01 01:31:12,060 | WARNING | pyMut.annotate.actionable_mutation | Unknown oncogenicity for variant at index 437 in batch 1 2025-08-01 01:31:12,061 | WARNING | pyMut.annotate.actionable_mutation | Gene does not exist for variant at index 439 in batch 1 2025-08-01 01:31:12,061 | WARNING | pyMut.annotate.actionable_mutation | Unknown oncogenicity for variant at index 439 in batch 1 2025-08-01 01:31:12,061 | WARNING | pyMut.annotate.actionable_mutation | Unknown oncogenicity for variant at index 440 in batch 1 2025-08-01 01:31:12,061 | WARNING | pyMut.annotate.actionable_mutation | Gene does not exist for variant at index 441 in batch 1 2025-08-01 01:31:12,062 | WARNING | pyMut.annotate.actionable_mutation | Unknown oncogenicity for variant at index 441 in batch 1 2025-08-01 01:31:12,062 | WARNING | pyMut.annotate.actionable_mutation | Gene does not exist for variant at index 442 in batch 1 2025-08-01 01:31:12,062 | WARNING | pyMut.annotate.actionable_mutation | Unknown oncogenicity for variant at index 442 in batch 1 2025-08-01 01:31:12,062 | WARNING | pyMut.annotate.actionable_mutation | Unknown oncogenicity for variant at index 443 in batch 1 2025-08-01 01:31:12,063 | WARNING | pyMut.annotate.actionable_mutation | Gene does not exist for variant at index 444 in batch 1 2025-08-01 01:31:12,063 | WARNING | pyMut.annotate.actionable_mutation | Unknown oncogenicity for variant at index 444 in batch 1 2025-08-01 01:31:12,063 | WARNING | pyMut.annotate.actionable_mutation | Gene does not exist for variant at index 445 in batch 1 2025-08-01 01:31:12,063 | WARNING | pyMut.annotate.actionable_mutation | Unknown oncogenicity for variant at index 445 in batch 1 2025-08-01 01:31:12,063 | WARNING | pyMut.annotate.actionable_mutation | Gene does not exist for variant at index 446 in batch 1 2025-08-01 01:31:12,064 | WARNING | pyMut.annotate.actionable_mutation | Unknown oncogenicity for variant at index 446 in batch 1 2025-08-01 01:31:12,064 | WARNING | pyMut.annotate.actionable_mutation | Gene does not exist for variant at index 447 in batch 1 2025-08-01 01:31:12,065 | WARNING | pyMut.annotate.actionable_mutation | Unknown oncogenicity for variant at index 447 in batch 1 2025-08-01 01:31:12,065 | WARNING | pyMut.annotate.actionable_mutation | Gene does not exist for variant at index 448 in batch 1 2025-08-01 01:31:12,066 | WARNING | pyMut.annotate.actionable_mutation | Unknown oncogenicity for variant at index 448 in batch 1 2025-08-01 01:31:12,067 | WARNING | pyMut.annotate.actionable_mutation | Gene does not exist for variant at index 449 in batch 1 2025-08-01 01:31:12,067 | WARNING | pyMut.annotate.actionable_mutation | Unknown oncogenicity for variant at index 449 in batch 1 2025-08-01 01:31:12,067 | WARNING | pyMut.annotate.actionable_mutation | Gene does not exist for variant at index 450 in batch 1 2025-08-01 01:31:12,067 | WARNING | pyMut.annotate.actionable_mutation | Unknown oncogenicity for variant at index 450 in batch 1 2025-08-01 01:31:12,068 | WARNING | pyMut.annotate.actionable_mutation | Gene does not exist for variant at index 451 in batch 1 2025-08-01 01:31:12,068 | WARNING | pyMut.annotate.actionable_mutation | Unknown oncogenicity for variant at index 451 in batch 1 2025-08-01 01:31:12,068 | WARNING | pyMut.annotate.actionable_mutation | Gene does not exist for variant at index 452 in batch 1 2025-08-01 01:31:12,069 | WARNING | pyMut.annotate.actionable_mutation | Unknown oncogenicity for variant at index 452 in batch 1 2025-08-01 01:31:12,069 | WARNING | pyMut.annotate.actionable_mutation | Gene does not exist for variant at index 453 in batch 1 2025-08-01 01:31:12,070 | WARNING | pyMut.annotate.actionable_mutation | Unknown oncogenicity for variant at index 453 in batch 1 2025-08-01 01:31:12,070 | WARNING | pyMut.annotate.actionable_mutation | Gene does not exist for variant at index 454 in batch 1 2025-08-01 01:31:12,070 | WARNING | pyMut.annotate.actionable_mutation | Unknown oncogenicity for variant at index 454 in batch 1 2025-08-01 01:31:12,071 | WARNING | pyMut.annotate.actionable_mutation | Gene does not exist for variant at index 455 in batch 1 2025-08-01 01:31:12,071 | WARNING | pyMut.annotate.actionable_mutation | Unknown oncogenicity for variant at index 455 in batch 1 2025-08-01 01:31:12,071 | WARNING | pyMut.annotate.actionable_mutation | Gene does not exist for variant at index 456 in batch 1 2025-08-01 01:31:12,071 | WARNING | pyMut.annotate.actionable_mutation | Unknown oncogenicity for variant at index 456 in batch 1 2025-08-01 01:31:12,072 | WARNING | pyMut.annotate.actionable_mutation | Gene does not exist for variant at index 457 in batch 1 2025-08-01 01:31:12,072 | WARNING | pyMut.annotate.actionable_mutation | Unknown oncogenicity for variant at index 457 in batch 1 2025-08-01 01:31:12,073 | WARNING | pyMut.annotate.actionable_mutation | Gene does not exist for variant at index 458 in batch 1 2025-08-01 01:31:12,073 | WARNING | pyMut.annotate.actionable_mutation | Unknown oncogenicity for variant at index 458 in batch 1 2025-08-01 01:31:12,073 | WARNING | pyMut.annotate.actionable_mutation | Gene does not exist for variant at index 459 in batch 1 2025-08-01 01:31:12,073 | WARNING | pyMut.annotate.actionable_mutation | Unknown oncogenicity for variant at index 459 in batch 1 2025-08-01 01:31:12,073 | WARNING | pyMut.annotate.actionable_mutation | Gene does not exist for variant at index 460 in batch 1 2025-08-01 01:31:12,074 | WARNING | pyMut.annotate.actionable_mutation | Unknown oncogenicity for variant at index 460 in batch 1 2025-08-01 01:31:12,074 | WARNING | pyMut.annotate.actionable_mutation | Gene does not exist for variant at index 461 in batch 1 2025-08-01 01:31:12,074 | WARNING | pyMut.annotate.actionable_mutation | Unknown oncogenicity for variant at index 461 in batch 1 2025-08-01 01:31:12,075 | WARNING | pyMut.annotate.actionable_mutation | Gene does not exist for variant at index 462 in batch 1 2025-08-01 01:31:12,075 | WARNING | pyMut.annotate.actionable_mutation | Unknown oncogenicity for variant at index 462 in batch 1 2025-08-01 01:31:12,075 | WARNING | pyMut.annotate.actionable_mutation | Gene does not exist for variant at index 463 in batch 1 2025-08-01 01:31:12,075 | WARNING | pyMut.annotate.actionable_mutation | Unknown oncogenicity for variant at index 463 in batch 1 2025-08-01 01:31:12,076 | WARNING | pyMut.annotate.actionable_mutation | Gene does not exist for variant at index 464 in batch 1 2025-08-01 01:31:12,076 | WARNING | pyMut.annotate.actionable_mutation | Unknown oncogenicity for variant at index 464 in batch 1 2025-08-01 01:31:12,076 | WARNING | pyMut.annotate.actionable_mutation | Gene does not exist for variant at index 465 in batch 1 2025-08-01 01:31:12,077 | WARNING | pyMut.annotate.actionable_mutation | Unknown oncogenicity for variant at index 465 in batch 1 2025-08-01 01:31:12,078 | WARNING | pyMut.annotate.actionable_mutation | Gene does not exist for variant at index 466 in batch 1 2025-08-01 01:31:12,078 | WARNING | pyMut.annotate.actionable_mutation | Unknown oncogenicity for variant at index 466 in batch 1 2025-08-01 01:31:12,078 | WARNING | pyMut.annotate.actionable_mutation | Unknown oncogenicity for variant at index 467 in batch 1 2025-08-01 01:31:12,078 | WARNING | pyMut.annotate.actionable_mutation | Gene does not exist for variant at index 468 in batch 1 2025-08-01 01:31:12,079 | WARNING | pyMut.annotate.actionable_mutation | Unknown oncogenicity for variant at index 468 in batch 1 2025-08-01 01:31:12,079 | WARNING | pyMut.annotate.actionable_mutation | Gene does not exist for variant at index 469 in batch 1 2025-08-01 01:31:12,079 | WARNING | pyMut.annotate.actionable_mutation | Unknown oncogenicity for variant at index 469 in batch 1 2025-08-01 01:31:12,079 | WARNING | pyMut.annotate.actionable_mutation | Gene does not exist for variant at index 470 in batch 1 2025-08-01 01:31:12,080 | WARNING | pyMut.annotate.actionable_mutation | Unknown oncogenicity for variant at index 470 in batch 1 2025-08-01 01:31:12,080 | WARNING | pyMut.annotate.actionable_mutation | Gene does not exist for variant at index 471 in batch 1 2025-08-01 01:31:12,080 | WARNING | pyMut.annotate.actionable_mutation | Unknown oncogenicity for variant at index 471 in batch 1 2025-08-01 01:31:12,080 | WARNING | pyMut.annotate.actionable_mutation | Gene does not exist for variant at index 472 in batch 1 2025-08-01 01:31:12,080 | WARNING | pyMut.annotate.actionable_mutation | Unknown oncogenicity for variant at index 472 in batch 1 2025-08-01 01:31:12,081 | WARNING | pyMut.annotate.actionable_mutation | Gene does not exist for variant at index 473 in batch 1 2025-08-01 01:31:12,081 | WARNING | pyMut.annotate.actionable_mutation | Unknown oncogenicity for variant at index 473 in batch 1 2025-08-01 01:31:12,083 | WARNING | pyMut.annotate.actionable_mutation | Gene does not exist for variant at index 474 in batch 1 2025-08-01 01:31:12,083 | WARNING | pyMut.annotate.actionable_mutation | Unknown oncogenicity for variant at index 474 in batch 1 2025-08-01 01:31:12,083 | WARNING | pyMut.annotate.actionable_mutation | Gene does not exist for variant at index 475 in batch 1 2025-08-01 01:31:12,083 | WARNING | pyMut.annotate.actionable_mutation | Unknown oncogenicity for variant at index 475 in batch 1 2025-08-01 01:31:12,084 | WARNING | pyMut.annotate.actionable_mutation | Unknown oncogenicity for variant at index 476 in batch 1 2025-08-01 01:31:12,085 | WARNING | pyMut.annotate.actionable_mutation | Gene does not exist for variant at index 478 in batch 1 2025-08-01 01:31:12,085 | WARNING | pyMut.annotate.actionable_mutation | Unknown oncogenicity for variant at index 478 in batch 1 2025-08-01 01:31:12,085 | WARNING | pyMut.annotate.actionable_mutation | Gene does not exist for variant at index 479 in batch 1 2025-08-01 01:31:12,086 | WARNING | pyMut.annotate.actionable_mutation | Unknown oncogenicity for variant at index 479 in batch 1 2025-08-01 01:31:12,086 | WARNING | pyMut.annotate.actionable_mutation | Unknown oncogenicity for variant at index 480 in batch 1 2025-08-01 01:31:12,086 | WARNING | pyMut.annotate.actionable_mutation | Gene does not exist for variant at index 481 in batch 1 2025-08-01 01:31:12,086 | WARNING | pyMut.annotate.actionable_mutation | Unknown oncogenicity for variant at index 481 in batch 1 2025-08-01 01:31:12,087 | WARNING | pyMut.annotate.actionable_mutation | Gene does not exist for variant at index 482 in batch 1 2025-08-01 01:31:12,087 | WARNING | pyMut.annotate.actionable_mutation | Unknown oncogenicity for variant at index 482 in batch 1 2025-08-01 01:31:12,087 | WARNING | pyMut.annotate.actionable_mutation | Gene does not exist for variant at index 483 in batch 1 2025-08-01 01:31:12,087 | WARNING | pyMut.annotate.actionable_mutation | Unknown oncogenicity for variant at index 483 in batch 1 2025-08-01 01:31:12,088 | WARNING | pyMut.annotate.actionable_mutation | Gene does not exist for variant at index 484 in batch 1 2025-08-01 01:31:12,088 | WARNING | pyMut.annotate.actionable_mutation | Unknown oncogenicity for variant at index 484 in batch 1 2025-08-01 01:31:12,088 | WARNING | pyMut.annotate.actionable_mutation | Gene does not exist for variant at index 485 in batch 1 2025-08-01 01:31:12,089 | WARNING | pyMut.annotate.actionable_mutation | Unknown oncogenicity for variant at index 485 in batch 1 2025-08-01 01:31:12,089 | WARNING | pyMut.annotate.actionable_mutation | Gene does not exist for variant at index 486 in batch 1 2025-08-01 01:31:12,090 | WARNING | pyMut.annotate.actionable_mutation | Unknown oncogenicity for variant at index 486 in batch 1 2025-08-01 01:31:12,090 | WARNING | pyMut.annotate.actionable_mutation | Gene does not exist for variant at index 487 in batch 1 2025-08-01 01:31:12,090 | WARNING | pyMut.annotate.actionable_mutation | Unknown oncogenicity for variant at index 487 in batch 1 2025-08-01 01:31:12,090 | WARNING | pyMut.annotate.actionable_mutation | Gene does not exist for variant at index 488 in batch 1 2025-08-01 01:31:12,091 | WARNING | pyMut.annotate.actionable_mutation | Unknown oncogenicity for variant at index 488 in batch 1 2025-08-01 01:31:12,091 | WARNING | pyMut.annotate.actionable_mutation | Gene does not exist for variant at index 489 in batch 1 2025-08-01 01:31:12,091 | WARNING | pyMut.annotate.actionable_mutation | Unknown oncogenicity for variant at index 489 in batch 1 2025-08-01 01:31:12,091 | WARNING | pyMut.annotate.actionable_mutation | Gene does not exist for variant at index 490 in batch 1 2025-08-01 01:31:12,092 | WARNING | pyMut.annotate.actionable_mutation | Unknown oncogenicity for variant at index 490 in batch 1 2025-08-01 01:31:12,092 | WARNING | pyMut.annotate.actionable_mutation | Gene does not exist for variant at index 491 in batch 1 2025-08-01 01:31:12,092 | WARNING | pyMut.annotate.actionable_mutation | Unknown oncogenicity for variant at index 491 in batch 1 2025-08-01 01:31:12,093 | WARNING | pyMut.annotate.actionable_mutation | Gene does not exist for variant at index 492 in batch 1 2025-08-01 01:31:12,093 | WARNING | pyMut.annotate.actionable_mutation | Unknown oncogenicity for variant at index 492 in batch 1 2025-08-01 01:31:12,093 | WARNING | pyMut.annotate.actionable_mutation | Gene does not exist for variant at index 493 in batch 1 2025-08-01 01:31:12,094 | WARNING | pyMut.annotate.actionable_mutation | Unknown oncogenicity for variant at index 493 in batch 1 2025-08-01 01:31:12,094 | WARNING | pyMut.annotate.actionable_mutation | Gene does not exist for variant at index 494 in batch 1 2025-08-01 01:31:12,094 | WARNING | pyMut.annotate.actionable_mutation | Unknown oncogenicity for variant at index 494 in batch 1 2025-08-01 01:31:12,095 | WARNING | pyMut.annotate.actionable_mutation | Gene does not exist for variant at index 495 in batch 1 2025-08-01 01:31:12,096 | WARNING | pyMut.annotate.actionable_mutation | Unknown oncogenicity for variant at index 495 in batch 1 2025-08-01 01:31:12,096 | WARNING | pyMut.annotate.actionable_mutation | Gene does not exist for variant at index 496 in batch 1 2025-08-01 01:31:12,096 | WARNING | pyMut.annotate.actionable_mutation | Unknown oncogenicity for variant at index 496 in batch 1 2025-08-01 01:31:12,096 | WARNING | pyMut.annotate.actionable_mutation | Gene does not exist for variant at index 497 in batch 1 2025-08-01 01:31:12,096 | WARNING | pyMut.annotate.actionable_mutation | Unknown oncogenicity for variant at index 497 in batch 1 2025-08-01 01:31:12,097 | WARNING | pyMut.annotate.actionable_mutation | Gene does not exist for variant at index 498 in batch 1 2025-08-01 01:31:12,097 | WARNING | pyMut.annotate.actionable_mutation | Unknown oncogenicity for variant at index 498 in batch 1 2025-08-01 01:31:12,098 | WARNING | pyMut.annotate.actionable_mutation | Gene does not exist for variant at index 499 in batch 1 2025-08-01 01:31:12,098 | WARNING | pyMut.annotate.actionable_mutation | Unknown oncogenicity for variant at index 499 in batch 1 2025-08-01 01:31:12,098 | WARNING | pyMut.annotate.actionable_mutation | Gene does not exist for variant at index 500 in batch 1 2025-08-01 01:31:12,099 | WARNING | pyMut.annotate.actionable_mutation | Unknown oncogenicity for variant at index 500 in batch 1 2025-08-01 01:31:12,099 | WARNING | pyMut.annotate.actionable_mutation | Gene does not exist for variant at index 501 in batch 1 2025-08-01 01:31:12,099 | WARNING | pyMut.annotate.actionable_mutation | Unknown oncogenicity for variant at index 501 in batch 1 2025-08-01 01:31:12,099 | WARNING | pyMut.annotate.actionable_mutation | Gene does not exist for variant at index 502 in batch 1 2025-08-01 01:31:12,100 | WARNING | pyMut.annotate.actionable_mutation | Unknown oncogenicity for variant at index 502 in batch 1 2025-08-01 01:31:12,100 | WARNING | pyMut.annotate.actionable_mutation | Gene does not exist for variant at index 503 in batch 1 2025-08-01 01:31:12,101 | WARNING | pyMut.annotate.actionable_mutation | Unknown oncogenicity for variant at index 503 in batch 1 2025-08-01 01:31:12,101 | WARNING | pyMut.annotate.actionable_mutation | Unknown oncogenicity for variant at index 504 in batch 1 2025-08-01 01:31:12,101 | WARNING | pyMut.annotate.actionable_mutation | Unknown oncogenicity for variant at index 505 in batch 1 2025-08-01 01:31:12,101 | WARNING | pyMut.annotate.actionable_mutation | Unknown oncogenicity for variant at index 506 in batch 1 2025-08-01 01:31:12,102 | WARNING | pyMut.annotate.actionable_mutation | Unknown oncogenicity for variant at index 507 in batch 1 2025-08-01 01:31:12,102 | WARNING | pyMut.annotate.actionable_mutation | Unknown oncogenicity for variant at index 508 in batch 1 2025-08-01 01:31:12,102 | WARNING | pyMut.annotate.actionable_mutation | Unknown oncogenicity for variant at index 509 in batch 1 2025-08-01 01:31:12,103 | WARNING | pyMut.annotate.actionable_mutation | Unknown oncogenicity for variant at index 510 in batch 1 2025-08-01 01:31:12,104 | WARNING | pyMut.annotate.actionable_mutation | Gene does not exist for variant at index 511 in batch 1 2025-08-01 01:31:12,104 | WARNING | pyMut.annotate.actionable_mutation | Unknown oncogenicity for variant at index 511 in batch 1 2025-08-01 01:31:12,104 | WARNING | pyMut.annotate.actionable_mutation | Gene does not exist for variant at index 512 in batch 1 2025-08-01 01:31:12,104 | WARNING | pyMut.annotate.actionable_mutation | Unknown oncogenicity for variant at index 512 in batch 1 2025-08-01 01:31:12,104 | WARNING | pyMut.annotate.actionable_mutation | Gene does not exist for variant at index 513 in batch 1 2025-08-01 01:31:12,105 | WARNING | pyMut.annotate.actionable_mutation | Unknown oncogenicity for variant at index 513 in batch 1 2025-08-01 01:31:12,105 | WARNING | pyMut.annotate.actionable_mutation | Gene does not exist for variant at index 514 in batch 1 2025-08-01 01:31:12,105 | WARNING | pyMut.annotate.actionable_mutation | Unknown oncogenicity for variant at index 514 in batch 1 2025-08-01 01:31:12,105 | WARNING | pyMut.annotate.actionable_mutation | Gene does not exist for variant at index 515 in batch 1 2025-08-01 01:31:12,106 | WARNING | pyMut.annotate.actionable_mutation | Unknown oncogenicity for variant at index 515 in batch 1 2025-08-01 01:31:12,106 | WARNING | pyMut.annotate.actionable_mutation | Gene does not exist for variant at index 516 in batch 1 2025-08-01 01:31:12,107 | WARNING | pyMut.annotate.actionable_mutation | Unknown oncogenicity for variant at index 516 in batch 1 2025-08-01 01:31:12,107 | WARNING | pyMut.annotate.actionable_mutation | Gene does not exist for variant at index 517 in batch 1 2025-08-01 01:31:12,107 | WARNING | pyMut.annotate.actionable_mutation | Unknown oncogenicity for variant at index 517 in batch 1 2025-08-01 01:31:12,107 | WARNING | pyMut.annotate.actionable_mutation | Gene does not exist for variant at index 518 in batch 1 2025-08-01 01:31:12,108 | WARNING | pyMut.annotate.actionable_mutation | Unknown oncogenicity for variant at index 518 in batch 1 2025-08-01 01:31:12,108 | WARNING | pyMut.annotate.actionable_mutation | Gene does not exist for variant at index 519 in batch 1 2025-08-01 01:31:12,108 | WARNING | pyMut.annotate.actionable_mutation | Unknown oncogenicity for variant at index 519 in batch 1 2025-08-01 01:31:12,108 | WARNING | pyMut.annotate.actionable_mutation | Gene does not exist for variant at index 520 in batch 1 2025-08-01 01:31:12,108 | WARNING | pyMut.annotate.actionable_mutation | Unknown oncogenicity for variant at index 520 in batch 1 2025-08-01 01:31:12,109 | WARNING | pyMut.annotate.actionable_mutation | Gene does not exist for variant at index 521 in batch 1 2025-08-01 01:31:12,109 | WARNING | pyMut.annotate.actionable_mutation | Unknown oncogenicity for variant at index 521 in batch 1 2025-08-01 01:31:12,109 | WARNING | pyMut.annotate.actionable_mutation | Gene does not exist for variant at index 522 in batch 1 2025-08-01 01:31:12,109 | WARNING | pyMut.annotate.actionable_mutation | Unknown oncogenicity for variant at index 522 in batch 1 2025-08-01 01:31:12,110 | WARNING | pyMut.annotate.actionable_mutation | Gene does not exist for variant at index 523 in batch 1 2025-08-01 01:31:12,111 | WARNING | pyMut.annotate.actionable_mutation | Unknown oncogenicity for variant at index 523 in batch 1 2025-08-01 01:31:12,111 | WARNING | pyMut.annotate.actionable_mutation | Gene does not exist for variant at index 524 in batch 1 2025-08-01 01:31:12,111 | WARNING | pyMut.annotate.actionable_mutation | Unknown oncogenicity for variant at index 524 in batch 1 2025-08-01 01:31:12,112 | WARNING | pyMut.annotate.actionable_mutation | Gene does not exist for variant at index 525 in batch 1 2025-08-01 01:31:12,112 | WARNING | pyMut.annotate.actionable_mutation | Unknown oncogenicity for variant at index 525 in batch 1 2025-08-01 01:31:12,113 | WARNING | pyMut.annotate.actionable_mutation | Gene does not exist for variant at index 526 in batch 1 2025-08-01 01:31:12,113 | WARNING | pyMut.annotate.actionable_mutation | Unknown oncogenicity for variant at index 526 in batch 1 2025-08-01 01:31:12,113 | WARNING | pyMut.annotate.actionable_mutation | Gene does not exist for variant at index 527 in batch 1 2025-08-01 01:31:12,114 | WARNING | pyMut.annotate.actionable_mutation | Unknown oncogenicity for variant at index 527 in batch 1 2025-08-01 01:31:12,114 | WARNING | pyMut.annotate.actionable_mutation | Gene does not exist for variant at index 528 in batch 1 2025-08-01 01:31:12,114 | WARNING | pyMut.annotate.actionable_mutation | Unknown oncogenicity for variant at index 528 in batch 1 2025-08-01 01:31:12,114 | WARNING | pyMut.annotate.actionable_mutation | Gene does not exist for variant at index 529 in batch 1 2025-08-01 01:31:12,115 | WARNING | pyMut.annotate.actionable_mutation | Unknown oncogenicity for variant at index 529 in batch 1 2025-08-01 01:31:12,115 | WARNING | pyMut.annotate.actionable_mutation | Gene does not exist for variant at index 530 in batch 1 2025-08-01 01:31:12,115 | WARNING | pyMut.annotate.actionable_mutation | Unknown oncogenicity for variant at index 530 in batch 1 2025-08-01 01:31:12,116 | WARNING | pyMut.annotate.actionable_mutation | Gene does not exist for variant at index 531 in batch 1 2025-08-01 01:31:12,116 | WARNING | pyMut.annotate.actionable_mutation | Unknown oncogenicity for variant at index 531 in batch 1 2025-08-01 01:31:12,116 | WARNING | pyMut.annotate.actionable_mutation | Gene does not exist for variant at index 532 in batch 1 2025-08-01 01:31:12,117 | WARNING | pyMut.annotate.actionable_mutation | Unknown oncogenicity for variant at index 532 in batch 1 2025-08-01 01:31:12,117 | WARNING | pyMut.annotate.actionable_mutation | Gene does not exist for variant at index 534 in batch 1 2025-08-01 01:31:12,117 | WARNING | pyMut.annotate.actionable_mutation | Unknown oncogenicity for variant at index 534 in batch 1 2025-08-01 01:31:12,118 | WARNING | pyMut.annotate.actionable_mutation | Gene does not exist for variant at index 535 in batch 1 2025-08-01 01:31:12,118 | WARNING | pyMut.annotate.actionable_mutation | Unknown oncogenicity for variant at index 535 in batch 1 2025-08-01 01:31:12,118 | WARNING | pyMut.annotate.actionable_mutation | Gene does not exist for variant at index 536 in batch 1 2025-08-01 01:31:12,118 | WARNING | pyMut.annotate.actionable_mutation | Unknown oncogenicity for variant at index 536 in batch 1 2025-08-01 01:31:12,118 | WARNING | pyMut.annotate.actionable_mutation | Gene does not exist for variant at index 537 in batch 1 2025-08-01 01:31:12,119 | WARNING | pyMut.annotate.actionable_mutation | Unknown oncogenicity for variant at index 537 in batch 1 2025-08-01 01:31:12,119 | WARNING | pyMut.annotate.actionable_mutation | Gene does not exist for variant at index 538 in batch 1 2025-08-01 01:31:12,119 | WARNING | pyMut.annotate.actionable_mutation | Unknown oncogenicity for variant at index 538 in batch 1 2025-08-01 01:31:12,119 | WARNING | pyMut.annotate.actionable_mutation | Gene does not exist for variant at index 539 in batch 1 2025-08-01 01:31:12,119 | WARNING | pyMut.annotate.actionable_mutation | Unknown oncogenicity for variant at index 539 in batch 1 2025-08-01 01:31:12,120 | WARNING | pyMut.annotate.actionable_mutation | Gene does not exist for variant at index 540 in batch 1 2025-08-01 01:31:12,120 | WARNING | pyMut.annotate.actionable_mutation | Unknown oncogenicity for variant at index 540 in batch 1 2025-08-01 01:31:12,121 | WARNING | pyMut.annotate.actionable_mutation | Gene does not exist for variant at index 541 in batch 1 2025-08-01 01:31:12,121 | WARNING | pyMut.annotate.actionable_mutation | Unknown oncogenicity for variant at index 541 in batch 1 2025-08-01 01:31:12,121 | WARNING | pyMut.annotate.actionable_mutation | Unknown oncogenicity for variant at index 542 in batch 1 2025-08-01 01:31:12,122 | WARNING | pyMut.annotate.actionable_mutation | Gene does not exist for variant at index 543 in batch 1 2025-08-01 01:31:12,122 | WARNING | pyMut.annotate.actionable_mutation | Unknown oncogenicity for variant at index 543 in batch 1 2025-08-01 01:31:12,122 | WARNING | pyMut.annotate.actionable_mutation | Unknown oncogenicity for variant at index 544 in batch 1 2025-08-01 01:31:12,123 | WARNING | pyMut.annotate.actionable_mutation | Gene does not exist for variant at index 545 in batch 1 2025-08-01 01:31:12,123 | WARNING | pyMut.annotate.actionable_mutation | Unknown oncogenicity for variant at index 545 in batch 1 2025-08-01 01:31:12,123 | WARNING | pyMut.annotate.actionable_mutation | Gene does not exist for variant at index 546 in batch 1 2025-08-01 01:31:12,123 | WARNING | pyMut.annotate.actionable_mutation | Unknown oncogenicity for variant at index 546 in batch 1 2025-08-01 01:31:12,126 | WARNING | pyMut.annotate.actionable_mutation | Gene does not exist for variant at index 547 in batch 1 2025-08-01 01:31:12,126 | WARNING | pyMut.annotate.actionable_mutation | Unknown oncogenicity for variant at index 547 in batch 1 2025-08-01 01:31:12,126 | WARNING | pyMut.annotate.actionable_mutation | Gene does not exist for variant at index 548 in batch 1 2025-08-01 01:31:12,126 | WARNING | pyMut.annotate.actionable_mutation | Unknown oncogenicity for variant at index 548 in batch 1 2025-08-01 01:31:12,127 | WARNING | pyMut.annotate.actionable_mutation | Gene does not exist for variant at index 549 in batch 1 2025-08-01 01:31:12,127 | WARNING | pyMut.annotate.actionable_mutation | Unknown oncogenicity for variant at index 549 in batch 1 2025-08-01 01:31:12,127 | WARNING | pyMut.annotate.actionable_mutation | Gene does not exist for variant at index 550 in batch 1 2025-08-01 01:31:12,127 | WARNING | pyMut.annotate.actionable_mutation | Unknown oncogenicity for variant at index 550 in batch 1 2025-08-01 01:31:12,128 | WARNING | pyMut.annotate.actionable_mutation | Gene does not exist for variant at index 551 in batch 1 2025-08-01 01:31:12,128 | WARNING | pyMut.annotate.actionable_mutation | Unknown oncogenicity for variant at index 551 in batch 1 2025-08-01 01:31:12,128 | WARNING | pyMut.annotate.actionable_mutation | Gene does not exist for variant at index 552 in batch 1 2025-08-01 01:31:12,128 | WARNING | pyMut.annotate.actionable_mutation | Unknown oncogenicity for variant at index 552 in batch 1 2025-08-01 01:31:12,128 | WARNING | pyMut.annotate.actionable_mutation | Gene does not exist for variant at index 553 in batch 1 2025-08-01 01:31:12,129 | WARNING | pyMut.annotate.actionable_mutation | Unknown oncogenicity for variant at index 553 in batch 1 2025-08-01 01:31:12,129 | WARNING | pyMut.annotate.actionable_mutation | Unknown oncogenicity for variant at index 554 in batch 1 2025-08-01 01:31:12,129 | WARNING | pyMut.annotate.actionable_mutation | Unknown oncogenicity for variant at index 555 in batch 1 2025-08-01 01:31:12,129 | WARNING | pyMut.annotate.actionable_mutation | Gene does not exist for variant at index 556 in batch 1 2025-08-01 01:31:12,130 | WARNING | pyMut.annotate.actionable_mutation | Unknown oncogenicity for variant at index 556 in batch 1 2025-08-01 01:31:12,130 | WARNING | pyMut.annotate.actionable_mutation | Gene does not exist for variant at index 557 in batch 1 2025-08-01 01:31:12,130 | WARNING | pyMut.annotate.actionable_mutation | Unknown oncogenicity for variant at index 557 in batch 1 2025-08-01 01:31:12,130 | WARNING | pyMut.annotate.actionable_mutation | Gene does not exist for variant at index 558 in batch 1 2025-08-01 01:31:12,130 | WARNING | pyMut.annotate.actionable_mutation | Unknown oncogenicity for variant at index 558 in batch 1 2025-08-01 01:31:12,131 | WARNING | pyMut.annotate.actionable_mutation | Gene does not exist for variant at index 559 in batch 1 2025-08-01 01:31:12,133 | WARNING | pyMut.annotate.actionable_mutation | Unknown oncogenicity for variant at index 559 in batch 1 2025-08-01 01:31:12,133 | WARNING | pyMut.annotate.actionable_mutation | Gene does not exist for variant at index 560 in batch 1 2025-08-01 01:31:12,133 | WARNING | pyMut.annotate.actionable_mutation | Unknown oncogenicity for variant at index 560 in batch 1 2025-08-01 01:31:12,133 | WARNING | pyMut.annotate.actionable_mutation | Gene does not exist for variant at index 561 in batch 1 2025-08-01 01:31:12,134 | WARNING | pyMut.annotate.actionable_mutation | Unknown oncogenicity for variant at index 561 in batch 1 2025-08-01 01:31:12,134 | WARNING | pyMut.annotate.actionable_mutation | Gene does not exist for variant at index 562 in batch 1 2025-08-01 01:31:12,134 | WARNING | pyMut.annotate.actionable_mutation | Unknown oncogenicity for variant at index 562 in batch 1 2025-08-01 01:31:12,134 | WARNING | pyMut.annotate.actionable_mutation | Gene does not exist for variant at index 563 in batch 1 2025-08-01 01:31:12,135 | WARNING | pyMut.annotate.actionable_mutation | Unknown oncogenicity for variant at index 563 in batch 1 2025-08-01 01:31:12,135 | WARNING | pyMut.annotate.actionable_mutation | Gene does not exist for variant at index 564 in batch 1 2025-08-01 01:31:12,135 | WARNING | pyMut.annotate.actionable_mutation | Unknown oncogenicity for variant at index 564 in batch 1 2025-08-01 01:31:12,136 | WARNING | pyMut.annotate.actionable_mutation | Gene does not exist for variant at index 565 in batch 1 2025-08-01 01:31:12,136 | WARNING | pyMut.annotate.actionable_mutation | Unknown oncogenicity for variant at index 565 in batch 1 2025-08-01 01:31:12,136 | WARNING | pyMut.annotate.actionable_mutation | Gene does not exist for variant at index 566 in batch 1 2025-08-01 01:31:12,136 | WARNING | pyMut.annotate.actionable_mutation | Unknown oncogenicity for variant at index 566 in batch 1 2025-08-01 01:31:12,136 | WARNING | pyMut.annotate.actionable_mutation | Gene does not exist for variant at index 567 in batch 1 2025-08-01 01:31:12,137 | WARNING | pyMut.annotate.actionable_mutation | Unknown oncogenicity for variant at index 567 in batch 1 2025-08-01 01:31:12,137 | WARNING | pyMut.annotate.actionable_mutation | Gene does not exist for variant at index 568 in batch 1 2025-08-01 01:31:12,137 | WARNING | pyMut.annotate.actionable_mutation | Unknown oncogenicity for variant at index 568 in batch 1 2025-08-01 01:31:12,137 | WARNING | pyMut.annotate.actionable_mutation | Gene does not exist for variant at index 569 in batch 1 2025-08-01 01:31:12,138 | WARNING | pyMut.annotate.actionable_mutation | Unknown oncogenicity for variant at index 569 in batch 1 2025-08-01 01:31:12,138 | WARNING | pyMut.annotate.actionable_mutation | Unknown oncogenicity for variant at index 570 in batch 1 2025-08-01 01:31:12,138 | WARNING | pyMut.annotate.actionable_mutation | Gene does not exist for variant at index 571 in batch 1 2025-08-01 01:31:12,138 | WARNING | pyMut.annotate.actionable_mutation | Unknown oncogenicity for variant at index 571 in batch 1 2025-08-01 01:31:12,138 | WARNING | pyMut.annotate.actionable_mutation | Gene does not exist for variant at index 572 in batch 1 2025-08-01 01:31:12,139 | WARNING | pyMut.annotate.actionable_mutation | Unknown oncogenicity for variant at index 572 in batch 1 2025-08-01 01:31:12,139 | WARNING | pyMut.annotate.actionable_mutation | Gene does not exist for variant at index 573 in batch 1 2025-08-01 01:31:12,139 | WARNING | pyMut.annotate.actionable_mutation | Unknown oncogenicity for variant at index 573 in batch 1 2025-08-01 01:31:12,139 | WARNING | pyMut.annotate.actionable_mutation | Gene does not exist for variant at index 574 in batch 1 2025-08-01 01:31:12,140 | WARNING | pyMut.annotate.actionable_mutation | Unknown oncogenicity for variant at index 574 in batch 1 2025-08-01 01:31:12,140 | WARNING | pyMut.annotate.actionable_mutation | Gene does not exist for variant at index 575 in batch 1 2025-08-01 01:31:12,140 | WARNING | pyMut.annotate.actionable_mutation | Unknown oncogenicity for variant at index 575 in batch 1 2025-08-01 01:31:12,140 | WARNING | pyMut.annotate.actionable_mutation | Gene does not exist for variant at index 576 in batch 1 2025-08-01 01:31:12,141 | WARNING | pyMut.annotate.actionable_mutation | Unknown oncogenicity for variant at index 576 in batch 1 2025-08-01 01:31:12,141 | WARNING | pyMut.annotate.actionable_mutation | Gene does not exist for variant at index 577 in batch 1 2025-08-01 01:31:12,141 | WARNING | pyMut.annotate.actionable_mutation | Unknown oncogenicity for variant at index 577 in batch 1 2025-08-01 01:31:12,143 | WARNING | pyMut.annotate.actionable_mutation | Gene does not exist for variant at index 578 in batch 1 2025-08-01 01:31:12,143 | WARNING | pyMut.annotate.actionable_mutation | Unknown oncogenicity for variant at index 578 in batch 1 2025-08-01 01:31:12,143 | WARNING | pyMut.annotate.actionable_mutation | Gene does not exist for variant at index 579 in batch 1 2025-08-01 01:31:12,143 | WARNING | pyMut.annotate.actionable_mutation | Unknown oncogenicity for variant at index 579 in batch 1 2025-08-01 01:31:12,144 | WARNING | pyMut.annotate.actionable_mutation | Gene does not exist for variant at index 580 in batch 1 2025-08-01 01:31:12,145 | WARNING | pyMut.annotate.actionable_mutation | Unknown oncogenicity for variant at index 580 in batch 1 2025-08-01 01:31:12,145 | WARNING | pyMut.annotate.actionable_mutation | Gene does not exist for variant at index 581 in batch 1 2025-08-01 01:31:12,145 | WARNING | pyMut.annotate.actionable_mutation | Unknown oncogenicity for variant at index 581 in batch 1 2025-08-01 01:31:12,146 | WARNING | pyMut.annotate.actionable_mutation | Gene does not exist for variant at index 582 in batch 1 2025-08-01 01:31:12,146 | WARNING | pyMut.annotate.actionable_mutation | Unknown oncogenicity for variant at index 582 in batch 1 2025-08-01 01:31:12,146 | WARNING | pyMut.annotate.actionable_mutation | Gene does not exist for variant at index 583 in batch 1 2025-08-01 01:31:12,146 | WARNING | pyMut.annotate.actionable_mutation | Unknown oncogenicity for variant at index 583 in batch 1 2025-08-01 01:31:12,147 | WARNING | pyMut.annotate.actionable_mutation | Gene does not exist for variant at index 584 in batch 1 2025-08-01 01:31:12,147 | WARNING | pyMut.annotate.actionable_mutation | Unknown oncogenicity for variant at index 584 in batch 1 2025-08-01 01:31:12,147 | WARNING | pyMut.annotate.actionable_mutation | Gene does not exist for variant at index 585 in batch 1 2025-08-01 01:31:12,147 | WARNING | pyMut.annotate.actionable_mutation | Unknown oncogenicity for variant at index 585 in batch 1 2025-08-01 01:31:12,147 | WARNING | pyMut.annotate.actionable_mutation | Gene does not exist for variant at index 586 in batch 1 2025-08-01 01:31:12,147 | WARNING | pyMut.annotate.actionable_mutation | Unknown oncogenicity for variant at index 586 in batch 1 2025-08-01 01:31:12,148 | WARNING | pyMut.annotate.actionable_mutation | Unknown oncogenicity for variant at index 587 in batch 1 2025-08-01 01:31:12,148 | WARNING | pyMut.annotate.actionable_mutation | Gene does not exist for variant at index 588 in batch 1 2025-08-01 01:31:12,148 | WARNING | pyMut.annotate.actionable_mutation | Unknown oncogenicity for variant at index 588 in batch 1 2025-08-01 01:31:12,149 | WARNING | pyMut.annotate.actionable_mutation | Gene does not exist for variant at index 589 in batch 1 2025-08-01 01:31:12,149 | WARNING | pyMut.annotate.actionable_mutation | Unknown oncogenicity for variant at index 589 in batch 1 2025-08-01 01:31:12,149 | WARNING | pyMut.annotate.actionable_mutation | Gene does not exist for variant at index 590 in batch 1 2025-08-01 01:31:12,150 | WARNING | pyMut.annotate.actionable_mutation | Unknown oncogenicity for variant at index 590 in batch 1 2025-08-01 01:31:12,150 | WARNING | pyMut.annotate.actionable_mutation | Gene does not exist for variant at index 591 in batch 1 2025-08-01 01:31:12,150 | WARNING | pyMut.annotate.actionable_mutation | Unknown oncogenicity for variant at index 591 in batch 1 2025-08-01 01:31:12,150 | WARNING | pyMut.annotate.actionable_mutation | Gene does not exist for variant at index 592 in batch 1 2025-08-01 01:31:12,150 | WARNING | pyMut.annotate.actionable_mutation | Unknown oncogenicity for variant at index 592 in batch 1 2025-08-01 01:31:12,152 | WARNING | pyMut.annotate.actionable_mutation | Gene does not exist for variant at index 593 in batch 1 2025-08-01 01:31:12,152 | WARNING | pyMut.annotate.actionable_mutation | Unknown oncogenicity for variant at index 593 in batch 1 2025-08-01 01:31:12,152 | WARNING | pyMut.annotate.actionable_mutation | Gene does not exist for variant at index 594 in batch 1 2025-08-01 01:31:12,153 | WARNING | pyMut.annotate.actionable_mutation | Unknown oncogenicity for variant at index 594 in batch 1 2025-08-01 01:31:12,153 | WARNING | pyMut.annotate.actionable_mutation | Gene does not exist for variant at index 595 in batch 1 2025-08-01 01:31:12,155 | WARNING | pyMut.annotate.actionable_mutation | Unknown oncogenicity for variant at index 595 in batch 1 2025-08-01 01:31:12,155 | WARNING | pyMut.annotate.actionable_mutation | Gene does not exist for variant at index 596 in batch 1 2025-08-01 01:31:12,156 | WARNING | pyMut.annotate.actionable_mutation | Unknown oncogenicity for variant at index 596 in batch 1 2025-08-01 01:31:12,156 | WARNING | pyMut.annotate.actionable_mutation | Gene does not exist for variant at index 597 in batch 1 2025-08-01 01:31:12,156 | WARNING | pyMut.annotate.actionable_mutation | Unknown oncogenicity for variant at index 597 in batch 1 2025-08-01 01:31:12,156 | WARNING | pyMut.annotate.actionable_mutation | Gene does not exist for variant at index 598 in batch 1 2025-08-01 01:31:12,157 | WARNING | pyMut.annotate.actionable_mutation | Unknown oncogenicity for variant at index 598 in batch 1 2025-08-01 01:31:12,157 | WARNING | pyMut.annotate.actionable_mutation | Gene does not exist for variant at index 599 in batch 1 2025-08-01 01:31:12,158 | WARNING | pyMut.annotate.actionable_mutation | Unknown oncogenicity for variant at index 599 in batch 1 2025-08-01 01:31:12,158 | WARNING | pyMut.annotate.actionable_mutation | Gene does not exist for variant at index 600 in batch 1 2025-08-01 01:31:12,158 | WARNING | pyMut.annotate.actionable_mutation | Unknown oncogenicity for variant at index 600 in batch 1 2025-08-01 01:31:12,158 | WARNING | pyMut.annotate.actionable_mutation | Gene does not exist for variant at index 601 in batch 1 2025-08-01 01:31:12,158 | WARNING | pyMut.annotate.actionable_mutation | Unknown oncogenicity for variant at index 601 in batch 1 2025-08-01 01:31:12,159 | WARNING | pyMut.annotate.actionable_mutation | Gene does not exist for variant at index 602 in batch 1 2025-08-01 01:31:12,159 | WARNING | pyMut.annotate.actionable_mutation | Unknown oncogenicity for variant at index 602 in batch 1 2025-08-01 01:31:12,159 | WARNING | pyMut.annotate.actionable_mutation | Gene does not exist for variant at index 603 in batch 1 2025-08-01 01:31:12,159 | WARNING | pyMut.annotate.actionable_mutation | Unknown oncogenicity for variant at index 603 in batch 1 2025-08-01 01:31:12,160 | WARNING | pyMut.annotate.actionable_mutation | Gene does not exist for variant at index 604 in batch 1 2025-08-01 01:31:12,160 | WARNING | pyMut.annotate.actionable_mutation | Unknown oncogenicity for variant at index 604 in batch 1 2025-08-01 01:31:12,160 | WARNING | pyMut.annotate.actionable_mutation | Gene does not exist for variant at index 605 in batch 1 2025-08-01 01:31:12,160 | WARNING | pyMut.annotate.actionable_mutation | Unknown oncogenicity for variant at index 605 in batch 1 2025-08-01 01:31:12,161 | WARNING | pyMut.annotate.actionable_mutation | Gene does not exist for variant at index 606 in batch 1 2025-08-01 01:31:12,161 | WARNING | pyMut.annotate.actionable_mutation | Unknown oncogenicity for variant at index 606 in batch 1 2025-08-01 01:31:12,161 | WARNING | pyMut.annotate.actionable_mutation | Gene does not exist for variant at index 607 in batch 1 2025-08-01 01:31:12,161 | WARNING | pyMut.annotate.actionable_mutation | Unknown oncogenicity for variant at index 607 in batch 1 2025-08-01 01:31:12,161 | WARNING | pyMut.annotate.actionable_mutation | Gene does not exist for variant at index 608 in batch 1 2025-08-01 01:31:12,163 | WARNING | pyMut.annotate.actionable_mutation | Unknown oncogenicity for variant at index 608 in batch 1 2025-08-01 01:31:12,163 | WARNING | pyMut.annotate.actionable_mutation | Gene does not exist for variant at index 609 in batch 1 2025-08-01 01:31:12,163 | WARNING | pyMut.annotate.actionable_mutation | Unknown oncogenicity for variant at index 609 in batch 1 2025-08-01 01:31:12,163 | WARNING | pyMut.annotate.actionable_mutation | Gene does not exist for variant at index 610 in batch 1 2025-08-01 01:31:12,164 | WARNING | pyMut.annotate.actionable_mutation | Unknown oncogenicity for variant at index 610 in batch 1 2025-08-01 01:31:12,164 | WARNING | pyMut.annotate.actionable_mutation | Gene does not exist for variant at index 611 in batch 1 2025-08-01 01:31:12,164 | WARNING | pyMut.annotate.actionable_mutation | Unknown oncogenicity for variant at index 611 in batch 1 2025-08-01 01:31:12,165 | WARNING | pyMut.annotate.actionable_mutation | Gene does not exist for variant at index 612 in batch 1 2025-08-01 01:31:12,165 | WARNING | pyMut.annotate.actionable_mutation | Unknown oncogenicity for variant at index 612 in batch 1 2025-08-01 01:31:12,165 | WARNING | pyMut.annotate.actionable_mutation | Gene does not exist for variant at index 613 in batch 1 2025-08-01 01:31:12,165 | WARNING | pyMut.annotate.actionable_mutation | Unknown oncogenicity for variant at index 613 in batch 1 2025-08-01 01:31:12,165 | WARNING | pyMut.annotate.actionable_mutation | Gene does not exist for variant at index 614 in batch 1 2025-08-01 01:31:12,166 | WARNING | pyMut.annotate.actionable_mutation | Unknown oncogenicity for variant at index 614 in batch 1 2025-08-01 01:31:12,166 | WARNING | pyMut.annotate.actionable_mutation | Gene does not exist for variant at index 615 in batch 1 2025-08-01 01:31:12,167 | WARNING | pyMut.annotate.actionable_mutation | Unknown oncogenicity for variant at index 615 in batch 1 2025-08-01 01:31:12,168 | WARNING | pyMut.annotate.actionable_mutation | Gene does not exist for variant at index 616 in batch 1 2025-08-01 01:31:12,169 | WARNING | pyMut.annotate.actionable_mutation | Unknown oncogenicity for variant at index 616 in batch 1 2025-08-01 01:31:12,169 | WARNING | pyMut.annotate.actionable_mutation | Gene does not exist for variant at index 617 in batch 1 2025-08-01 01:31:12,169 | WARNING | pyMut.annotate.actionable_mutation | Unknown oncogenicity for variant at index 617 in batch 1 2025-08-01 01:31:12,169 | WARNING | pyMut.annotate.actionable_mutation | Gene does not exist for variant at index 618 in batch 1 2025-08-01 01:31:12,170 | WARNING | pyMut.annotate.actionable_mutation | Unknown oncogenicity for variant at index 618 in batch 1 2025-08-01 01:31:12,170 | WARNING | pyMut.annotate.actionable_mutation | Gene does not exist for variant at index 619 in batch 1 2025-08-01 01:31:12,171 | WARNING | pyMut.annotate.actionable_mutation | Unknown oncogenicity for variant at index 619 in batch 1 2025-08-01 01:31:12,171 | WARNING | pyMut.annotate.actionable_mutation | Gene does not exist for variant at index 620 in batch 1 2025-08-01 01:31:12,171 | WARNING | pyMut.annotate.actionable_mutation | Unknown oncogenicity for variant at index 620 in batch 1 2025-08-01 01:31:12,171 | WARNING | pyMut.annotate.actionable_mutation | Gene does not exist for variant at index 621 in batch 1 2025-08-01 01:31:12,172 | WARNING | pyMut.annotate.actionable_mutation | Unknown oncogenicity for variant at index 621 in batch 1 2025-08-01 01:31:12,172 | WARNING | pyMut.annotate.actionable_mutation | Gene does not exist for variant at index 622 in batch 1 2025-08-01 01:31:12,172 | WARNING | pyMut.annotate.actionable_mutation | Unknown oncogenicity for variant at index 622 in batch 1 2025-08-01 01:31:12,173 | WARNING | pyMut.annotate.actionable_mutation | Gene does not exist for variant at index 623 in batch 1 2025-08-01 01:31:12,173 | WARNING | pyMut.annotate.actionable_mutation | Unknown oncogenicity for variant at index 623 in batch 1 2025-08-01 01:31:12,173 | WARNING | pyMut.annotate.actionable_mutation | Gene does not exist for variant at index 628 in batch 1 2025-08-01 01:31:12,174 | WARNING | pyMut.annotate.actionable_mutation | Unknown oncogenicity for variant at index 628 in batch 1 2025-08-01 01:31:12,174 | WARNING | pyMut.annotate.actionable_mutation | Gene does not exist for variant at index 629 in batch 1 2025-08-01 01:31:12,174 | WARNING | pyMut.annotate.actionable_mutation | Unknown oncogenicity for variant at index 629 in batch 1 2025-08-01 01:31:12,174 | WARNING | pyMut.annotate.actionable_mutation | Gene does not exist for variant at index 630 in batch 1 2025-08-01 01:31:12,175 | WARNING | pyMut.annotate.actionable_mutation | Unknown oncogenicity for variant at index 630 in batch 1 2025-08-01 01:31:12,175 | WARNING | pyMut.annotate.actionable_mutation | Gene does not exist for variant at index 632 in batch 1 2025-08-01 01:31:12,175 | WARNING | pyMut.annotate.actionable_mutation | Unknown oncogenicity for variant at index 632 in batch 1 2025-08-01 01:31:12,176 | WARNING | pyMut.annotate.actionable_mutation | Gene does not exist for variant at index 633 in batch 1 2025-08-01 01:31:12,176 | WARNING | pyMut.annotate.actionable_mutation | Unknown oncogenicity for variant at index 633 in batch 1 2025-08-01 01:31:12,176 | WARNING | pyMut.annotate.actionable_mutation | Gene does not exist for variant at index 634 in batch 1 2025-08-01 01:31:12,176 | WARNING | pyMut.annotate.actionable_mutation | Unknown oncogenicity for variant at index 634 in batch 1 2025-08-01 01:31:12,177 | WARNING | pyMut.annotate.actionable_mutation | Gene does not exist for variant at index 635 in batch 1 2025-08-01 01:31:12,177 | WARNING | pyMut.annotate.actionable_mutation | Unknown oncogenicity for variant at index 635 in batch 1 2025-08-01 01:31:12,177 | WARNING | pyMut.annotate.actionable_mutation | Gene does not exist for variant at index 636 in batch 1 2025-08-01 01:31:12,177 | WARNING | pyMut.annotate.actionable_mutation | Unknown oncogenicity for variant at index 636 in batch 1 2025-08-01 01:31:12,177 | WARNING | pyMut.annotate.actionable_mutation | Gene does not exist for variant at index 637 in batch 1 2025-08-01 01:31:12,177 | WARNING | pyMut.annotate.actionable_mutation | Unknown oncogenicity for variant at index 637 in batch 1 2025-08-01 01:31:12,178 | WARNING | pyMut.annotate.actionable_mutation | Gene does not exist for variant at index 638 in batch 1 2025-08-01 01:31:12,178 | WARNING | pyMut.annotate.actionable_mutation | Unknown oncogenicity for variant at index 638 in batch 1 2025-08-01 01:31:12,178 | WARNING | pyMut.annotate.actionable_mutation | Gene does not exist for variant at index 639 in batch 1 2025-08-01 01:31:12,179 | WARNING | pyMut.annotate.actionable_mutation | Unknown oncogenicity for variant at index 639 in batch 1 2025-08-01 01:31:12,179 | WARNING | pyMut.annotate.actionable_mutation | Gene does not exist for variant at index 640 in batch 1 2025-08-01 01:31:12,179 | WARNING | pyMut.annotate.actionable_mutation | Unknown oncogenicity for variant at index 640 in batch 1 2025-08-01 01:31:12,180 | WARNING | pyMut.annotate.actionable_mutation | Gene does not exist for variant at index 641 in batch 1 2025-08-01 01:31:12,180 | WARNING | pyMut.annotate.actionable_mutation | Unknown oncogenicity for variant at index 641 in batch 1 2025-08-01 01:31:12,181 | WARNING | pyMut.annotate.actionable_mutation | Gene does not exist for variant at index 642 in batch 1 2025-08-01 01:31:12,181 | WARNING | pyMut.annotate.actionable_mutation | Unknown oncogenicity for variant at index 642 in batch 1 2025-08-01 01:31:12,181 | WARNING | pyMut.annotate.actionable_mutation | Gene does not exist for variant at index 643 in batch 1 2025-08-01 01:31:12,182 | WARNING | pyMut.annotate.actionable_mutation | Unknown oncogenicity for variant at index 643 in batch 1 2025-08-01 01:31:12,182 | WARNING | pyMut.annotate.actionable_mutation | Unknown oncogenicity for variant at index 644 in batch 1 2025-08-01 01:31:12,183 | WARNING | pyMut.annotate.actionable_mutation | Gene does not exist for variant at index 645 in batch 1 2025-08-01 01:31:12,183 | WARNING | pyMut.annotate.actionable_mutation | Unknown oncogenicity for variant at index 645 in batch 1 2025-08-01 01:31:12,183 | WARNING | pyMut.annotate.actionable_mutation | Gene does not exist for variant at index 646 in batch 1 2025-08-01 01:31:12,183 | WARNING | pyMut.annotate.actionable_mutation | Unknown oncogenicity for variant at index 646 in batch 1 2025-08-01 01:31:12,184 | WARNING | pyMut.annotate.actionable_mutation | Unknown oncogenicity for variant at index 647 in batch 1 2025-08-01 01:31:12,184 | WARNING | pyMut.annotate.actionable_mutation | Unknown oncogenicity for variant at index 648 in batch 1 2025-08-01 01:31:12,184 | WARNING | pyMut.annotate.actionable_mutation | Gene does not exist for variant at index 649 in batch 1 2025-08-01 01:31:12,184 | WARNING | pyMut.annotate.actionable_mutation | Unknown oncogenicity for variant at index 649 in batch 1 2025-08-01 01:31:12,185 | WARNING | pyMut.annotate.actionable_mutation | Gene does not exist for variant at index 650 in batch 1 2025-08-01 01:31:12,185 | WARNING | pyMut.annotate.actionable_mutation | Unknown oncogenicity for variant at index 650 in batch 1 2025-08-01 01:31:12,185 | WARNING | pyMut.annotate.actionable_mutation | Gene does not exist for variant at index 651 in batch 1 2025-08-01 01:31:12,186 | WARNING | pyMut.annotate.actionable_mutation | Unknown oncogenicity for variant at index 651 in batch 1 2025-08-01 01:31:12,186 | WARNING | pyMut.annotate.actionable_mutation | Gene does not exist for variant at index 652 in batch 1 2025-08-01 01:31:12,186 | WARNING | pyMut.annotate.actionable_mutation | Unknown oncogenicity for variant at index 652 in batch 1 2025-08-01 01:31:12,186 | WARNING | pyMut.annotate.actionable_mutation | Gene does not exist for variant at index 653 in batch 1 2025-08-01 01:31:12,187 | WARNING | pyMut.annotate.actionable_mutation | Unknown oncogenicity for variant at index 653 in batch 1 2025-08-01 01:31:12,187 | WARNING | pyMut.annotate.actionable_mutation | Unknown oncogenicity for variant at index 654 in batch 1 2025-08-01 01:31:12,188 | WARNING | pyMut.annotate.actionable_mutation | Gene does not exist for variant at index 655 in batch 1 2025-08-01 01:31:12,188 | WARNING | pyMut.annotate.actionable_mutation | Unknown oncogenicity for variant at index 655 in batch 1 2025-08-01 01:31:12,188 | WARNING | pyMut.annotate.actionable_mutation | Gene does not exist for variant at index 656 in batch 1 2025-08-01 01:31:12,188 | WARNING | pyMut.annotate.actionable_mutation | Unknown oncogenicity for variant at index 656 in batch 1 2025-08-01 01:31:12,189 | WARNING | pyMut.annotate.actionable_mutation | Gene does not exist for variant at index 657 in batch 1 2025-08-01 01:31:12,189 | WARNING | pyMut.annotate.actionable_mutation | Unknown oncogenicity for variant at index 657 in batch 1 2025-08-01 01:31:12,189 | WARNING | pyMut.annotate.actionable_mutation | Gene does not exist for variant at index 658 in batch 1 2025-08-01 01:31:12,189 | WARNING | pyMut.annotate.actionable_mutation | Unknown oncogenicity for variant at index 658 in batch 1 2025-08-01 01:31:12,189 | WARNING | pyMut.annotate.actionable_mutation | Gene does not exist for variant at index 659 in batch 1 2025-08-01 01:31:12,190 | WARNING | pyMut.annotate.actionable_mutation | Unknown oncogenicity for variant at index 659 in batch 1 2025-08-01 01:31:12,190 | WARNING | pyMut.annotate.actionable_mutation | Gene does not exist for variant at index 660 in batch 1 2025-08-01 01:31:12,190 | WARNING | pyMut.annotate.actionable_mutation | Unknown oncogenicity for variant at index 660 in batch 1 2025-08-01 01:31:12,190 | WARNING | pyMut.annotate.actionable_mutation | Gene does not exist for variant at index 661 in batch 1 2025-08-01 01:31:12,191 | WARNING | pyMut.annotate.actionable_mutation | Unknown oncogenicity for variant at index 661 in batch 1 2025-08-01 01:31:12,191 | WARNING | pyMut.annotate.actionable_mutation | Unknown oncogenicity for variant at index 662 in batch 1 2025-08-01 01:31:12,191 | WARNING | pyMut.annotate.actionable_mutation | Unknown oncogenicity for variant at index 663 in batch 1 2025-08-01 01:31:12,191 | WARNING | pyMut.annotate.actionable_mutation | Gene does not exist for variant at index 664 in batch 1 2025-08-01 01:31:12,192 | WARNING | pyMut.annotate.actionable_mutation | Unknown oncogenicity for variant at index 664 in batch 1 2025-08-01 01:31:12,192 | WARNING | pyMut.annotate.actionable_mutation | Gene does not exist for variant at index 665 in batch 1 2025-08-01 01:31:12,192 | WARNING | pyMut.annotate.actionable_mutation | Unknown oncogenicity for variant at index 665 in batch 1 2025-08-01 01:31:12,192 | WARNING | pyMut.annotate.actionable_mutation | Gene does not exist for variant at index 666 in batch 1 2025-08-01 01:31:12,193 | WARNING | pyMut.annotate.actionable_mutation | Unknown oncogenicity for variant at index 666 in batch 1 2025-08-01 01:31:12,193 | WARNING | pyMut.annotate.actionable_mutation | Gene does not exist for variant at index 667 in batch 1 2025-08-01 01:31:12,193 | WARNING | pyMut.annotate.actionable_mutation | Unknown oncogenicity for variant at index 667 in batch 1 2025-08-01 01:31:12,193 | WARNING | pyMut.annotate.actionable_mutation | Gene does not exist for variant at index 668 in batch 1 2025-08-01 01:31:12,193 | WARNING | pyMut.annotate.actionable_mutation | Unknown oncogenicity for variant at index 668 in batch 1 2025-08-01 01:31:12,194 | WARNING | pyMut.annotate.actionable_mutation | Gene does not exist for variant at index 669 in batch 1 2025-08-01 01:31:12,194 | WARNING | pyMut.annotate.actionable_mutation | Unknown oncogenicity for variant at index 669 in batch 1 2025-08-01 01:31:12,194 | WARNING | pyMut.annotate.actionable_mutation | Gene does not exist for variant at index 670 in batch 1 2025-08-01 01:31:12,194 | WARNING | pyMut.annotate.actionable_mutation | Unknown oncogenicity for variant at index 670 in batch 1 2025-08-01 01:31:12,194 | WARNING | pyMut.annotate.actionable_mutation | Gene does not exist for variant at index 671 in batch 1 2025-08-01 01:31:12,195 | WARNING | pyMut.annotate.actionable_mutation | Unknown oncogenicity for variant at index 671 in batch 1 2025-08-01 01:31:12,195 | WARNING | pyMut.annotate.actionable_mutation | Gene does not exist for variant at index 672 in batch 1 2025-08-01 01:31:12,195 | WARNING | pyMut.annotate.actionable_mutation | Unknown oncogenicity for variant at index 672 in batch 1 2025-08-01 01:31:12,195 | WARNING | pyMut.annotate.actionable_mutation | Gene does not exist for variant at index 673 in batch 1 2025-08-01 01:31:12,195 | WARNING | pyMut.annotate.actionable_mutation | Unknown oncogenicity for variant at index 673 in batch 1 2025-08-01 01:31:12,196 | WARNING | pyMut.annotate.actionable_mutation | Gene does not exist for variant at index 674 in batch 1 2025-08-01 01:31:12,196 | WARNING | pyMut.annotate.actionable_mutation | Unknown oncogenicity for variant at index 674 in batch 1 2025-08-01 01:31:12,199 | WARNING | pyMut.annotate.actionable_mutation | Gene does not exist for variant at index 675 in batch 1 2025-08-01 01:31:12,199 | WARNING | pyMut.annotate.actionable_mutation | Unknown oncogenicity for variant at index 675 in batch 1 2025-08-01 01:31:12,199 | WARNING | pyMut.annotate.actionable_mutation | Unknown oncogenicity for variant at index 676 in batch 1 2025-08-01 01:31:12,200 | WARNING | pyMut.annotate.actionable_mutation | Unknown oncogenicity for variant at index 677 in batch 1 2025-08-01 01:31:12,200 | WARNING | pyMut.annotate.actionable_mutation | Unknown oncogenicity for variant at index 678 in batch 1 2025-08-01 01:31:12,200 | WARNING | pyMut.annotate.actionable_mutation | Gene does not exist for variant at index 679 in batch 1 2025-08-01 01:31:12,201 | WARNING | pyMut.annotate.actionable_mutation | Unknown oncogenicity for variant at index 679 in batch 1 2025-08-01 01:31:12,201 | WARNING | pyMut.annotate.actionable_mutation | Gene does not exist for variant at index 680 in batch 1 2025-08-01 01:31:12,201 | WARNING | pyMut.annotate.actionable_mutation | Unknown oncogenicity for variant at index 680 in batch 1 2025-08-01 01:31:12,201 | WARNING | pyMut.annotate.actionable_mutation | Gene does not exist for variant at index 681 in batch 1 2025-08-01 01:31:12,202 | WARNING | pyMut.annotate.actionable_mutation | Unknown oncogenicity for variant at index 681 in batch 1 2025-08-01 01:31:12,203 | WARNING | pyMut.annotate.actionable_mutation | Gene does not exist for variant at index 682 in batch 1 2025-08-01 01:31:12,203 | WARNING | pyMut.annotate.actionable_mutation | Unknown oncogenicity for variant at index 682 in batch 1 2025-08-01 01:31:12,203 | WARNING | pyMut.annotate.actionable_mutation | Gene does not exist for variant at index 683 in batch 1 2025-08-01 01:31:12,204 | WARNING | pyMut.annotate.actionable_mutation | Unknown oncogenicity for variant at index 683 in batch 1 2025-08-01 01:31:12,204 | WARNING | pyMut.annotate.actionable_mutation | Gene does not exist for variant at index 684 in batch 1 2025-08-01 01:31:12,204 | WARNING | pyMut.annotate.actionable_mutation | Unknown oncogenicity for variant at index 684 in batch 1 2025-08-01 01:31:12,204 | WARNING | pyMut.annotate.actionable_mutation | Gene does not exist for variant at index 685 in batch 1 2025-08-01 01:31:12,205 | WARNING | pyMut.annotate.actionable_mutation | Unknown oncogenicity for variant at index 685 in batch 1 2025-08-01 01:31:12,205 | WARNING | pyMut.annotate.actionable_mutation | Gene does not exist for variant at index 686 in batch 1 2025-08-01 01:31:12,205 | WARNING | pyMut.annotate.actionable_mutation | Unknown oncogenicity for variant at index 686 in batch 1 2025-08-01 01:31:12,205 | WARNING | pyMut.annotate.actionable_mutation | Gene does not exist for variant at index 687 in batch 1 2025-08-01 01:31:12,206 | WARNING | pyMut.annotate.actionable_mutation | Unknown oncogenicity for variant at index 687 in batch 1 2025-08-01 01:31:12,206 | WARNING | pyMut.annotate.actionable_mutation | Gene does not exist for variant at index 688 in batch 1 2025-08-01 01:31:12,206 | WARNING | pyMut.annotate.actionable_mutation | Unknown oncogenicity for variant at index 688 in batch 1 2025-08-01 01:31:12,206 | WARNING | pyMut.annotate.actionable_mutation | Gene does not exist for variant at index 689 in batch 1 2025-08-01 01:31:12,208 | WARNING | pyMut.annotate.actionable_mutation | Unknown oncogenicity for variant at index 689 in batch 1 2025-08-01 01:31:12,208 | WARNING | pyMut.annotate.actionable_mutation | Gene does not exist for variant at index 690 in batch 1 2025-08-01 01:31:12,209 | WARNING | pyMut.annotate.actionable_mutation | Unknown oncogenicity for variant at index 690 in batch 1 2025-08-01 01:31:12,209 | WARNING | pyMut.annotate.actionable_mutation | Gene does not exist for variant at index 691 in batch 1 2025-08-01 01:31:12,209 | WARNING | pyMut.annotate.actionable_mutation | Unknown oncogenicity for variant at index 691 in batch 1 2025-08-01 01:31:12,209 | WARNING | pyMut.annotate.actionable_mutation | Gene does not exist for variant at index 692 in batch 1 2025-08-01 01:31:12,210 | WARNING | pyMut.annotate.actionable_mutation | Unknown oncogenicity for variant at index 692 in batch 1 2025-08-01 01:31:12,210 | WARNING | pyMut.annotate.actionable_mutation | Gene does not exist for variant at index 693 in batch 1 2025-08-01 01:31:12,210 | WARNING | pyMut.annotate.actionable_mutation | Unknown oncogenicity for variant at index 693 in batch 1 2025-08-01 01:31:12,211 | WARNING | pyMut.annotate.actionable_mutation | Gene does not exist for variant at index 694 in batch 1 2025-08-01 01:31:12,212 | WARNING | pyMut.annotate.actionable_mutation | Unknown oncogenicity for variant at index 694 in batch 1 2025-08-01 01:31:12,212 | WARNING | pyMut.annotate.actionable_mutation | Gene does not exist for variant at index 695 in batch 1 2025-08-01 01:31:12,212 | WARNING | pyMut.annotate.actionable_mutation | Unknown oncogenicity for variant at index 695 in batch 1 2025-08-01 01:31:12,213 | WARNING | pyMut.annotate.actionable_mutation | Gene does not exist for variant at index 696 in batch 1 2025-08-01 01:31:12,213 | WARNING | pyMut.annotate.actionable_mutation | Unknown oncogenicity for variant at index 696 in batch 1 2025-08-01 01:31:12,237 | INFO | pyMut.annotate.actionable_mutation | Sleeping for 1 second before processing next batch 2025-08-01 01:31:13,239 | INFO | pyMut.annotate.actionable_mutation | Processing batch 2/3 with 697 variants 2025-08-01 01:31:13,268 | INFO | pyMut.annotate.actionable_mutation | Sending batch 2/3 to OncoKB API 2025-08-01 01:31:13,268 | INFO | root | API Request URL: https://www.oncokb.org/api/v1/annotate/mutations/byGenomicChange 2025-08-01 01:31:15,992 | INFO | root | API Response Status Code: 200 2025-08-01 01:31:16,070 | INFO | pyMut.annotate.actionable_mutation | Batch 2/3 processed successfully 2025-08-01 01:31:16,070 | WARNING | pyMut.annotate.actionable_mutation | Gene does not exist for variant at index 0 in batch 2 2025-08-01 01:31:16,071 | WARNING | pyMut.annotate.actionable_mutation | Unknown oncogenicity for variant at index 0 in batch 2 2025-08-01 01:31:16,071 | WARNING | pyMut.annotate.actionable_mutation | Gene does not exist for variant at index 1 in batch 2 2025-08-01 01:31:16,072 | WARNING | pyMut.annotate.actionable_mutation | Unknown oncogenicity for variant at index 1 in batch 2 2025-08-01 01:31:16,072 | WARNING | pyMut.annotate.actionable_mutation | Gene does not exist for variant at index 2 in batch 2 2025-08-01 01:31:16,072 | WARNING | pyMut.annotate.actionable_mutation | Unknown oncogenicity for variant at index 2 in batch 2 2025-08-01 01:31:16,073 | WARNING | pyMut.annotate.actionable_mutation | Gene does not exist for variant at index 3 in batch 2 2025-08-01 01:31:16,073 | WARNING | pyMut.annotate.actionable_mutation | Unknown oncogenicity for variant at index 3 in batch 2 2025-08-01 01:31:16,073 | WARNING | pyMut.annotate.actionable_mutation | Gene does not exist for variant at index 4 in batch 2 2025-08-01 01:31:16,074 | WARNING | pyMut.annotate.actionable_mutation | Unknown oncogenicity for variant at index 4 in batch 2 2025-08-01 01:31:16,074 | WARNING | pyMut.annotate.actionable_mutation | Gene does not exist for variant at index 5 in batch 2 2025-08-01 01:31:16,074 | WARNING | pyMut.annotate.actionable_mutation | Unknown oncogenicity for variant at index 5 in batch 2 2025-08-01 01:31:16,074 | WARNING | pyMut.annotate.actionable_mutation | Gene does not exist for variant at index 6 in batch 2 2025-08-01 01:31:16,074 | WARNING | pyMut.annotate.actionable_mutation | Unknown oncogenicity for variant at index 6 in batch 2 2025-08-01 01:31:16,075 | WARNING | pyMut.annotate.actionable_mutation | Unknown oncogenicity for variant at index 7 in batch 2 2025-08-01 01:31:16,075 | WARNING | pyMut.annotate.actionable_mutation | Gene does not exist for variant at index 8 in batch 2 2025-08-01 01:31:16,075 | WARNING | pyMut.annotate.actionable_mutation | Unknown oncogenicity for variant at index 8 in batch 2 2025-08-01 01:31:16,076 | WARNING | pyMut.annotate.actionable_mutation | Gene does not exist for variant at index 9 in batch 2 2025-08-01 01:31:16,076 | WARNING | pyMut.annotate.actionable_mutation | Unknown oncogenicity for variant at index 9 in batch 2 2025-08-01 01:31:16,076 | WARNING | pyMut.annotate.actionable_mutation | Gene does not exist for variant at index 10 in batch 2 2025-08-01 01:31:16,077 | WARNING | pyMut.annotate.actionable_mutation | Unknown oncogenicity for variant at index 10 in batch 2 2025-08-01 01:31:16,077 | WARNING | pyMut.annotate.actionable_mutation | Gene does not exist for variant at index 11 in batch 2 2025-08-01 01:31:16,077 | WARNING | pyMut.annotate.actionable_mutation | Unknown oncogenicity for variant at index 11 in batch 2 2025-08-01 01:31:16,078 | WARNING | pyMut.annotate.actionable_mutation | Gene does not exist for variant at index 12 in batch 2 2025-08-01 01:31:16,078 | WARNING | pyMut.annotate.actionable_mutation | Unknown oncogenicity for variant at index 12 in batch 2 2025-08-01 01:31:16,078 | WARNING | pyMut.annotate.actionable_mutation | Gene does not exist for variant at index 15 in batch 2 2025-08-01 01:31:16,078 | WARNING | pyMut.annotate.actionable_mutation | Unknown oncogenicity for variant at index 15 in batch 2 2025-08-01 01:31:16,079 | WARNING | pyMut.annotate.actionable_mutation | Gene does not exist for variant at index 16 in batch 2 2025-08-01 01:31:16,079 | WARNING | pyMut.annotate.actionable_mutation | Unknown oncogenicity for variant at index 16 in batch 2 2025-08-01 01:31:16,079 | WARNING | pyMut.annotate.actionable_mutation | Gene does not exist for variant at index 18 in batch 2 2025-08-01 01:31:16,080 | WARNING | pyMut.annotate.actionable_mutation | Unknown oncogenicity for variant at index 18 in batch 2 2025-08-01 01:31:16,080 | WARNING | pyMut.annotate.actionable_mutation | Gene does not exist for variant at index 19 in batch 2 2025-08-01 01:31:16,081 | WARNING | pyMut.annotate.actionable_mutation | Unknown oncogenicity for variant at index 19 in batch 2 2025-08-01 01:31:16,081 | WARNING | pyMut.annotate.actionable_mutation | Gene does not exist for variant at index 20 in batch 2 2025-08-01 01:31:16,081 | WARNING | pyMut.annotate.actionable_mutation | Unknown oncogenicity for variant at index 20 in batch 2 2025-08-01 01:31:16,081 | WARNING | pyMut.annotate.actionable_mutation | Gene does not exist for variant at index 21 in batch 2 2025-08-01 01:31:16,082 | WARNING | pyMut.annotate.actionable_mutation | Unknown oncogenicity for variant at index 21 in batch 2 2025-08-01 01:31:16,082 | WARNING | pyMut.annotate.actionable_mutation | Unknown oncogenicity for variant at index 22 in batch 2 2025-08-01 01:31:16,082 | WARNING | pyMut.annotate.actionable_mutation | Gene does not exist for variant at index 23 in batch 2 2025-08-01 01:31:16,083 | WARNING | pyMut.annotate.actionable_mutation | Unknown oncogenicity for variant at index 23 in batch 2 2025-08-01 01:31:16,083 | WARNING | pyMut.annotate.actionable_mutation | Gene does not exist for variant at index 24 in batch 2 2025-08-01 01:31:16,084 | WARNING | pyMut.annotate.actionable_mutation | Unknown oncogenicity for variant at index 24 in batch 2 2025-08-01 01:31:16,084 | WARNING | pyMut.annotate.actionable_mutation | Gene does not exist for variant at index 25 in batch 2 2025-08-01 01:31:16,084 | WARNING | pyMut.annotate.actionable_mutation | Unknown oncogenicity for variant at index 25 in batch 2 2025-08-01 01:31:16,085 | WARNING | pyMut.annotate.actionable_mutation | Gene does not exist for variant at index 26 in batch 2 2025-08-01 01:31:16,085 | WARNING | pyMut.annotate.actionable_mutation | Unknown oncogenicity for variant at index 26 in batch 2 2025-08-01 01:31:16,085 | WARNING | pyMut.annotate.actionable_mutation | Gene does not exist for variant at index 27 in batch 2 2025-08-01 01:31:16,085 | WARNING | pyMut.annotate.actionable_mutation | Unknown oncogenicity for variant at index 27 in batch 2 2025-08-01 01:31:16,085 | WARNING | pyMut.annotate.actionable_mutation | Gene does not exist for variant at index 28 in batch 2 2025-08-01 01:31:16,086 | WARNING | pyMut.annotate.actionable_mutation | Unknown oncogenicity for variant at index 28 in batch 2 2025-08-01 01:31:16,086 | WARNING | pyMut.annotate.actionable_mutation | Gene does not exist for variant at index 29 in batch 2 2025-08-01 01:31:16,086 | WARNING | pyMut.annotate.actionable_mutation | Unknown oncogenicity for variant at index 29 in batch 2 2025-08-01 01:31:16,087 | WARNING | pyMut.annotate.actionable_mutation | Gene does not exist for variant at index 30 in batch 2 2025-08-01 01:31:16,087 | WARNING | pyMut.annotate.actionable_mutation | Unknown oncogenicity for variant at index 30 in batch 2 2025-08-01 01:31:16,087 | WARNING | pyMut.annotate.actionable_mutation | Gene does not exist for variant at index 31 in batch 2 2025-08-01 01:31:16,087 | WARNING | pyMut.annotate.actionable_mutation | Unknown oncogenicity for variant at index 31 in batch 2 2025-08-01 01:31:16,088 | WARNING | pyMut.annotate.actionable_mutation | Gene does not exist for variant at index 32 in batch 2 2025-08-01 01:31:16,088 | WARNING | pyMut.annotate.actionable_mutation | Unknown oncogenicity for variant at index 32 in batch 2 2025-08-01 01:31:16,088 | WARNING | pyMut.annotate.actionable_mutation | Gene does not exist for variant at index 33 in batch 2 2025-08-01 01:31:16,089 | WARNING | pyMut.annotate.actionable_mutation | Unknown oncogenicity for variant at index 33 in batch 2 2025-08-01 01:31:16,089 | WARNING | pyMut.annotate.actionable_mutation | Gene does not exist for variant at index 34 in batch 2 2025-08-01 01:31:16,089 | WARNING | pyMut.annotate.actionable_mutation | Unknown oncogenicity for variant at index 34 in batch 2 2025-08-01 01:31:16,089 | WARNING | pyMut.annotate.actionable_mutation | Gene does not exist for variant at index 35 in batch 2 2025-08-01 01:31:16,090 | WARNING | pyMut.annotate.actionable_mutation | Unknown oncogenicity for variant at index 35 in batch 2 2025-08-01 01:31:16,090 | WARNING | pyMut.annotate.actionable_mutation | Gene does not exist for variant at index 36 in batch 2 2025-08-01 01:31:16,090 | WARNING | pyMut.annotate.actionable_mutation | Unknown oncogenicity for variant at index 36 in batch 2 2025-08-01 01:31:16,090 | WARNING | pyMut.annotate.actionable_mutation | Gene does not exist for variant at index 37 in batch 2 2025-08-01 01:31:16,090 | WARNING | pyMut.annotate.actionable_mutation | Unknown oncogenicity for variant at index 37 in batch 2 2025-08-01 01:31:16,091 | WARNING | pyMut.annotate.actionable_mutation | Gene does not exist for variant at index 38 in batch 2 2025-08-01 01:31:16,091 | WARNING | pyMut.annotate.actionable_mutation | Unknown oncogenicity for variant at index 38 in batch 2 2025-08-01 01:31:16,091 | WARNING | pyMut.annotate.actionable_mutation | Gene does not exist for variant at index 39 in batch 2 2025-08-01 01:31:16,092 | WARNING | pyMut.annotate.actionable_mutation | Unknown oncogenicity for variant at index 39 in batch 2 2025-08-01 01:31:16,092 | WARNING | pyMut.annotate.actionable_mutation | Gene does not exist for variant at index 40 in batch 2 2025-08-01 01:31:16,092 | WARNING | pyMut.annotate.actionable_mutation | Unknown oncogenicity for variant at index 40 in batch 2 2025-08-01 01:31:16,093 | WARNING | pyMut.annotate.actionable_mutation | Gene does not exist for variant at index 41 in batch 2 2025-08-01 01:31:16,093 | WARNING | pyMut.annotate.actionable_mutation | Unknown oncogenicity for variant at index 41 in batch 2 2025-08-01 01:31:16,094 | WARNING | pyMut.annotate.actionable_mutation | Gene does not exist for variant at index 42 in batch 2 2025-08-01 01:31:16,094 | WARNING | pyMut.annotate.actionable_mutation | Unknown oncogenicity for variant at index 42 in batch 2 2025-08-01 01:31:16,094 | WARNING | pyMut.annotate.actionable_mutation | Gene does not exist for variant at index 43 in batch 2 2025-08-01 01:31:16,094 | WARNING | pyMut.annotate.actionable_mutation | Unknown oncogenicity for variant at index 43 in batch 2 2025-08-01 01:31:16,095 | WARNING | pyMut.annotate.actionable_mutation | Gene does not exist for variant at index 44 in batch 2 2025-08-01 01:31:16,095 | WARNING | pyMut.annotate.actionable_mutation | Unknown oncogenicity for variant at index 44 in batch 2 2025-08-01 01:31:16,095 | WARNING | pyMut.annotate.actionable_mutation | Gene does not exist for variant at index 45 in batch 2 2025-08-01 01:31:16,096 | WARNING | pyMut.annotate.actionable_mutation | Unknown oncogenicity for variant at index 45 in batch 2 2025-08-01 01:31:16,096 | WARNING | pyMut.annotate.actionable_mutation | Gene does not exist for variant at index 46 in batch 2 2025-08-01 01:31:16,096 | WARNING | pyMut.annotate.actionable_mutation | Unknown oncogenicity for variant at index 46 in batch 2 2025-08-01 01:31:16,096 | WARNING | pyMut.annotate.actionable_mutation | Gene does not exist for variant at index 47 in batch 2 2025-08-01 01:31:16,096 | WARNING | pyMut.annotate.actionable_mutation | Unknown oncogenicity for variant at index 47 in batch 2 2025-08-01 01:31:16,097 | WARNING | pyMut.annotate.actionable_mutation | Gene does not exist for variant at index 48 in batch 2 2025-08-01 01:31:16,097 | WARNING | pyMut.annotate.actionable_mutation | Unknown oncogenicity for variant at index 48 in batch 2 2025-08-01 01:31:16,097 | WARNING | pyMut.annotate.actionable_mutation | Gene does not exist for variant at index 49 in batch 2 2025-08-01 01:31:16,098 | WARNING | pyMut.annotate.actionable_mutation | Unknown oncogenicity for variant at index 49 in batch 2 2025-08-01 01:31:16,098 | WARNING | pyMut.annotate.actionable_mutation | Gene does not exist for variant at index 50 in batch 2 2025-08-01 01:31:16,099 | WARNING | pyMut.annotate.actionable_mutation | Unknown oncogenicity for variant at index 50 in batch 2 2025-08-01 01:31:16,099 | WARNING | pyMut.annotate.actionable_mutation | Gene does not exist for variant at index 51 in batch 2 2025-08-01 01:31:16,099 | WARNING | pyMut.annotate.actionable_mutation | Unknown oncogenicity for variant at index 51 in batch 2 2025-08-01 01:31:16,100 | WARNING | pyMut.annotate.actionable_mutation | Gene does not exist for variant at index 52 in batch 2 2025-08-01 01:31:16,100 | WARNING | pyMut.annotate.actionable_mutation | Unknown oncogenicity for variant at index 52 in batch 2 2025-08-01 01:31:16,101 | WARNING | pyMut.annotate.actionable_mutation | Gene does not exist for variant at index 60 in batch 2 2025-08-01 01:31:16,101 | WARNING | pyMut.annotate.actionable_mutation | Unknown oncogenicity for variant at index 60 in batch 2 2025-08-01 01:31:16,101 | WARNING | pyMut.annotate.actionable_mutation | Gene does not exist for variant at index 61 in batch 2 2025-08-01 01:31:16,101 | WARNING | pyMut.annotate.actionable_mutation | Unknown oncogenicity for variant at index 61 in batch 2 2025-08-01 01:31:16,102 | WARNING | pyMut.annotate.actionable_mutation | Gene does not exist for variant at index 62 in batch 2 2025-08-01 01:31:16,102 | WARNING | pyMut.annotate.actionable_mutation | Unknown oncogenicity for variant at index 62 in batch 2 2025-08-01 01:31:16,102 | WARNING | pyMut.annotate.actionable_mutation | Gene does not exist for variant at index 63 in batch 2 2025-08-01 01:31:16,102 | WARNING | pyMut.annotate.actionable_mutation | Unknown oncogenicity for variant at index 63 in batch 2 2025-08-01 01:31:16,103 | WARNING | pyMut.annotate.actionable_mutation | Unknown oncogenicity for variant at index 64 in batch 2 2025-08-01 01:31:16,103 | WARNING | pyMut.annotate.actionable_mutation | Gene does not exist for variant at index 65 in batch 2 2025-08-01 01:31:16,103 | WARNING | pyMut.annotate.actionable_mutation | Unknown oncogenicity for variant at index 65 in batch 2 2025-08-01 01:31:16,103 | WARNING | pyMut.annotate.actionable_mutation | Unknown oncogenicity for variant at index 66 in batch 2 2025-08-01 01:31:16,104 | WARNING | pyMut.annotate.actionable_mutation | Gene does not exist for variant at index 67 in batch 2 2025-08-01 01:31:16,104 | WARNING | pyMut.annotate.actionable_mutation | Unknown oncogenicity for variant at index 67 in batch 2 2025-08-01 01:31:16,105 | WARNING | pyMut.annotate.actionable_mutation | Gene does not exist for variant at index 68 in batch 2 2025-08-01 01:31:16,105 | WARNING | pyMut.annotate.actionable_mutation | Unknown oncogenicity for variant at index 68 in batch 2 2025-08-01 01:31:16,105 | WARNING | pyMut.annotate.actionable_mutation | Gene does not exist for variant at index 69 in batch 2 2025-08-01 01:31:16,105 | WARNING | pyMut.annotate.actionable_mutation | Unknown oncogenicity for variant at index 69 in batch 2 2025-08-01 01:31:16,105 | WARNING | pyMut.annotate.actionable_mutation | Gene does not exist for variant at index 70 in batch 2 2025-08-01 01:31:16,106 | WARNING | pyMut.annotate.actionable_mutation | Unknown oncogenicity for variant at index 70 in batch 2 2025-08-01 01:31:16,106 | WARNING | pyMut.annotate.actionable_mutation | Gene does not exist for variant at index 71 in batch 2 2025-08-01 01:31:16,106 | WARNING | pyMut.annotate.actionable_mutation | Unknown oncogenicity for variant at index 71 in batch 2 2025-08-01 01:31:16,107 | WARNING | pyMut.annotate.actionable_mutation | Gene does not exist for variant at index 72 in batch 2 2025-08-01 01:31:16,107 | WARNING | pyMut.annotate.actionable_mutation | Unknown oncogenicity for variant at index 72 in batch 2 2025-08-01 01:31:16,107 | WARNING | pyMut.annotate.actionable_mutation | Gene does not exist for variant at index 73 in batch 2 2025-08-01 01:31:16,108 | WARNING | pyMut.annotate.actionable_mutation | Unknown oncogenicity for variant at index 73 in batch 2 2025-08-01 01:31:16,108 | WARNING | pyMut.annotate.actionable_mutation | Gene does not exist for variant at index 74 in batch 2 2025-08-01 01:31:16,108 | WARNING | pyMut.annotate.actionable_mutation | Unknown oncogenicity for variant at index 74 in batch 2 2025-08-01 01:31:16,108 | WARNING | pyMut.annotate.actionable_mutation | Gene does not exist for variant at index 75 in batch 2 2025-08-01 01:31:16,109 | WARNING | pyMut.annotate.actionable_mutation | Unknown oncogenicity for variant at index 75 in batch 2 2025-08-01 01:31:16,109 | WARNING | pyMut.annotate.actionable_mutation | Gene does not exist for variant at index 76 in batch 2 2025-08-01 01:31:16,110 | WARNING | pyMut.annotate.actionable_mutation | Unknown oncogenicity for variant at index 76 in batch 2 2025-08-01 01:31:16,110 | WARNING | pyMut.annotate.actionable_mutation | Gene does not exist for variant at index 77 in batch 2 2025-08-01 01:31:16,110 | WARNING | pyMut.annotate.actionable_mutation | Unknown oncogenicity for variant at index 77 in batch 2 2025-08-01 01:31:16,110 | WARNING | pyMut.annotate.actionable_mutation | Gene does not exist for variant at index 78 in batch 2 2025-08-01 01:31:16,111 | WARNING | pyMut.annotate.actionable_mutation | Unknown oncogenicity for variant at index 78 in batch 2 2025-08-01 01:31:16,111 | WARNING | pyMut.annotate.actionable_mutation | Gene does not exist for variant at index 79 in batch 2 2025-08-01 01:31:16,111 | WARNING | pyMut.annotate.actionable_mutation | Unknown oncogenicity for variant at index 79 in batch 2 2025-08-01 01:31:16,111 | WARNING | pyMut.annotate.actionable_mutation | Gene does not exist for variant at index 80 in batch 2 2025-08-01 01:31:16,112 | WARNING | pyMut.annotate.actionable_mutation | Unknown oncogenicity for variant at index 80 in batch 2 2025-08-01 01:31:16,112 | WARNING | pyMut.annotate.actionable_mutation | Gene does not exist for variant at index 81 in batch 2 2025-08-01 01:31:16,112 | WARNING | pyMut.annotate.actionable_mutation | Unknown oncogenicity for variant at index 81 in batch 2 2025-08-01 01:31:16,113 | WARNING | pyMut.annotate.actionable_mutation | Gene does not exist for variant at index 82 in batch 2 2025-08-01 01:31:16,113 | WARNING | pyMut.annotate.actionable_mutation | Unknown oncogenicity for variant at index 82 in batch 2 2025-08-01 01:31:16,113 | WARNING | pyMut.annotate.actionable_mutation | Gene does not exist for variant at index 83 in batch 2 2025-08-01 01:31:16,114 | WARNING | pyMut.annotate.actionable_mutation | Unknown oncogenicity for variant at index 83 in batch 2 2025-08-01 01:31:16,114 | WARNING | pyMut.annotate.actionable_mutation | Gene does not exist for variant at index 84 in batch 2 2025-08-01 01:31:16,114 | WARNING | pyMut.annotate.actionable_mutation | Unknown oncogenicity for variant at index 84 in batch 2 2025-08-01 01:31:16,115 | WARNING | pyMut.annotate.actionable_mutation | Gene does not exist for variant at index 85 in batch 2 2025-08-01 01:31:16,115 | WARNING | pyMut.annotate.actionable_mutation | Unknown oncogenicity for variant at index 85 in batch 2 2025-08-01 01:31:16,115 | WARNING | pyMut.annotate.actionable_mutation | Gene does not exist for variant at index 86 in batch 2 2025-08-01 01:31:16,116 | WARNING | pyMut.annotate.actionable_mutation | Unknown oncogenicity for variant at index 86 in batch 2 2025-08-01 01:31:16,116 | WARNING | pyMut.annotate.actionable_mutation | Gene does not exist for variant at index 87 in batch 2 2025-08-01 01:31:16,116 | WARNING | pyMut.annotate.actionable_mutation | Unknown oncogenicity for variant at index 87 in batch 2 2025-08-01 01:31:16,116 | WARNING | pyMut.annotate.actionable_mutation | Gene does not exist for variant at index 88 in batch 2 2025-08-01 01:31:16,117 | WARNING | pyMut.annotate.actionable_mutation | Unknown oncogenicity for variant at index 88 in batch 2 2025-08-01 01:31:16,117 | WARNING | pyMut.annotate.actionable_mutation | Gene does not exist for variant at index 89 in batch 2 2025-08-01 01:31:16,117 | WARNING | pyMut.annotate.actionable_mutation | Unknown oncogenicity for variant at index 89 in batch 2 2025-08-01 01:31:16,118 | WARNING | pyMut.annotate.actionable_mutation | Gene does not exist for variant at index 90 in batch 2 2025-08-01 01:31:16,118 | WARNING | pyMut.annotate.actionable_mutation | Unknown oncogenicity for variant at index 90 in batch 2 2025-08-01 01:31:16,118 | WARNING | pyMut.annotate.actionable_mutation | Gene does not exist for variant at index 91 in batch 2 2025-08-01 01:31:16,119 | WARNING | pyMut.annotate.actionable_mutation | Unknown oncogenicity for variant at index 91 in batch 2 2025-08-01 01:31:16,119 | WARNING | pyMut.annotate.actionable_mutation | Gene does not exist for variant at index 92 in batch 2 2025-08-01 01:31:16,119 | WARNING | pyMut.annotate.actionable_mutation | Unknown oncogenicity for variant at index 92 in batch 2 2025-08-01 01:31:16,119 | WARNING | pyMut.annotate.actionable_mutation | Gene does not exist for variant at index 93 in batch 2 2025-08-01 01:31:16,120 | WARNING | pyMut.annotate.actionable_mutation | Unknown oncogenicity for variant at index 93 in batch 2 2025-08-01 01:31:16,120 | WARNING | pyMut.annotate.actionable_mutation | Gene does not exist for variant at index 94 in batch 2 2025-08-01 01:31:16,120 | WARNING | pyMut.annotate.actionable_mutation | Unknown oncogenicity for variant at index 94 in batch 2 2025-08-01 01:31:16,120 | WARNING | pyMut.annotate.actionable_mutation | Gene does not exist for variant at index 95 in batch 2 2025-08-01 01:31:16,121 | WARNING | pyMut.annotate.actionable_mutation | Unknown oncogenicity for variant at index 95 in batch 2 2025-08-01 01:31:16,121 | WARNING | pyMut.annotate.actionable_mutation | Gene does not exist for variant at index 97 in batch 2 2025-08-01 01:31:16,121 | WARNING | pyMut.annotate.actionable_mutation | Unknown oncogenicity for variant at index 97 in batch 2 2025-08-01 01:31:16,121 | WARNING | pyMut.annotate.actionable_mutation | Gene does not exist for variant at index 98 in batch 2 2025-08-01 01:31:16,122 | WARNING | pyMut.annotate.actionable_mutation | Unknown oncogenicity for variant at index 98 in batch 2 2025-08-01 01:31:16,122 | WARNING | pyMut.annotate.actionable_mutation | Gene does not exist for variant at index 99 in batch 2 2025-08-01 01:31:16,124 | WARNING | pyMut.annotate.actionable_mutation | Unknown oncogenicity for variant at index 99 in batch 2 2025-08-01 01:31:16,124 | WARNING | pyMut.annotate.actionable_mutation | Gene does not exist for variant at index 100 in batch 2 2025-08-01 01:31:16,124 | WARNING | pyMut.annotate.actionable_mutation | Unknown oncogenicity for variant at index 100 in batch 2 2025-08-01 01:31:16,124 | WARNING | pyMut.annotate.actionable_mutation | Gene does not exist for variant at index 101 in batch 2 2025-08-01 01:31:16,125 | WARNING | pyMut.annotate.actionable_mutation | Unknown oncogenicity for variant at index 101 in batch 2 2025-08-01 01:31:16,125 | WARNING | pyMut.annotate.actionable_mutation | Gene does not exist for variant at index 102 in batch 2 2025-08-01 01:31:16,125 | WARNING | pyMut.annotate.actionable_mutation | Unknown oncogenicity for variant at index 102 in batch 2 2025-08-01 01:31:16,125 | WARNING | pyMut.annotate.actionable_mutation | Gene does not exist for variant at index 103 in batch 2 2025-08-01 01:31:16,126 | WARNING | pyMut.annotate.actionable_mutation | Unknown oncogenicity for variant at index 103 in batch 2 2025-08-01 01:31:16,126 | WARNING | pyMut.annotate.actionable_mutation | Gene does not exist for variant at index 104 in batch 2 2025-08-01 01:31:16,126 | WARNING | pyMut.annotate.actionable_mutation | Unknown oncogenicity for variant at index 104 in batch 2 2025-08-01 01:31:16,126 | WARNING | pyMut.annotate.actionable_mutation | Gene does not exist for variant at index 105 in batch 2 2025-08-01 01:31:16,127 | WARNING | pyMut.annotate.actionable_mutation | Unknown oncogenicity for variant at index 105 in batch 2 2025-08-01 01:31:16,127 | WARNING | pyMut.annotate.actionable_mutation | Gene does not exist for variant at index 106 in batch 2 2025-08-01 01:31:16,127 | WARNING | pyMut.annotate.actionable_mutation | Unknown oncogenicity for variant at index 106 in batch 2 2025-08-01 01:31:16,127 | WARNING | pyMut.annotate.actionable_mutation | Gene does not exist for variant at index 107 in batch 2 2025-08-01 01:31:16,128 | WARNING | pyMut.annotate.actionable_mutation | Unknown oncogenicity for variant at index 107 in batch 2 2025-08-01 01:31:16,128 | WARNING | pyMut.annotate.actionable_mutation | Gene does not exist for variant at index 108 in batch 2 2025-08-01 01:31:16,129 | WARNING | pyMut.annotate.actionable_mutation | Unknown oncogenicity for variant at index 108 in batch 2 2025-08-01 01:31:16,129 | WARNING | pyMut.annotate.actionable_mutation | Gene does not exist for variant at index 109 in batch 2 2025-08-01 01:31:16,130 | WARNING | pyMut.annotate.actionable_mutation | Unknown oncogenicity for variant at index 109 in batch 2 2025-08-01 01:31:16,130 | WARNING | pyMut.annotate.actionable_mutation | Gene does not exist for variant at index 110 in batch 2 2025-08-01 01:31:16,130 | WARNING | pyMut.annotate.actionable_mutation | Unknown oncogenicity for variant at index 110 in batch 2 2025-08-01 01:31:16,130 | WARNING | pyMut.annotate.actionable_mutation | Gene does not exist for variant at index 111 in batch 2 2025-08-01 01:31:16,130 | WARNING | pyMut.annotate.actionable_mutation | Unknown oncogenicity for variant at index 111 in batch 2 2025-08-01 01:31:16,131 | WARNING | pyMut.annotate.actionable_mutation | Gene does not exist for variant at index 112 in batch 2 2025-08-01 01:31:16,131 | WARNING | pyMut.annotate.actionable_mutation | Unknown oncogenicity for variant at index 112 in batch 2 2025-08-01 01:31:16,131 | WARNING | pyMut.annotate.actionable_mutation | Gene does not exist for variant at index 113 in batch 2 2025-08-01 01:31:16,132 | WARNING | pyMut.annotate.actionable_mutation | Unknown oncogenicity for variant at index 113 in batch 2 2025-08-01 01:31:16,132 | WARNING | pyMut.annotate.actionable_mutation | Unknown oncogenicity for variant at index 114 in batch 2 2025-08-01 01:31:16,132 | WARNING | pyMut.annotate.actionable_mutation | Unknown oncogenicity for variant at index 115 in batch 2 2025-08-01 01:31:16,133 | WARNING | pyMut.annotate.actionable_mutation | Unknown oncogenicity for variant at index 117 in batch 2 2025-08-01 01:31:16,133 | WARNING | pyMut.annotate.actionable_mutation | Unknown oncogenicity for variant at index 118 in batch 2 2025-08-01 01:31:16,134 | WARNING | pyMut.annotate.actionable_mutation | Gene does not exist for variant at index 119 in batch 2 2025-08-01 01:31:16,134 | WARNING | pyMut.annotate.actionable_mutation | Unknown oncogenicity for variant at index 119 in batch 2 2025-08-01 01:31:16,134 | WARNING | pyMut.annotate.actionable_mutation | Gene does not exist for variant at index 120 in batch 2 2025-08-01 01:31:16,135 | WARNING | pyMut.annotate.actionable_mutation | Unknown oncogenicity for variant at index 120 in batch 2 2025-08-01 01:31:16,135 | WARNING | pyMut.annotate.actionable_mutation | Gene does not exist for variant at index 121 in batch 2 2025-08-01 01:31:16,135 | WARNING | pyMut.annotate.actionable_mutation | Unknown oncogenicity for variant at index 121 in batch 2 2025-08-01 01:31:16,136 | WARNING | pyMut.annotate.actionable_mutation | Gene does not exist for variant at index 122 in batch 2 2025-08-01 01:31:16,136 | WARNING | pyMut.annotate.actionable_mutation | Unknown oncogenicity for variant at index 122 in batch 2 2025-08-01 01:31:16,136 | WARNING | pyMut.annotate.actionable_mutation | Gene does not exist for variant at index 123 in batch 2 2025-08-01 01:31:16,136 | WARNING | pyMut.annotate.actionable_mutation | Unknown oncogenicity for variant at index 123 in batch 2 2025-08-01 01:31:16,137 | WARNING | pyMut.annotate.actionable_mutation | Gene does not exist for variant at index 124 in batch 2 2025-08-01 01:31:16,137 | WARNING | pyMut.annotate.actionable_mutation | Unknown oncogenicity for variant at index 124 in batch 2 2025-08-01 01:31:16,137 | WARNING | pyMut.annotate.actionable_mutation | Gene does not exist for variant at index 125 in batch 2 2025-08-01 01:31:16,137 | WARNING | pyMut.annotate.actionable_mutation | Unknown oncogenicity for variant at index 125 in batch 2 2025-08-01 01:31:16,138 | WARNING | pyMut.annotate.actionable_mutation | Gene does not exist for variant at index 126 in batch 2 2025-08-01 01:31:16,138 | WARNING | pyMut.annotate.actionable_mutation | Unknown oncogenicity for variant at index 126 in batch 2 2025-08-01 01:31:16,139 | WARNING | pyMut.annotate.actionable_mutation | Gene does not exist for variant at index 127 in batch 2 2025-08-01 01:31:16,139 | WARNING | pyMut.annotate.actionable_mutation | Unknown oncogenicity for variant at index 127 in batch 2 2025-08-01 01:31:16,139 | WARNING | pyMut.annotate.actionable_mutation | Gene does not exist for variant at index 128 in batch 2 2025-08-01 01:31:16,140 | WARNING | pyMut.annotate.actionable_mutation | Unknown oncogenicity for variant at index 128 in batch 2 2025-08-01 01:31:16,140 | WARNING | pyMut.annotate.actionable_mutation | Gene does not exist for variant at index 129 in batch 2 2025-08-01 01:31:16,140 | WARNING | pyMut.annotate.actionable_mutation | Unknown oncogenicity for variant at index 129 in batch 2 2025-08-01 01:31:16,141 | WARNING | pyMut.annotate.actionable_mutation | Gene does not exist for variant at index 130 in batch 2 2025-08-01 01:31:16,141 | WARNING | pyMut.annotate.actionable_mutation | Unknown oncogenicity for variant at index 130 in batch 2 2025-08-01 01:31:16,141 | WARNING | pyMut.annotate.actionable_mutation | Gene does not exist for variant at index 131 in batch 2 2025-08-01 01:31:16,141 | WARNING | pyMut.annotate.actionable_mutation | Unknown oncogenicity for variant at index 131 in batch 2 2025-08-01 01:31:16,142 | WARNING | pyMut.annotate.actionable_mutation | Gene does not exist for variant at index 133 in batch 2 2025-08-01 01:31:16,142 | WARNING | pyMut.annotate.actionable_mutation | Unknown oncogenicity for variant at index 133 in batch 2 2025-08-01 01:31:16,142 | WARNING | pyMut.annotate.actionable_mutation | Gene does not exist for variant at index 134 in batch 2 2025-08-01 01:31:16,143 | WARNING | pyMut.annotate.actionable_mutation | Unknown oncogenicity for variant at index 134 in batch 2 2025-08-01 01:31:16,144 | WARNING | pyMut.annotate.actionable_mutation | Gene does not exist for variant at index 135 in batch 2 2025-08-01 01:31:16,144 | WARNING | pyMut.annotate.actionable_mutation | Unknown oncogenicity for variant at index 135 in batch 2 2025-08-01 01:31:16,145 | WARNING | pyMut.annotate.actionable_mutation | Gene does not exist for variant at index 136 in batch 2 2025-08-01 01:31:16,145 | WARNING | pyMut.annotate.actionable_mutation | Unknown oncogenicity for variant at index 136 in batch 2 2025-08-01 01:31:16,145 | WARNING | pyMut.annotate.actionable_mutation | Gene does not exist for variant at index 137 in batch 2 2025-08-01 01:31:16,145 | WARNING | pyMut.annotate.actionable_mutation | Unknown oncogenicity for variant at index 137 in batch 2 2025-08-01 01:31:16,146 | WARNING | pyMut.annotate.actionable_mutation | Gene does not exist for variant at index 138 in batch 2 2025-08-01 01:31:16,146 | WARNING | pyMut.annotate.actionable_mutation | Unknown oncogenicity for variant at index 138 in batch 2 2025-08-01 01:31:16,146 | WARNING | pyMut.annotate.actionable_mutation | Gene does not exist for variant at index 139 in batch 2 2025-08-01 01:31:16,147 | WARNING | pyMut.annotate.actionable_mutation | Unknown oncogenicity for variant at index 139 in batch 2 2025-08-01 01:31:16,147 | WARNING | pyMut.annotate.actionable_mutation | Gene does not exist for variant at index 140 in batch 2 2025-08-01 01:31:16,148 | WARNING | pyMut.annotate.actionable_mutation | Unknown oncogenicity for variant at index 140 in batch 2 2025-08-01 01:31:16,148 | WARNING | pyMut.annotate.actionable_mutation | Gene does not exist for variant at index 141 in batch 2 2025-08-01 01:31:16,148 | WARNING | pyMut.annotate.actionable_mutation | Unknown oncogenicity for variant at index 141 in batch 2 2025-08-01 01:31:16,149 | WARNING | pyMut.annotate.actionable_mutation | Gene does not exist for variant at index 142 in batch 2 2025-08-01 01:31:16,149 | WARNING | pyMut.annotate.actionable_mutation | Unknown oncogenicity for variant at index 142 in batch 2 2025-08-01 01:31:16,149 | WARNING | pyMut.annotate.actionable_mutation | Gene does not exist for variant at index 143 in batch 2 2025-08-01 01:31:16,149 | WARNING | pyMut.annotate.actionable_mutation | Unknown oncogenicity for variant at index 143 in batch 2 2025-08-01 01:31:16,150 | WARNING | pyMut.annotate.actionable_mutation | Gene does not exist for variant at index 144 in batch 2 2025-08-01 01:31:16,150 | WARNING | pyMut.annotate.actionable_mutation | Unknown oncogenicity for variant at index 144 in batch 2 2025-08-01 01:31:16,150 | WARNING | pyMut.annotate.actionable_mutation | Gene does not exist for variant at index 145 in batch 2 2025-08-01 01:31:16,151 | WARNING | pyMut.annotate.actionable_mutation | Unknown oncogenicity for variant at index 145 in batch 2 2025-08-01 01:31:16,152 | WARNING | pyMut.annotate.actionable_mutation | Gene does not exist for variant at index 146 in batch 2 2025-08-01 01:31:16,152 | WARNING | pyMut.annotate.actionable_mutation | Unknown oncogenicity for variant at index 146 in batch 2 2025-08-01 01:31:16,152 | WARNING | pyMut.annotate.actionable_mutation | Gene does not exist for variant at index 147 in batch 2 2025-08-01 01:31:16,152 | WARNING | pyMut.annotate.actionable_mutation | Unknown oncogenicity for variant at index 147 in batch 2 2025-08-01 01:31:16,153 | WARNING | pyMut.annotate.actionable_mutation | Gene does not exist for variant at index 148 in batch 2 2025-08-01 01:31:16,153 | WARNING | pyMut.annotate.actionable_mutation | Unknown oncogenicity for variant at index 148 in batch 2 2025-08-01 01:31:16,153 | WARNING | pyMut.annotate.actionable_mutation | Gene does not exist for variant at index 149 in batch 2 2025-08-01 01:31:16,154 | WARNING | pyMut.annotate.actionable_mutation | Unknown oncogenicity for variant at index 149 in batch 2 2025-08-01 01:31:16,154 | WARNING | pyMut.annotate.actionable_mutation | Gene does not exist for variant at index 150 in batch 2 2025-08-01 01:31:16,154 | WARNING | pyMut.annotate.actionable_mutation | Unknown oncogenicity for variant at index 150 in batch 2 2025-08-01 01:31:16,154 | WARNING | pyMut.annotate.actionable_mutation | Gene does not exist for variant at index 151 in batch 2 2025-08-01 01:31:16,154 | WARNING | pyMut.annotate.actionable_mutation | Unknown oncogenicity for variant at index 151 in batch 2 2025-08-01 01:31:16,155 | WARNING | pyMut.annotate.actionable_mutation | Gene does not exist for variant at index 152 in batch 2 2025-08-01 01:31:16,155 | WARNING | pyMut.annotate.actionable_mutation | Unknown oncogenicity for variant at index 152 in batch 2 2025-08-01 01:31:16,155 | WARNING | pyMut.annotate.actionable_mutation | Gene does not exist for variant at index 153 in batch 2 2025-08-01 01:31:16,155 | WARNING | pyMut.annotate.actionable_mutation | Unknown oncogenicity for variant at index 153 in batch 2 2025-08-01 01:31:16,156 | WARNING | pyMut.annotate.actionable_mutation | Gene does not exist for variant at index 154 in batch 2 2025-08-01 01:31:16,156 | WARNING | pyMut.annotate.actionable_mutation | Unknown oncogenicity for variant at index 154 in batch 2 2025-08-01 01:31:16,156 | WARNING | pyMut.annotate.actionable_mutation | Gene does not exist for variant at index 155 in batch 2 2025-08-01 01:31:16,157 | WARNING | pyMut.annotate.actionable_mutation | Unknown oncogenicity for variant at index 155 in batch 2 2025-08-01 01:31:16,157 | WARNING | pyMut.annotate.actionable_mutation | Gene does not exist for variant at index 156 in batch 2 2025-08-01 01:31:16,157 | WARNING | pyMut.annotate.actionable_mutation | Unknown oncogenicity for variant at index 156 in batch 2 2025-08-01 01:31:16,158 | WARNING | pyMut.annotate.actionable_mutation | Gene does not exist for variant at index 157 in batch 2 2025-08-01 01:31:16,158 | WARNING | pyMut.annotate.actionable_mutation | Unknown oncogenicity for variant at index 157 in batch 2 2025-08-01 01:31:16,158 | WARNING | pyMut.annotate.actionable_mutation | Gene does not exist for variant at index 158 in batch 2 2025-08-01 01:31:16,158 | WARNING | pyMut.annotate.actionable_mutation | Unknown oncogenicity for variant at index 158 in batch 2 2025-08-01 01:31:16,159 | WARNING | pyMut.annotate.actionable_mutation | Gene does not exist for variant at index 159 in batch 2 2025-08-01 01:31:16,159 | WARNING | pyMut.annotate.actionable_mutation | Unknown oncogenicity for variant at index 159 in batch 2 2025-08-01 01:31:16,159 | WARNING | pyMut.annotate.actionable_mutation | Gene does not exist for variant at index 160 in batch 2 2025-08-01 01:31:16,159 | WARNING | pyMut.annotate.actionable_mutation | Unknown oncogenicity for variant at index 160 in batch 2 2025-08-01 01:31:16,160 | WARNING | pyMut.annotate.actionable_mutation | Gene does not exist for variant at index 161 in batch 2 2025-08-01 01:31:16,161 | WARNING | pyMut.annotate.actionable_mutation | Unknown oncogenicity for variant at index 161 in batch 2 2025-08-01 01:31:16,161 | WARNING | pyMut.annotate.actionable_mutation | Gene does not exist for variant at index 162 in batch 2 2025-08-01 01:31:16,161 | WARNING | pyMut.annotate.actionable_mutation | Unknown oncogenicity for variant at index 162 in batch 2 2025-08-01 01:31:16,161 | WARNING | pyMut.annotate.actionable_mutation | Gene does not exist for variant at index 163 in batch 2 2025-08-01 01:31:16,162 | WARNING | pyMut.annotate.actionable_mutation | Unknown oncogenicity for variant at index 163 in batch 2 2025-08-01 01:31:16,162 | WARNING | pyMut.annotate.actionable_mutation | Gene does not exist for variant at index 164 in batch 2 2025-08-01 01:31:16,163 | WARNING | pyMut.annotate.actionable_mutation | Unknown oncogenicity for variant at index 164 in batch 2 2025-08-01 01:31:16,163 | WARNING | pyMut.annotate.actionable_mutation | Gene does not exist for variant at index 165 in batch 2 2025-08-01 01:31:16,163 | WARNING | pyMut.annotate.actionable_mutation | Unknown oncogenicity for variant at index 165 in batch 2 2025-08-01 01:31:16,163 | WARNING | pyMut.annotate.actionable_mutation | Gene does not exist for variant at index 166 in batch 2 2025-08-01 01:31:16,164 | WARNING | pyMut.annotate.actionable_mutation | Unknown oncogenicity for variant at index 166 in batch 2 2025-08-01 01:31:16,164 | WARNING | pyMut.annotate.actionable_mutation | Gene does not exist for variant at index 167 in batch 2 2025-08-01 01:31:16,164 | WARNING | pyMut.annotate.actionable_mutation | Unknown oncogenicity for variant at index 167 in batch 2 2025-08-01 01:31:16,165 | WARNING | pyMut.annotate.actionable_mutation | Gene does not exist for variant at index 168 in batch 2 2025-08-01 01:31:16,165 | WARNING | pyMut.annotate.actionable_mutation | Unknown oncogenicity for variant at index 168 in batch 2 2025-08-01 01:31:16,165 | WARNING | pyMut.annotate.actionable_mutation | Gene does not exist for variant at index 169 in batch 2 2025-08-01 01:31:16,166 | WARNING | pyMut.annotate.actionable_mutation | Unknown oncogenicity for variant at index 169 in batch 2 2025-08-01 01:31:16,166 | WARNING | pyMut.annotate.actionable_mutation | Gene does not exist for variant at index 170 in batch 2 2025-08-01 01:31:16,166 | WARNING | pyMut.annotate.actionable_mutation | Unknown oncogenicity for variant at index 170 in batch 2 2025-08-01 01:31:16,167 | WARNING | pyMut.annotate.actionable_mutation | Gene does not exist for variant at index 171 in batch 2 2025-08-01 01:31:16,167 | WARNING | pyMut.annotate.actionable_mutation | Unknown oncogenicity for variant at index 171 in batch 2 2025-08-01 01:31:16,168 | WARNING | pyMut.annotate.actionable_mutation | Gene does not exist for variant at index 172 in batch 2 2025-08-01 01:31:16,168 | WARNING | pyMut.annotate.actionable_mutation | Unknown oncogenicity for variant at index 172 in batch 2 2025-08-01 01:31:16,168 | WARNING | pyMut.annotate.actionable_mutation | Gene does not exist for variant at index 173 in batch 2 2025-08-01 01:31:16,168 | WARNING | pyMut.annotate.actionable_mutation | Unknown oncogenicity for variant at index 173 in batch 2 2025-08-01 01:31:16,168 | WARNING | pyMut.annotate.actionable_mutation | Gene does not exist for variant at index 174 in batch 2 2025-08-01 01:31:16,169 | WARNING | pyMut.annotate.actionable_mutation | Unknown oncogenicity for variant at index 174 in batch 2 2025-08-01 01:31:16,170 | WARNING | pyMut.annotate.actionable_mutation | Gene does not exist for variant at index 175 in batch 2 2025-08-01 01:31:16,170 | WARNING | pyMut.annotate.actionable_mutation | Unknown oncogenicity for variant at index 175 in batch 2 2025-08-01 01:31:16,170 | WARNING | pyMut.annotate.actionable_mutation | Unknown oncogenicity for variant at index 176 in batch 2 2025-08-01 01:31:16,170 | WARNING | pyMut.annotate.actionable_mutation | Gene does not exist for variant at index 177 in batch 2 2025-08-01 01:31:16,171 | WARNING | pyMut.annotate.actionable_mutation | Unknown oncogenicity for variant at index 177 in batch 2 2025-08-01 01:31:16,172 | WARNING | pyMut.annotate.actionable_mutation | Gene does not exist for variant at index 178 in batch 2 2025-08-01 01:31:16,172 | WARNING | pyMut.annotate.actionable_mutation | Unknown oncogenicity for variant at index 178 in batch 2 2025-08-01 01:31:16,172 | WARNING | pyMut.annotate.actionable_mutation | Gene does not exist for variant at index 179 in batch 2 2025-08-01 01:31:16,173 | WARNING | pyMut.annotate.actionable_mutation | Unknown oncogenicity for variant at index 179 in batch 2 2025-08-01 01:31:16,173 | WARNING | pyMut.annotate.actionable_mutation | Unknown oncogenicity for variant at index 180 in batch 2 2025-08-01 01:31:16,173 | WARNING | pyMut.annotate.actionable_mutation | Gene does not exist for variant at index 181 in batch 2 2025-08-01 01:31:16,173 | WARNING | pyMut.annotate.actionable_mutation | Unknown oncogenicity for variant at index 181 in batch 2 2025-08-01 01:31:16,173 | WARNING | pyMut.annotate.actionable_mutation | Gene does not exist for variant at index 182 in batch 2 2025-08-01 01:31:16,174 | WARNING | pyMut.annotate.actionable_mutation | Unknown oncogenicity for variant at index 182 in batch 2 2025-08-01 01:31:16,174 | WARNING | pyMut.annotate.actionable_mutation | Unknown oncogenicity for variant at index 183 in batch 2 2025-08-01 01:31:16,174 | WARNING | pyMut.annotate.actionable_mutation | Gene does not exist for variant at index 184 in batch 2 2025-08-01 01:31:16,175 | WARNING | pyMut.annotate.actionable_mutation | Unknown oncogenicity for variant at index 184 in batch 2 2025-08-01 01:31:16,175 | WARNING | pyMut.annotate.actionable_mutation | Gene does not exist for variant at index 185 in batch 2 2025-08-01 01:31:16,175 | WARNING | pyMut.annotate.actionable_mutation | Unknown oncogenicity for variant at index 185 in batch 2 2025-08-01 01:31:16,175 | WARNING | pyMut.annotate.actionable_mutation | Gene does not exist for variant at index 186 in batch 2 2025-08-01 01:31:16,176 | WARNING | pyMut.annotate.actionable_mutation | Unknown oncogenicity for variant at index 186 in batch 2 2025-08-01 01:31:16,176 | WARNING | pyMut.annotate.actionable_mutation | Unknown oncogenicity for variant at index 187 in batch 2 2025-08-01 01:31:16,177 | WARNING | pyMut.annotate.actionable_mutation | Gene does not exist for variant at index 188 in batch 2 2025-08-01 01:31:16,177 | WARNING | pyMut.annotate.actionable_mutation | Unknown oncogenicity for variant at index 188 in batch 2 2025-08-01 01:31:16,177 | WARNING | pyMut.annotate.actionable_mutation | Gene does not exist for variant at index 189 in batch 2 2025-08-01 01:31:16,178 | WARNING | pyMut.annotate.actionable_mutation | Unknown oncogenicity for variant at index 189 in batch 2 2025-08-01 01:31:16,178 | WARNING | pyMut.annotate.actionable_mutation | Gene does not exist for variant at index 190 in batch 2 2025-08-01 01:31:16,178 | WARNING | pyMut.annotate.actionable_mutation | Unknown oncogenicity for variant at index 190 in batch 2 2025-08-01 01:31:16,178 | WARNING | pyMut.annotate.actionable_mutation | Gene does not exist for variant at index 191 in batch 2 2025-08-01 01:31:16,179 | WARNING | pyMut.annotate.actionable_mutation | Unknown oncogenicity for variant at index 191 in batch 2 2025-08-01 01:31:16,179 | WARNING | pyMut.annotate.actionable_mutation | Gene does not exist for variant at index 192 in batch 2 2025-08-01 01:31:16,179 | WARNING | pyMut.annotate.actionable_mutation | Unknown oncogenicity for variant at index 192 in batch 2 2025-08-01 01:31:16,179 | WARNING | pyMut.annotate.actionable_mutation | Gene does not exist for variant at index 193 in batch 2 2025-08-01 01:31:16,180 | WARNING | pyMut.annotate.actionable_mutation | Unknown oncogenicity for variant at index 193 in batch 2 2025-08-01 01:31:16,180 | WARNING | pyMut.annotate.actionable_mutation | Gene does not exist for variant at index 194 in batch 2 2025-08-01 01:31:16,180 | WARNING | pyMut.annotate.actionable_mutation | Unknown oncogenicity for variant at index 194 in batch 2 2025-08-01 01:31:16,181 | WARNING | pyMut.annotate.actionable_mutation | Gene does not exist for variant at index 195 in batch 2 2025-08-01 01:31:16,181 | WARNING | pyMut.annotate.actionable_mutation | Unknown oncogenicity for variant at index 195 in batch 2 2025-08-01 01:31:16,181 | WARNING | pyMut.annotate.actionable_mutation | Gene does not exist for variant at index 196 in batch 2 2025-08-01 01:31:16,181 | WARNING | pyMut.annotate.actionable_mutation | Unknown oncogenicity for variant at index 196 in batch 2 2025-08-01 01:31:16,182 | WARNING | pyMut.annotate.actionable_mutation | Gene does not exist for variant at index 197 in batch 2 2025-08-01 01:31:16,182 | WARNING | pyMut.annotate.actionable_mutation | Unknown oncogenicity for variant at index 197 in batch 2 2025-08-01 01:31:16,182 | WARNING | pyMut.annotate.actionable_mutation | Gene does not exist for variant at index 198 in batch 2 2025-08-01 01:31:16,182 | WARNING | pyMut.annotate.actionable_mutation | Unknown oncogenicity for variant at index 198 in batch 2 2025-08-01 01:31:16,183 | WARNING | pyMut.annotate.actionable_mutation | Gene does not exist for variant at index 199 in batch 2 2025-08-01 01:31:16,183 | WARNING | pyMut.annotate.actionable_mutation | Unknown oncogenicity for variant at index 199 in batch 2 2025-08-01 01:31:16,183 | WARNING | pyMut.annotate.actionable_mutation | Gene does not exist for variant at index 200 in batch 2 2025-08-01 01:31:16,184 | WARNING | pyMut.annotate.actionable_mutation | Unknown oncogenicity for variant at index 200 in batch 2 2025-08-01 01:31:16,184 | WARNING | pyMut.annotate.actionable_mutation | Unknown oncogenicity for variant at index 201 in batch 2 2025-08-01 01:31:16,184 | WARNING | pyMut.annotate.actionable_mutation | Gene does not exist for variant at index 202 in batch 2 2025-08-01 01:31:16,184 | WARNING | pyMut.annotate.actionable_mutation | Unknown oncogenicity for variant at index 202 in batch 2 2025-08-01 01:31:16,185 | WARNING | pyMut.annotate.actionable_mutation | Gene does not exist for variant at index 203 in batch 2 2025-08-01 01:31:16,185 | WARNING | pyMut.annotate.actionable_mutation | Unknown oncogenicity for variant at index 203 in batch 2 2025-08-01 01:31:16,186 | WARNING | pyMut.annotate.actionable_mutation | Gene does not exist for variant at index 204 in batch 2 2025-08-01 01:31:16,186 | WARNING | pyMut.annotate.actionable_mutation | Unknown oncogenicity for variant at index 204 in batch 2 2025-08-01 01:31:16,186 | WARNING | pyMut.annotate.actionable_mutation | Gene does not exist for variant at index 205 in batch 2 2025-08-01 01:31:16,186 | WARNING | pyMut.annotate.actionable_mutation | Unknown oncogenicity for variant at index 205 in batch 2 2025-08-01 01:31:16,187 | WARNING | pyMut.annotate.actionable_mutation | Gene does not exist for variant at index 206 in batch 2 2025-08-01 01:31:16,188 | WARNING | pyMut.annotate.actionable_mutation | Unknown oncogenicity for variant at index 206 in batch 2 2025-08-01 01:31:16,188 | WARNING | pyMut.annotate.actionable_mutation | Gene does not exist for variant at index 207 in batch 2 2025-08-01 01:31:16,188 | WARNING | pyMut.annotate.actionable_mutation | Unknown oncogenicity for variant at index 207 in batch 2 2025-08-01 01:31:16,189 | WARNING | pyMut.annotate.actionable_mutation | Gene does not exist for variant at index 208 in batch 2 2025-08-01 01:31:16,189 | WARNING | pyMut.annotate.actionable_mutation | Unknown oncogenicity for variant at index 208 in batch 2 2025-08-01 01:31:16,189 | WARNING | pyMut.annotate.actionable_mutation | Gene does not exist for variant at index 209 in batch 2 2025-08-01 01:31:16,190 | WARNING | pyMut.annotate.actionable_mutation | Unknown oncogenicity for variant at index 209 in batch 2 2025-08-01 01:31:16,190 | WARNING | pyMut.annotate.actionable_mutation | Gene does not exist for variant at index 210 in batch 2 2025-08-01 01:31:16,190 | WARNING | pyMut.annotate.actionable_mutation | Unknown oncogenicity for variant at index 210 in batch 2 2025-08-01 01:31:16,191 | WARNING | pyMut.annotate.actionable_mutation | Gene does not exist for variant at index 211 in batch 2 2025-08-01 01:31:16,191 | WARNING | pyMut.annotate.actionable_mutation | Unknown oncogenicity for variant at index 211 in batch 2 2025-08-01 01:31:16,191 | WARNING | pyMut.annotate.actionable_mutation | Gene does not exist for variant at index 212 in batch 2 2025-08-01 01:31:16,192 | WARNING | pyMut.annotate.actionable_mutation | Unknown oncogenicity for variant at index 212 in batch 2 2025-08-01 01:31:16,192 | WARNING | pyMut.annotate.actionable_mutation | Gene does not exist for variant at index 214 in batch 2 2025-08-01 01:31:16,192 | WARNING | pyMut.annotate.actionable_mutation | Unknown oncogenicity for variant at index 214 in batch 2 2025-08-01 01:31:16,193 | WARNING | pyMut.annotate.actionable_mutation | Gene does not exist for variant at index 215 in batch 2 2025-08-01 01:31:16,193 | WARNING | pyMut.annotate.actionable_mutation | Unknown oncogenicity for variant at index 215 in batch 2 2025-08-01 01:31:16,193 | WARNING | pyMut.annotate.actionable_mutation | Gene does not exist for variant at index 216 in batch 2 2025-08-01 01:31:16,194 | WARNING | pyMut.annotate.actionable_mutation | Unknown oncogenicity for variant at index 216 in batch 2 2025-08-01 01:31:16,194 | WARNING | pyMut.annotate.actionable_mutation | Gene does not exist for variant at index 217 in batch 2 2025-08-01 01:31:16,194 | WARNING | pyMut.annotate.actionable_mutation | Unknown oncogenicity for variant at index 217 in batch 2 2025-08-01 01:31:16,195 | WARNING | pyMut.annotate.actionable_mutation | Unknown oncogenicity for variant at index 218 in batch 2 2025-08-01 01:31:16,195 | WARNING | pyMut.annotate.actionable_mutation | Gene does not exist for variant at index 219 in batch 2 2025-08-01 01:31:16,195 | WARNING | pyMut.annotate.actionable_mutation | Unknown oncogenicity for variant at index 219 in batch 2 2025-08-01 01:31:16,195 | WARNING | pyMut.annotate.actionable_mutation | Gene does not exist for variant at index 220 in batch 2 2025-08-01 01:31:16,196 | WARNING | pyMut.annotate.actionable_mutation | Unknown oncogenicity for variant at index 220 in batch 2 2025-08-01 01:31:16,196 | WARNING | pyMut.annotate.actionable_mutation | Gene does not exist for variant at index 221 in batch 2 2025-08-01 01:31:16,196 | WARNING | pyMut.annotate.actionable_mutation | Unknown oncogenicity for variant at index 221 in batch 2 2025-08-01 01:31:16,197 | WARNING | pyMut.annotate.actionable_mutation | Unknown oncogenicity for variant at index 222 in batch 2 2025-08-01 01:31:16,197 | WARNING | pyMut.annotate.actionable_mutation | Gene does not exist for variant at index 223 in batch 2 2025-08-01 01:31:16,197 | WARNING | pyMut.annotate.actionable_mutation | Unknown oncogenicity for variant at index 223 in batch 2 2025-08-01 01:31:16,198 | WARNING | pyMut.annotate.actionable_mutation | Gene does not exist for variant at index 224 in batch 2 2025-08-01 01:31:16,198 | WARNING | pyMut.annotate.actionable_mutation | Unknown oncogenicity for variant at index 224 in batch 2 2025-08-01 01:31:16,198 | WARNING | pyMut.annotate.actionable_mutation | Gene does not exist for variant at index 225 in batch 2 2025-08-01 01:31:16,198 | WARNING | pyMut.annotate.actionable_mutation | Unknown oncogenicity for variant at index 225 in batch 2 2025-08-01 01:31:16,199 | WARNING | pyMut.annotate.actionable_mutation | Gene does not exist for variant at index 226 in batch 2 2025-08-01 01:31:16,199 | WARNING | pyMut.annotate.actionable_mutation | Unknown oncogenicity for variant at index 226 in batch 2 2025-08-01 01:31:16,199 | WARNING | pyMut.annotate.actionable_mutation | Gene does not exist for variant at index 227 in batch 2 2025-08-01 01:31:16,199 | WARNING | pyMut.annotate.actionable_mutation | Unknown oncogenicity for variant at index 227 in batch 2 2025-08-01 01:31:16,199 | WARNING | pyMut.annotate.actionable_mutation | Gene does not exist for variant at index 228 in batch 2 2025-08-01 01:31:16,200 | WARNING | pyMut.annotate.actionable_mutation | Unknown oncogenicity for variant at index 228 in batch 2 2025-08-01 01:31:16,200 | WARNING | pyMut.annotate.actionable_mutation | Gene does not exist for variant at index 229 in batch 2 2025-08-01 01:31:16,200 | WARNING | pyMut.annotate.actionable_mutation | Unknown oncogenicity for variant at index 229 in batch 2 2025-08-01 01:31:16,200 | WARNING | pyMut.annotate.actionable_mutation | Gene does not exist for variant at index 230 in batch 2 2025-08-01 01:31:16,201 | WARNING | pyMut.annotate.actionable_mutation | Unknown oncogenicity for variant at index 230 in batch 2 2025-08-01 01:31:16,201 | WARNING | pyMut.annotate.actionable_mutation | Gene does not exist for variant at index 231 in batch 2 2025-08-01 01:31:16,201 | WARNING | pyMut.annotate.actionable_mutation | Unknown oncogenicity for variant at index 231 in batch 2 2025-08-01 01:31:16,201 | WARNING | pyMut.annotate.actionable_mutation | Gene does not exist for variant at index 232 in batch 2 2025-08-01 01:31:16,201 | WARNING | pyMut.annotate.actionable_mutation | Unknown oncogenicity for variant at index 232 in batch 2 2025-08-01 01:31:16,202 | WARNING | pyMut.annotate.actionable_mutation | Gene does not exist for variant at index 233 in batch 2 2025-08-01 01:31:16,202 | WARNING | pyMut.annotate.actionable_mutation | Unknown oncogenicity for variant at index 233 in batch 2 2025-08-01 01:31:16,202 | WARNING | pyMut.annotate.actionable_mutation | Gene does not exist for variant at index 234 in batch 2 2025-08-01 01:31:16,202 | WARNING | pyMut.annotate.actionable_mutation | Unknown oncogenicity for variant at index 234 in batch 2 2025-08-01 01:31:16,203 | WARNING | pyMut.annotate.actionable_mutation | Unknown oncogenicity for variant at index 235 in batch 2 2025-08-01 01:31:16,203 | WARNING | pyMut.annotate.actionable_mutation | Gene does not exist for variant at index 236 in batch 2 2025-08-01 01:31:16,203 | WARNING | pyMut.annotate.actionable_mutation | Unknown oncogenicity for variant at index 236 in batch 2 2025-08-01 01:31:16,204 | WARNING | pyMut.annotate.actionable_mutation | Gene does not exist for variant at index 237 in batch 2 2025-08-01 01:31:16,206 | WARNING | pyMut.annotate.actionable_mutation | Unknown oncogenicity for variant at index 237 in batch 2 2025-08-01 01:31:16,206 | WARNING | pyMut.annotate.actionable_mutation | Gene does not exist for variant at index 238 in batch 2 2025-08-01 01:31:16,207 | WARNING | pyMut.annotate.actionable_mutation | Unknown oncogenicity for variant at index 238 in batch 2 2025-08-01 01:31:16,207 | WARNING | pyMut.annotate.actionable_mutation | Gene does not exist for variant at index 239 in batch 2 2025-08-01 01:31:16,207 | WARNING | pyMut.annotate.actionable_mutation | Unknown oncogenicity for variant at index 239 in batch 2 2025-08-01 01:31:16,207 | WARNING | pyMut.annotate.actionable_mutation | Gene does not exist for variant at index 240 in batch 2 2025-08-01 01:31:16,208 | WARNING | pyMut.annotate.actionable_mutation | Unknown oncogenicity for variant at index 240 in batch 2 2025-08-01 01:31:16,208 | WARNING | pyMut.annotate.actionable_mutation | Gene does not exist for variant at index 241 in batch 2 2025-08-01 01:31:16,209 | WARNING | pyMut.annotate.actionable_mutation | Unknown oncogenicity for variant at index 241 in batch 2 2025-08-01 01:31:16,209 | WARNING | pyMut.annotate.actionable_mutation | Gene does not exist for variant at index 242 in batch 2 2025-08-01 01:31:16,209 | WARNING | pyMut.annotate.actionable_mutation | Unknown oncogenicity for variant at index 242 in batch 2 2025-08-01 01:31:16,210 | WARNING | pyMut.annotate.actionable_mutation | Gene does not exist for variant at index 243 in batch 2 2025-08-01 01:31:16,210 | WARNING | pyMut.annotate.actionable_mutation | Unknown oncogenicity for variant at index 243 in batch 2 2025-08-01 01:31:16,211 | WARNING | pyMut.annotate.actionable_mutation | Unknown oncogenicity for variant at index 244 in batch 2 2025-08-01 01:31:16,212 | WARNING | pyMut.annotate.actionable_mutation | Gene does not exist for variant at index 245 in batch 2 2025-08-01 01:31:16,212 | WARNING | pyMut.annotate.actionable_mutation | Unknown oncogenicity for variant at index 245 in batch 2 2025-08-01 01:31:16,212 | WARNING | pyMut.annotate.actionable_mutation | Gene does not exist for variant at index 246 in batch 2 2025-08-01 01:31:16,213 | WARNING | pyMut.annotate.actionable_mutation | Unknown oncogenicity for variant at index 246 in batch 2 2025-08-01 01:31:16,213 | WARNING | pyMut.annotate.actionable_mutation | Gene does not exist for variant at index 247 in batch 2 2025-08-01 01:31:16,213 | WARNING | pyMut.annotate.actionable_mutation | Unknown oncogenicity for variant at index 247 in batch 2 2025-08-01 01:31:16,213 | WARNING | pyMut.annotate.actionable_mutation | Gene does not exist for variant at index 248 in batch 2 2025-08-01 01:31:16,214 | WARNING | pyMut.annotate.actionable_mutation | Unknown oncogenicity for variant at index 248 in batch 2 2025-08-01 01:31:16,214 | WARNING | pyMut.annotate.actionable_mutation | Gene does not exist for variant at index 249 in batch 2 2025-08-01 01:31:16,214 | WARNING | pyMut.annotate.actionable_mutation | Unknown oncogenicity for variant at index 249 in batch 2 2025-08-01 01:31:16,214 | WARNING | pyMut.annotate.actionable_mutation | Gene does not exist for variant at index 250 in batch 2 2025-08-01 01:31:16,214 | WARNING | pyMut.annotate.actionable_mutation | Unknown oncogenicity for variant at index 250 in batch 2 2025-08-01 01:31:16,215 | WARNING | pyMut.annotate.actionable_mutation | Gene does not exist for variant at index 251 in batch 2 2025-08-01 01:31:16,215 | WARNING | pyMut.annotate.actionable_mutation | Unknown oncogenicity for variant at index 251 in batch 2 2025-08-01 01:31:16,215 | WARNING | pyMut.annotate.actionable_mutation | Gene does not exist for variant at index 252 in batch 2 2025-08-01 01:31:16,215 | WARNING | pyMut.annotate.actionable_mutation | Unknown oncogenicity for variant at index 252 in batch 2 2025-08-01 01:31:16,216 | WARNING | pyMut.annotate.actionable_mutation | Gene does not exist for variant at index 253 in batch 2 2025-08-01 01:31:16,216 | WARNING | pyMut.annotate.actionable_mutation | Unknown oncogenicity for variant at index 253 in batch 2 2025-08-01 01:31:16,217 | WARNING | pyMut.annotate.actionable_mutation | Gene does not exist for variant at index 254 in batch 2 2025-08-01 01:31:16,217 | WARNING | pyMut.annotate.actionable_mutation | Unknown oncogenicity for variant at index 254 in batch 2 2025-08-01 01:31:16,217 | WARNING | pyMut.annotate.actionable_mutation | Gene does not exist for variant at index 255 in batch 2 2025-08-01 01:31:16,218 | WARNING | pyMut.annotate.actionable_mutation | Unknown oncogenicity for variant at index 255 in batch 2 2025-08-01 01:31:16,218 | WARNING | pyMut.annotate.actionable_mutation | Gene does not exist for variant at index 256 in batch 2 2025-08-01 01:31:16,218 | WARNING | pyMut.annotate.actionable_mutation | Unknown oncogenicity for variant at index 256 in batch 2 2025-08-01 01:31:16,219 | WARNING | pyMut.annotate.actionable_mutation | Gene does not exist for variant at index 257 in batch 2 2025-08-01 01:31:16,219 | WARNING | pyMut.annotate.actionable_mutation | Unknown oncogenicity for variant at index 257 in batch 2 2025-08-01 01:31:16,219 | WARNING | pyMut.annotate.actionable_mutation | Gene does not exist for variant at index 258 in batch 2 2025-08-01 01:31:16,219 | WARNING | pyMut.annotate.actionable_mutation | Unknown oncogenicity for variant at index 258 in batch 2 2025-08-01 01:31:16,220 | WARNING | pyMut.annotate.actionable_mutation | Gene does not exist for variant at index 259 in batch 2 2025-08-01 01:31:16,220 | WARNING | pyMut.annotate.actionable_mutation | Unknown oncogenicity for variant at index 259 in batch 2 2025-08-01 01:31:16,220 | WARNING | pyMut.annotate.actionable_mutation | Gene does not exist for variant at index 260 in batch 2 2025-08-01 01:31:16,221 | WARNING | pyMut.annotate.actionable_mutation | Unknown oncogenicity for variant at index 260 in batch 2 2025-08-01 01:31:16,221 | WARNING | pyMut.annotate.actionable_mutation | Gene does not exist for variant at index 261 in batch 2 2025-08-01 01:31:16,221 | WARNING | pyMut.annotate.actionable_mutation | Unknown oncogenicity for variant at index 261 in batch 2 2025-08-01 01:31:16,221 | WARNING | pyMut.annotate.actionable_mutation | Gene does not exist for variant at index 262 in batch 2 2025-08-01 01:31:16,222 | WARNING | pyMut.annotate.actionable_mutation | Unknown oncogenicity for variant at index 262 in batch 2 2025-08-01 01:31:16,222 | WARNING | pyMut.annotate.actionable_mutation | Gene does not exist for variant at index 264 in batch 2 2025-08-01 01:31:16,222 | WARNING | pyMut.annotate.actionable_mutation | Unknown oncogenicity for variant at index 264 in batch 2 2025-08-01 01:31:16,222 | WARNING | pyMut.annotate.actionable_mutation | Gene does not exist for variant at index 265 in batch 2 2025-08-01 01:31:16,222 | WARNING | pyMut.annotate.actionable_mutation | Unknown oncogenicity for variant at index 265 in batch 2 2025-08-01 01:31:16,223 | WARNING | pyMut.annotate.actionable_mutation | Gene does not exist for variant at index 266 in batch 2 2025-08-01 01:31:16,223 | WARNING | pyMut.annotate.actionable_mutation | Unknown oncogenicity for variant at index 266 in batch 2 2025-08-01 01:31:16,223 | WARNING | pyMut.annotate.actionable_mutation | Gene does not exist for variant at index 267 in batch 2 2025-08-01 01:31:16,223 | WARNING | pyMut.annotate.actionable_mutation | Unknown oncogenicity for variant at index 267 in batch 2 2025-08-01 01:31:16,224 | WARNING | pyMut.annotate.actionable_mutation | Gene does not exist for variant at index 268 in batch 2 2025-08-01 01:31:16,224 | WARNING | pyMut.annotate.actionable_mutation | Unknown oncogenicity for variant at index 268 in batch 2 2025-08-01 01:31:16,224 | WARNING | pyMut.annotate.actionable_mutation | Gene does not exist for variant at index 269 in batch 2 2025-08-01 01:31:16,224 | WARNING | pyMut.annotate.actionable_mutation | Unknown oncogenicity for variant at index 269 in batch 2 2025-08-01 01:31:16,225 | WARNING | pyMut.annotate.actionable_mutation | Gene does not exist for variant at index 270 in batch 2 2025-08-01 01:31:16,225 | WARNING | pyMut.annotate.actionable_mutation | Unknown oncogenicity for variant at index 270 in batch 2 2025-08-01 01:31:16,225 | WARNING | pyMut.annotate.actionable_mutation | Gene does not exist for variant at index 271 in batch 2 2025-08-01 01:31:16,225 | WARNING | pyMut.annotate.actionable_mutation | Unknown oncogenicity for variant at index 271 in batch 2 2025-08-01 01:31:16,226 | WARNING | pyMut.annotate.actionable_mutation | Gene does not exist for variant at index 272 in batch 2 2025-08-01 01:31:16,226 | WARNING | pyMut.annotate.actionable_mutation | Unknown oncogenicity for variant at index 272 in batch 2 2025-08-01 01:31:16,226 | WARNING | pyMut.annotate.actionable_mutation | Gene does not exist for variant at index 273 in batch 2 2025-08-01 01:31:16,226 | WARNING | pyMut.annotate.actionable_mutation | Unknown oncogenicity for variant at index 273 in batch 2 2025-08-01 01:31:16,226 | WARNING | pyMut.annotate.actionable_mutation | Gene does not exist for variant at index 274 in batch 2 2025-08-01 01:31:16,227 | WARNING | pyMut.annotate.actionable_mutation | Unknown oncogenicity for variant at index 274 in batch 2 2025-08-01 01:31:16,227 | WARNING | pyMut.annotate.actionable_mutation | Gene does not exist for variant at index 275 in batch 2 2025-08-01 01:31:16,227 | WARNING | pyMut.annotate.actionable_mutation | Unknown oncogenicity for variant at index 275 in batch 2 2025-08-01 01:31:16,228 | WARNING | pyMut.annotate.actionable_mutation | Gene does not exist for variant at index 276 in batch 2 2025-08-01 01:31:16,228 | WARNING | pyMut.annotate.actionable_mutation | Unknown oncogenicity for variant at index 276 in batch 2 2025-08-01 01:31:16,228 | WARNING | pyMut.annotate.actionable_mutation | Gene does not exist for variant at index 277 in batch 2 2025-08-01 01:31:16,228 | WARNING | pyMut.annotate.actionable_mutation | Unknown oncogenicity for variant at index 277 in batch 2 2025-08-01 01:31:16,231 | WARNING | pyMut.annotate.actionable_mutation | Gene does not exist for variant at index 278 in batch 2 2025-08-01 01:31:16,231 | WARNING | pyMut.annotate.actionable_mutation | Unknown oncogenicity for variant at index 278 in batch 2 2025-08-01 01:31:16,231 | WARNING | pyMut.annotate.actionable_mutation | Gene does not exist for variant at index 279 in batch 2 2025-08-01 01:31:16,232 | WARNING | pyMut.annotate.actionable_mutation | Unknown oncogenicity for variant at index 279 in batch 2 2025-08-01 01:31:16,232 | WARNING | pyMut.annotate.actionable_mutation | Gene does not exist for variant at index 280 in batch 2 2025-08-01 01:31:16,233 | WARNING | pyMut.annotate.actionable_mutation | Unknown oncogenicity for variant at index 280 in batch 2 2025-08-01 01:31:16,233 | WARNING | pyMut.annotate.actionable_mutation | Gene does not exist for variant at index 281 in batch 2 2025-08-01 01:31:16,233 | WARNING | pyMut.annotate.actionable_mutation | Unknown oncogenicity for variant at index 281 in batch 2 2025-08-01 01:31:16,234 | WARNING | pyMut.annotate.actionable_mutation | Gene does not exist for variant at index 282 in batch 2 2025-08-01 01:31:16,234 | WARNING | pyMut.annotate.actionable_mutation | Unknown oncogenicity for variant at index 282 in batch 2 2025-08-01 01:31:16,235 | WARNING | pyMut.annotate.actionable_mutation | Gene does not exist for variant at index 283 in batch 2 2025-08-01 01:31:16,235 | WARNING | pyMut.annotate.actionable_mutation | Unknown oncogenicity for variant at index 283 in batch 2 2025-08-01 01:31:16,235 | WARNING | pyMut.annotate.actionable_mutation | Gene does not exist for variant at index 284 in batch 2 2025-08-01 01:31:16,236 | WARNING | pyMut.annotate.actionable_mutation | Unknown oncogenicity for variant at index 284 in batch 2 2025-08-01 01:31:16,236 | WARNING | pyMut.annotate.actionable_mutation | Gene does not exist for variant at index 285 in batch 2 2025-08-01 01:31:16,237 | WARNING | pyMut.annotate.actionable_mutation | Unknown oncogenicity for variant at index 285 in batch 2 2025-08-01 01:31:16,237 | WARNING | pyMut.annotate.actionable_mutation | Gene does not exist for variant at index 286 in batch 2 2025-08-01 01:31:16,237 | WARNING | pyMut.annotate.actionable_mutation | Unknown oncogenicity for variant at index 286 in batch 2 2025-08-01 01:31:16,237 | WARNING | pyMut.annotate.actionable_mutation | Gene does not exist for variant at index 287 in batch 2 2025-08-01 01:31:16,238 | WARNING | pyMut.annotate.actionable_mutation | Unknown oncogenicity for variant at index 287 in batch 2 2025-08-01 01:31:16,238 | WARNING | pyMut.annotate.actionable_mutation | Gene does not exist for variant at index 288 in batch 2 2025-08-01 01:31:16,239 | WARNING | pyMut.annotate.actionable_mutation | Unknown oncogenicity for variant at index 288 in batch 2 2025-08-01 01:31:16,239 | WARNING | pyMut.annotate.actionable_mutation | Gene does not exist for variant at index 289 in batch 2 2025-08-01 01:31:16,239 | WARNING | pyMut.annotate.actionable_mutation | Unknown oncogenicity for variant at index 289 in batch 2 2025-08-01 01:31:16,240 | WARNING | pyMut.annotate.actionable_mutation | Gene does not exist for variant at index 290 in batch 2 2025-08-01 01:31:16,240 | WARNING | pyMut.annotate.actionable_mutation | Unknown oncogenicity for variant at index 290 in batch 2 2025-08-01 01:31:16,240 | WARNING | pyMut.annotate.actionable_mutation | Gene does not exist for variant at index 291 in batch 2 2025-08-01 01:31:16,240 | WARNING | pyMut.annotate.actionable_mutation | Unknown oncogenicity for variant at index 291 in batch 2 2025-08-01 01:31:16,241 | WARNING | pyMut.annotate.actionable_mutation | Gene does not exist for variant at index 292 in batch 2 2025-08-01 01:31:16,241 | WARNING | pyMut.annotate.actionable_mutation | Unknown oncogenicity for variant at index 292 in batch 2 2025-08-01 01:31:16,241 | WARNING | pyMut.annotate.actionable_mutation | Gene does not exist for variant at index 293 in batch 2 2025-08-01 01:31:16,241 | WARNING | pyMut.annotate.actionable_mutation | Unknown oncogenicity for variant at index 293 in batch 2 2025-08-01 01:31:16,241 | WARNING | pyMut.annotate.actionable_mutation | Gene does not exist for variant at index 294 in batch 2 2025-08-01 01:31:16,242 | WARNING | pyMut.annotate.actionable_mutation | Unknown oncogenicity for variant at index 294 in batch 2 2025-08-01 01:31:16,242 | WARNING | pyMut.annotate.actionable_mutation | Gene does not exist for variant at index 295 in batch 2 2025-08-01 01:31:16,242 | WARNING | pyMut.annotate.actionable_mutation | Unknown oncogenicity for variant at index 295 in batch 2 2025-08-01 01:31:16,243 | WARNING | pyMut.annotate.actionable_mutation | Gene does not exist for variant at index 296 in batch 2 2025-08-01 01:31:16,243 | WARNING | pyMut.annotate.actionable_mutation | Unknown oncogenicity for variant at index 296 in batch 2 2025-08-01 01:31:16,243 | WARNING | pyMut.annotate.actionable_mutation | Gene does not exist for variant at index 297 in batch 2 2025-08-01 01:31:16,243 | WARNING | pyMut.annotate.actionable_mutation | Unknown oncogenicity for variant at index 297 in batch 2 2025-08-01 01:31:16,244 | WARNING | pyMut.annotate.actionable_mutation | Gene does not exist for variant at index 298 in batch 2 2025-08-01 01:31:16,244 | WARNING | pyMut.annotate.actionable_mutation | Unknown oncogenicity for variant at index 298 in batch 2 2025-08-01 01:31:16,244 | WARNING | pyMut.annotate.actionable_mutation | Gene does not exist for variant at index 299 in batch 2 2025-08-01 01:31:16,244 | WARNING | pyMut.annotate.actionable_mutation | Unknown oncogenicity for variant at index 299 in batch 2 2025-08-01 01:31:16,245 | WARNING | pyMut.annotate.actionable_mutation | Gene does not exist for variant at index 300 in batch 2 2025-08-01 01:31:16,245 | WARNING | pyMut.annotate.actionable_mutation | Unknown oncogenicity for variant at index 300 in batch 2 2025-08-01 01:31:16,245 | WARNING | pyMut.annotate.actionable_mutation | Gene does not exist for variant at index 301 in batch 2 2025-08-01 01:31:16,245 | WARNING | pyMut.annotate.actionable_mutation | Unknown oncogenicity for variant at index 301 in batch 2 2025-08-01 01:31:16,246 | WARNING | pyMut.annotate.actionable_mutation | Gene does not exist for variant at index 302 in batch 2 2025-08-01 01:31:16,246 | WARNING | pyMut.annotate.actionable_mutation | Unknown oncogenicity for variant at index 302 in batch 2 2025-08-01 01:31:16,246 | WARNING | pyMut.annotate.actionable_mutation | Gene does not exist for variant at index 303 in batch 2 2025-08-01 01:31:16,246 | WARNING | pyMut.annotate.actionable_mutation | Unknown oncogenicity for variant at index 303 in batch 2 2025-08-01 01:31:16,247 | WARNING | pyMut.annotate.actionable_mutation | Gene does not exist for variant at index 304 in batch 2 2025-08-01 01:31:16,247 | WARNING | pyMut.annotate.actionable_mutation | Unknown oncogenicity for variant at index 304 in batch 2 2025-08-01 01:31:16,249 | WARNING | pyMut.annotate.actionable_mutation | Gene does not exist for variant at index 305 in batch 2 2025-08-01 01:31:16,250 | WARNING | pyMut.annotate.actionable_mutation | Unknown oncogenicity for variant at index 305 in batch 2 2025-08-01 01:31:16,250 | WARNING | pyMut.annotate.actionable_mutation | Gene does not exist for variant at index 306 in batch 2 2025-08-01 01:31:16,250 | WARNING | pyMut.annotate.actionable_mutation | Unknown oncogenicity for variant at index 306 in batch 2 2025-08-01 01:31:16,251 | WARNING | pyMut.annotate.actionable_mutation | Gene does not exist for variant at index 307 in batch 2 2025-08-01 01:31:16,251 | WARNING | pyMut.annotate.actionable_mutation | Unknown oncogenicity for variant at index 307 in batch 2 2025-08-01 01:31:16,251 | WARNING | pyMut.annotate.actionable_mutation | Gene does not exist for variant at index 308 in batch 2 2025-08-01 01:31:16,252 | WARNING | pyMut.annotate.actionable_mutation | Unknown oncogenicity for variant at index 308 in batch 2 2025-08-01 01:31:16,252 | WARNING | pyMut.annotate.actionable_mutation | Gene does not exist for variant at index 309 in batch 2 2025-08-01 01:31:16,253 | WARNING | pyMut.annotate.actionable_mutation | Unknown oncogenicity for variant at index 309 in batch 2 2025-08-01 01:31:16,253 | WARNING | pyMut.annotate.actionable_mutation | Gene does not exist for variant at index 310 in batch 2 2025-08-01 01:31:16,253 | WARNING | pyMut.annotate.actionable_mutation | Unknown oncogenicity for variant at index 310 in batch 2 2025-08-01 01:31:16,253 | WARNING | pyMut.annotate.actionable_mutation | Unknown oncogenicity for variant at index 311 in batch 2 2025-08-01 01:31:16,254 | WARNING | pyMut.annotate.actionable_mutation | Unknown oncogenicity for variant at index 312 in batch 2 2025-08-01 01:31:16,254 | WARNING | pyMut.annotate.actionable_mutation | Gene does not exist for variant at index 313 in batch 2 2025-08-01 01:31:16,254 | WARNING | pyMut.annotate.actionable_mutation | Unknown oncogenicity for variant at index 313 in batch 2 2025-08-01 01:31:16,254 | WARNING | pyMut.annotate.actionable_mutation | Unknown oncogenicity for variant at index 314 in batch 2 2025-08-01 01:31:16,255 | WARNING | pyMut.annotate.actionable_mutation | Gene does not exist for variant at index 315 in batch 2 2025-08-01 01:31:16,255 | WARNING | pyMut.annotate.actionable_mutation | Unknown oncogenicity for variant at index 315 in batch 2 2025-08-01 01:31:16,256 | WARNING | pyMut.annotate.actionable_mutation | Gene does not exist for variant at index 316 in batch 2 2025-08-01 01:31:16,256 | WARNING | pyMut.annotate.actionable_mutation | Unknown oncogenicity for variant at index 316 in batch 2 2025-08-01 01:31:16,256 | WARNING | pyMut.annotate.actionable_mutation | Gene does not exist for variant at index 320 in batch 2 2025-08-01 01:31:16,257 | WARNING | pyMut.annotate.actionable_mutation | Unknown oncogenicity for variant at index 320 in batch 2 2025-08-01 01:31:16,257 | WARNING | pyMut.annotate.actionable_mutation | Gene does not exist for variant at index 321 in batch 2 2025-08-01 01:31:16,258 | WARNING | pyMut.annotate.actionable_mutation | Unknown oncogenicity for variant at index 321 in batch 2 2025-08-01 01:31:16,258 | WARNING | pyMut.annotate.actionable_mutation | Gene does not exist for variant at index 322 in batch 2 2025-08-01 01:31:16,259 | WARNING | pyMut.annotate.actionable_mutation | Unknown oncogenicity for variant at index 322 in batch 2 2025-08-01 01:31:16,259 | WARNING | pyMut.annotate.actionable_mutation | Gene does not exist for variant at index 323 in batch 2 2025-08-01 01:31:16,259 | WARNING | pyMut.annotate.actionable_mutation | Unknown oncogenicity for variant at index 323 in batch 2 2025-08-01 01:31:16,259 | WARNING | pyMut.annotate.actionable_mutation | Gene does not exist for variant at index 324 in batch 2 2025-08-01 01:31:16,260 | WARNING | pyMut.annotate.actionable_mutation | Unknown oncogenicity for variant at index 324 in batch 2 2025-08-01 01:31:16,260 | WARNING | pyMut.annotate.actionable_mutation | Gene does not exist for variant at index 325 in batch 2 2025-08-01 01:31:16,260 | WARNING | pyMut.annotate.actionable_mutation | Unknown oncogenicity for variant at index 325 in batch 2 2025-08-01 01:31:16,260 | WARNING | pyMut.annotate.actionable_mutation | Gene does not exist for variant at index 326 in batch 2 2025-08-01 01:31:16,261 | WARNING | pyMut.annotate.actionable_mutation | Unknown oncogenicity for variant at index 326 in batch 2 2025-08-01 01:31:16,261 | WARNING | pyMut.annotate.actionable_mutation | Gene does not exist for variant at index 327 in batch 2 2025-08-01 01:31:16,262 | WARNING | pyMut.annotate.actionable_mutation | Unknown oncogenicity for variant at index 327 in batch 2 2025-08-01 01:31:16,262 | WARNING | pyMut.annotate.actionable_mutation | Gene does not exist for variant at index 328 in batch 2 2025-08-01 01:31:16,262 | WARNING | pyMut.annotate.actionable_mutation | Unknown oncogenicity for variant at index 328 in batch 2 2025-08-01 01:31:16,262 | WARNING | pyMut.annotate.actionable_mutation | Gene does not exist for variant at index 329 in batch 2 2025-08-01 01:31:16,263 | WARNING | pyMut.annotate.actionable_mutation | Unknown oncogenicity for variant at index 329 in batch 2 2025-08-01 01:31:16,263 | WARNING | pyMut.annotate.actionable_mutation | Gene does not exist for variant at index 330 in batch 2 2025-08-01 01:31:16,264 | WARNING | pyMut.annotate.actionable_mutation | Unknown oncogenicity for variant at index 330 in batch 2 2025-08-01 01:31:16,264 | WARNING | pyMut.annotate.actionable_mutation | Unknown oncogenicity for variant at index 331 in batch 2 2025-08-01 01:31:16,264 | WARNING | pyMut.annotate.actionable_mutation | Gene does not exist for variant at index 332 in batch 2 2025-08-01 01:31:16,265 | WARNING | pyMut.annotate.actionable_mutation | Unknown oncogenicity for variant at index 332 in batch 2 2025-08-01 01:31:16,265 | WARNING | pyMut.annotate.actionable_mutation | Gene does not exist for variant at index 333 in batch 2 2025-08-01 01:31:16,265 | WARNING | pyMut.annotate.actionable_mutation | Unknown oncogenicity for variant at index 333 in batch 2 2025-08-01 01:31:16,265 | WARNING | pyMut.annotate.actionable_mutation | Gene does not exist for variant at index 334 in batch 2 2025-08-01 01:31:16,265 | WARNING | pyMut.annotate.actionable_mutation | Unknown oncogenicity for variant at index 334 in batch 2 2025-08-01 01:31:16,266 | WARNING | pyMut.annotate.actionable_mutation | Gene does not exist for variant at index 335 in batch 2 2025-08-01 01:31:16,266 | WARNING | pyMut.annotate.actionable_mutation | Unknown oncogenicity for variant at index 335 in batch 2 2025-08-01 01:31:16,266 | WARNING | pyMut.annotate.actionable_mutation | Gene does not exist for variant at index 336 in batch 2 2025-08-01 01:31:16,266 | WARNING | pyMut.annotate.actionable_mutation | Unknown oncogenicity for variant at index 336 in batch 2 2025-08-01 01:31:16,267 | WARNING | pyMut.annotate.actionable_mutation | Gene does not exist for variant at index 337 in batch 2 2025-08-01 01:31:16,267 | WARNING | pyMut.annotate.actionable_mutation | Unknown oncogenicity for variant at index 337 in batch 2 2025-08-01 01:31:16,268 | WARNING | pyMut.annotate.actionable_mutation | Gene does not exist for variant at index 338 in batch 2 2025-08-01 01:31:16,268 | WARNING | pyMut.annotate.actionable_mutation | Unknown oncogenicity for variant at index 338 in batch 2 2025-08-01 01:31:16,269 | WARNING | pyMut.annotate.actionable_mutation | Gene does not exist for variant at index 339 in batch 2 2025-08-01 01:31:16,269 | WARNING | pyMut.annotate.actionable_mutation | Unknown oncogenicity for variant at index 339 in batch 2 2025-08-01 01:31:16,269 | WARNING | pyMut.annotate.actionable_mutation | Gene does not exist for variant at index 340 in batch 2 2025-08-01 01:31:16,270 | WARNING | pyMut.annotate.actionable_mutation | Unknown oncogenicity for variant at index 340 in batch 2 2025-08-01 01:31:16,270 | WARNING | pyMut.annotate.actionable_mutation | Gene does not exist for variant at index 341 in batch 2 2025-08-01 01:31:16,270 | WARNING | pyMut.annotate.actionable_mutation | Unknown oncogenicity for variant at index 341 in batch 2 2025-08-01 01:31:16,271 | WARNING | pyMut.annotate.actionable_mutation | Gene does not exist for variant at index 342 in batch 2 2025-08-01 01:31:16,271 | WARNING | pyMut.annotate.actionable_mutation | Unknown oncogenicity for variant at index 342 in batch 2 2025-08-01 01:31:16,271 | WARNING | pyMut.annotate.actionable_mutation | Gene does not exist for variant at index 343 in batch 2 2025-08-01 01:31:16,271 | WARNING | pyMut.annotate.actionable_mutation | Unknown oncogenicity for variant at index 343 in batch 2 2025-08-01 01:31:16,272 | WARNING | pyMut.annotate.actionable_mutation | Gene does not exist for variant at index 344 in batch 2 2025-08-01 01:31:16,272 | WARNING | pyMut.annotate.actionable_mutation | Unknown oncogenicity for variant at index 344 in batch 2 2025-08-01 01:31:16,273 | WARNING | pyMut.annotate.actionable_mutation | Unknown oncogenicity for variant at index 345 in batch 2 2025-08-01 01:31:16,273 | WARNING | pyMut.annotate.actionable_mutation | Gene does not exist for variant at index 346 in batch 2 2025-08-01 01:31:16,273 | WARNING | pyMut.annotate.actionable_mutation | Unknown oncogenicity for variant at index 346 in batch 2 2025-08-01 01:31:16,274 | WARNING | pyMut.annotate.actionable_mutation | Gene does not exist for variant at index 347 in batch 2 2025-08-01 01:31:16,274 | WARNING | pyMut.annotate.actionable_mutation | Unknown oncogenicity for variant at index 347 in batch 2 2025-08-01 01:31:16,274 | WARNING | pyMut.annotate.actionable_mutation | Gene does not exist for variant at index 348 in batch 2 2025-08-01 01:31:16,275 | WARNING | pyMut.annotate.actionable_mutation | Unknown oncogenicity for variant at index 348 in batch 2 2025-08-01 01:31:16,275 | WARNING | pyMut.annotate.actionable_mutation | Gene does not exist for variant at index 349 in batch 2 2025-08-01 01:31:16,275 | WARNING | pyMut.annotate.actionable_mutation | Unknown oncogenicity for variant at index 349 in batch 2 2025-08-01 01:31:16,276 | WARNING | pyMut.annotate.actionable_mutation | Gene does not exist for variant at index 350 in batch 2 2025-08-01 01:31:16,276 | WARNING | pyMut.annotate.actionable_mutation | Unknown oncogenicity for variant at index 350 in batch 2 2025-08-01 01:31:16,276 | WARNING | pyMut.annotate.actionable_mutation | Gene does not exist for variant at index 351 in batch 2 2025-08-01 01:31:16,276 | WARNING | pyMut.annotate.actionable_mutation | Unknown oncogenicity for variant at index 351 in batch 2 2025-08-01 01:31:16,277 | WARNING | pyMut.annotate.actionable_mutation | Gene does not exist for variant at index 352 in batch 2 2025-08-01 01:31:16,277 | WARNING | pyMut.annotate.actionable_mutation | Unknown oncogenicity for variant at index 352 in batch 2 2025-08-01 01:31:16,278 | WARNING | pyMut.annotate.actionable_mutation | Gene does not exist for variant at index 353 in batch 2 2025-08-01 01:31:16,278 | WARNING | pyMut.annotate.actionable_mutation | Unknown oncogenicity for variant at index 353 in batch 2 2025-08-01 01:31:16,278 | WARNING | pyMut.annotate.actionable_mutation | Gene does not exist for variant at index 354 in batch 2 2025-08-01 01:31:16,279 | WARNING | pyMut.annotate.actionable_mutation | Unknown oncogenicity for variant at index 354 in batch 2 2025-08-01 01:31:16,279 | WARNING | pyMut.annotate.actionable_mutation | Gene does not exist for variant at index 355 in batch 2 2025-08-01 01:31:16,279 | WARNING | pyMut.annotate.actionable_mutation | Unknown oncogenicity for variant at index 355 in batch 2 2025-08-01 01:31:16,279 | WARNING | pyMut.annotate.actionable_mutation | Gene does not exist for variant at index 356 in batch 2 2025-08-01 01:31:16,280 | WARNING | pyMut.annotate.actionable_mutation | Unknown oncogenicity for variant at index 356 in batch 2 2025-08-01 01:31:16,280 | WARNING | pyMut.annotate.actionable_mutation | Gene does not exist for variant at index 357 in batch 2 2025-08-01 01:31:16,281 | WARNING | pyMut.annotate.actionable_mutation | Unknown oncogenicity for variant at index 357 in batch 2 2025-08-01 01:31:16,281 | WARNING | pyMut.annotate.actionable_mutation | Gene does not exist for variant at index 358 in batch 2 2025-08-01 01:31:16,281 | WARNING | pyMut.annotate.actionable_mutation | Unknown oncogenicity for variant at index 358 in batch 2 2025-08-01 01:31:16,282 | WARNING | pyMut.annotate.actionable_mutation | Gene does not exist for variant at index 359 in batch 2 2025-08-01 01:31:16,282 | WARNING | pyMut.annotate.actionable_mutation | Unknown oncogenicity for variant at index 359 in batch 2 2025-08-01 01:31:16,282 | WARNING | pyMut.annotate.actionable_mutation | Gene does not exist for variant at index 360 in batch 2 2025-08-01 01:31:16,283 | WARNING | pyMut.annotate.actionable_mutation | Unknown oncogenicity for variant at index 360 in batch 2 2025-08-01 01:31:16,283 | WARNING | pyMut.annotate.actionable_mutation | Unknown oncogenicity for variant at index 361 in batch 2 2025-08-01 01:31:16,283 | WARNING | pyMut.annotate.actionable_mutation | Gene does not exist for variant at index 362 in batch 2 2025-08-01 01:31:16,284 | WARNING | pyMut.annotate.actionable_mutation | Unknown oncogenicity for variant at index 362 in batch 2 2025-08-01 01:31:16,284 | WARNING | pyMut.annotate.actionable_mutation | Gene does not exist for variant at index 363 in batch 2 2025-08-01 01:31:16,284 | WARNING | pyMut.annotate.actionable_mutation | Unknown oncogenicity for variant at index 363 in batch 2 2025-08-01 01:31:16,285 | WARNING | pyMut.annotate.actionable_mutation | Gene does not exist for variant at index 364 in batch 2 2025-08-01 01:31:16,285 | WARNING | pyMut.annotate.actionable_mutation | Unknown oncogenicity for variant at index 364 in batch 2 2025-08-01 01:31:16,285 | WARNING | pyMut.annotate.actionable_mutation | Gene does not exist for variant at index 365 in batch 2 2025-08-01 01:31:16,285 | WARNING | pyMut.annotate.actionable_mutation | Unknown oncogenicity for variant at index 365 in batch 2 2025-08-01 01:31:16,286 | WARNING | pyMut.annotate.actionable_mutation | Gene does not exist for variant at index 366 in batch 2 2025-08-01 01:31:16,286 | WARNING | pyMut.annotate.actionable_mutation | Unknown oncogenicity for variant at index 366 in batch 2 2025-08-01 01:31:16,287 | WARNING | pyMut.annotate.actionable_mutation | Unknown oncogenicity for variant at index 367 in batch 2 2025-08-01 01:31:16,287 | WARNING | pyMut.annotate.actionable_mutation | Gene does not exist for variant at index 368 in batch 2 2025-08-01 01:31:16,287 | WARNING | pyMut.annotate.actionable_mutation | Unknown oncogenicity for variant at index 368 in batch 2 2025-08-01 01:31:16,288 | WARNING | pyMut.annotate.actionable_mutation | Gene does not exist for variant at index 369 in batch 2 2025-08-01 01:31:16,289 | WARNING | pyMut.annotate.actionable_mutation | Unknown oncogenicity for variant at index 369 in batch 2 2025-08-01 01:31:16,289 | WARNING | pyMut.annotate.actionable_mutation | Gene does not exist for variant at index 370 in batch 2 2025-08-01 01:31:16,290 | WARNING | pyMut.annotate.actionable_mutation | Unknown oncogenicity for variant at index 370 in batch 2 2025-08-01 01:31:16,290 | WARNING | pyMut.annotate.actionable_mutation | Gene does not exist for variant at index 371 in batch 2 2025-08-01 01:31:16,290 | WARNING | pyMut.annotate.actionable_mutation | Unknown oncogenicity for variant at index 371 in batch 2 2025-08-01 01:31:16,291 | WARNING | pyMut.annotate.actionable_mutation | Gene does not exist for variant at index 372 in batch 2 2025-08-01 01:31:16,291 | WARNING | pyMut.annotate.actionable_mutation | Unknown oncogenicity for variant at index 372 in batch 2 2025-08-01 01:31:16,291 | WARNING | pyMut.annotate.actionable_mutation | Gene does not exist for variant at index 373 in batch 2 2025-08-01 01:31:16,292 | WARNING | pyMut.annotate.actionable_mutation | Unknown oncogenicity for variant at index 373 in batch 2 2025-08-01 01:31:16,292 | WARNING | pyMut.annotate.actionable_mutation | Gene does not exist for variant at index 374 in batch 2 2025-08-01 01:31:16,292 | WARNING | pyMut.annotate.actionable_mutation | Unknown oncogenicity for variant at index 374 in batch 2 2025-08-01 01:31:16,293 | WARNING | pyMut.annotate.actionable_mutation | Gene does not exist for variant at index 375 in batch 2 2025-08-01 01:31:16,293 | WARNING | pyMut.annotate.actionable_mutation | Unknown oncogenicity for variant at index 375 in batch 2 2025-08-01 01:31:16,294 | WARNING | pyMut.annotate.actionable_mutation | Unknown oncogenicity for variant at index 376 in batch 2 2025-08-01 01:31:16,294 | WARNING | pyMut.annotate.actionable_mutation | Gene does not exist for variant at index 377 in batch 2 2025-08-01 01:31:16,294 | WARNING | pyMut.annotate.actionable_mutation | Unknown oncogenicity for variant at index 377 in batch 2 2025-08-01 01:31:16,294 | WARNING | pyMut.annotate.actionable_mutation | Gene does not exist for variant at index 378 in batch 2 2025-08-01 01:31:16,295 | WARNING | pyMut.annotate.actionable_mutation | Unknown oncogenicity for variant at index 378 in batch 2 2025-08-01 01:31:16,295 | WARNING | pyMut.annotate.actionable_mutation | Gene does not exist for variant at index 379 in batch 2 2025-08-01 01:31:16,295 | WARNING | pyMut.annotate.actionable_mutation | Unknown oncogenicity for variant at index 379 in batch 2 2025-08-01 01:31:16,296 | WARNING | pyMut.annotate.actionable_mutation | Gene does not exist for variant at index 380 in batch 2 2025-08-01 01:31:16,296 | WARNING | pyMut.annotate.actionable_mutation | Unknown oncogenicity for variant at index 380 in batch 2 2025-08-01 01:31:16,296 | WARNING | pyMut.annotate.actionable_mutation | Unknown oncogenicity for variant at index 381 in batch 2 2025-08-01 01:31:16,297 | WARNING | pyMut.annotate.actionable_mutation | Gene does not exist for variant at index 382 in batch 2 2025-08-01 01:31:16,297 | WARNING | pyMut.annotate.actionable_mutation | Unknown oncogenicity for variant at index 382 in batch 2 2025-08-01 01:31:16,297 | WARNING | pyMut.annotate.actionable_mutation | Gene does not exist for variant at index 383 in batch 2 2025-08-01 01:31:16,297 | WARNING | pyMut.annotate.actionable_mutation | Unknown oncogenicity for variant at index 383 in batch 2 2025-08-01 01:31:16,297 | WARNING | pyMut.annotate.actionable_mutation | Gene does not exist for variant at index 384 in batch 2 2025-08-01 01:31:16,298 | WARNING | pyMut.annotate.actionable_mutation | Unknown oncogenicity for variant at index 384 in batch 2 2025-08-01 01:31:16,298 | WARNING | pyMut.annotate.actionable_mutation | Gene does not exist for variant at index 385 in batch 2 2025-08-01 01:31:16,298 | WARNING | pyMut.annotate.actionable_mutation | Unknown oncogenicity for variant at index 385 in batch 2 2025-08-01 01:31:16,299 | WARNING | pyMut.annotate.actionable_mutation | Gene does not exist for variant at index 386 in batch 2 2025-08-01 01:31:16,299 | WARNING | pyMut.annotate.actionable_mutation | Unknown oncogenicity for variant at index 386 in batch 2 2025-08-01 01:31:16,299 | WARNING | pyMut.annotate.actionable_mutation | Gene does not exist for variant at index 387 in batch 2 2025-08-01 01:31:16,299 | WARNING | pyMut.annotate.actionable_mutation | Unknown oncogenicity for variant at index 387 in batch 2 2025-08-01 01:31:16,299 | WARNING | pyMut.annotate.actionable_mutation | Gene does not exist for variant at index 388 in batch 2 2025-08-01 01:31:16,300 | WARNING | pyMut.annotate.actionable_mutation | Unknown oncogenicity for variant at index 388 in batch 2 2025-08-01 01:31:16,300 | WARNING | pyMut.annotate.actionable_mutation | Gene does not exist for variant at index 389 in batch 2 2025-08-01 01:31:16,300 | WARNING | pyMut.annotate.actionable_mutation | Unknown oncogenicity for variant at index 389 in batch 2 2025-08-01 01:31:16,300 | WARNING | pyMut.annotate.actionable_mutation | Gene does not exist for variant at index 390 in batch 2 2025-08-01 01:31:16,301 | WARNING | pyMut.annotate.actionable_mutation | Unknown oncogenicity for variant at index 390 in batch 2 2025-08-01 01:31:16,301 | WARNING | pyMut.annotate.actionable_mutation | Gene does not exist for variant at index 391 in batch 2 2025-08-01 01:31:16,301 | WARNING | pyMut.annotate.actionable_mutation | Unknown oncogenicity for variant at index 391 in batch 2 2025-08-01 01:31:16,301 | WARNING | pyMut.annotate.actionable_mutation | Gene does not exist for variant at index 392 in batch 2 2025-08-01 01:31:16,301 | WARNING | pyMut.annotate.actionable_mutation | Unknown oncogenicity for variant at index 392 in batch 2 2025-08-01 01:31:16,302 | WARNING | pyMut.annotate.actionable_mutation | Gene does not exist for variant at index 393 in batch 2 2025-08-01 01:31:16,302 | WARNING | pyMut.annotate.actionable_mutation | Unknown oncogenicity for variant at index 393 in batch 2 2025-08-01 01:31:16,302 | WARNING | pyMut.annotate.actionable_mutation | Gene does not exist for variant at index 394 in batch 2 2025-08-01 01:31:16,302 | WARNING | pyMut.annotate.actionable_mutation | Unknown oncogenicity for variant at index 394 in batch 2 2025-08-01 01:31:16,303 | WARNING | pyMut.annotate.actionable_mutation | Gene does not exist for variant at index 395 in batch 2 2025-08-01 01:31:16,303 | WARNING | pyMut.annotate.actionable_mutation | Unknown oncogenicity for variant at index 395 in batch 2 2025-08-01 01:31:16,306 | WARNING | pyMut.annotate.actionable_mutation | Gene does not exist for variant at index 396 in batch 2 2025-08-01 01:31:16,306 | WARNING | pyMut.annotate.actionable_mutation | Unknown oncogenicity for variant at index 396 in batch 2 2025-08-01 01:31:16,306 | WARNING | pyMut.annotate.actionable_mutation | Gene does not exist for variant at index 397 in batch 2 2025-08-01 01:31:16,307 | WARNING | pyMut.annotate.actionable_mutation | Unknown oncogenicity for variant at index 397 in batch 2 2025-08-01 01:31:16,307 | WARNING | pyMut.annotate.actionable_mutation | Gene does not exist for variant at index 398 in batch 2 2025-08-01 01:31:16,307 | WARNING | pyMut.annotate.actionable_mutation | Unknown oncogenicity for variant at index 398 in batch 2 2025-08-01 01:31:16,308 | WARNING | pyMut.annotate.actionable_mutation | Gene does not exist for variant at index 399 in batch 2 2025-08-01 01:31:16,308 | WARNING | pyMut.annotate.actionable_mutation | Unknown oncogenicity for variant at index 399 in batch 2 2025-08-01 01:31:16,308 | WARNING | pyMut.annotate.actionable_mutation | Gene does not exist for variant at index 400 in batch 2 2025-08-01 01:31:16,308 | WARNING | pyMut.annotate.actionable_mutation | Unknown oncogenicity for variant at index 400 in batch 2 2025-08-01 01:31:16,308 | WARNING | pyMut.annotate.actionable_mutation | Gene does not exist for variant at index 401 in batch 2 2025-08-01 01:31:16,309 | WARNING | pyMut.annotate.actionable_mutation | Unknown oncogenicity for variant at index 401 in batch 2 2025-08-01 01:31:16,309 | WARNING | pyMut.annotate.actionable_mutation | Gene does not exist for variant at index 402 in batch 2 2025-08-01 01:31:16,310 | WARNING | pyMut.annotate.actionable_mutation | Unknown oncogenicity for variant at index 402 in batch 2 2025-08-01 01:31:16,310 | WARNING | pyMut.annotate.actionable_mutation | Gene does not exist for variant at index 403 in batch 2 2025-08-01 01:31:16,310 | WARNING | pyMut.annotate.actionable_mutation | Unknown oncogenicity for variant at index 403 in batch 2 2025-08-01 01:31:16,311 | WARNING | pyMut.annotate.actionable_mutation | Gene does not exist for variant at index 404 in batch 2 2025-08-01 01:31:16,311 | WARNING | pyMut.annotate.actionable_mutation | Unknown oncogenicity for variant at index 404 in batch 2 2025-08-01 01:31:16,311 | WARNING | pyMut.annotate.actionable_mutation | Gene does not exist for variant at index 405 in batch 2 2025-08-01 01:31:16,311 | WARNING | pyMut.annotate.actionable_mutation | Unknown oncogenicity for variant at index 405 in batch 2 2025-08-01 01:31:16,312 | WARNING | pyMut.annotate.actionable_mutation | Gene does not exist for variant at index 406 in batch 2 2025-08-01 01:31:16,312 | WARNING | pyMut.annotate.actionable_mutation | Unknown oncogenicity for variant at index 406 in batch 2 2025-08-01 01:31:16,312 | WARNING | pyMut.annotate.actionable_mutation | Gene does not exist for variant at index 407 in batch 2 2025-08-01 01:31:16,312 | WARNING | pyMut.annotate.actionable_mutation | Unknown oncogenicity for variant at index 407 in batch 2 2025-08-01 01:31:16,312 | WARNING | pyMut.annotate.actionable_mutation | Gene does not exist for variant at index 408 in batch 2 2025-08-01 01:31:16,313 | WARNING | pyMut.annotate.actionable_mutation | Unknown oncogenicity for variant at index 408 in batch 2 2025-08-01 01:31:16,313 | WARNING | pyMut.annotate.actionable_mutation | Gene does not exist for variant at index 409 in batch 2 2025-08-01 01:31:16,313 | WARNING | pyMut.annotate.actionable_mutation | Unknown oncogenicity for variant at index 409 in batch 2 2025-08-01 01:31:16,313 | WARNING | pyMut.annotate.actionable_mutation | Gene does not exist for variant at index 410 in batch 2 2025-08-01 01:31:16,314 | WARNING | pyMut.annotate.actionable_mutation | Unknown oncogenicity for variant at index 410 in batch 2 2025-08-01 01:31:16,314 | WARNING | pyMut.annotate.actionable_mutation | Gene does not exist for variant at index 411 in batch 2 2025-08-01 01:31:16,314 | WARNING | pyMut.annotate.actionable_mutation | Unknown oncogenicity for variant at index 411 in batch 2 2025-08-01 01:31:16,314 | WARNING | pyMut.annotate.actionable_mutation | Gene does not exist for variant at index 412 in batch 2 2025-08-01 01:31:16,315 | WARNING | pyMut.annotate.actionable_mutation | Unknown oncogenicity for variant at index 412 in batch 2 2025-08-01 01:31:16,315 | WARNING | pyMut.annotate.actionable_mutation | Gene does not exist for variant at index 413 in batch 2 2025-08-01 01:31:16,315 | WARNING | pyMut.annotate.actionable_mutation | Unknown oncogenicity for variant at index 413 in batch 2 2025-08-01 01:31:16,315 | WARNING | pyMut.annotate.actionable_mutation | Gene does not exist for variant at index 414 in batch 2 2025-08-01 01:31:16,316 | WARNING | pyMut.annotate.actionable_mutation | Unknown oncogenicity for variant at index 414 in batch 2 2025-08-01 01:31:16,316 | WARNING | pyMut.annotate.actionable_mutation | Gene does not exist for variant at index 415 in batch 2 2025-08-01 01:31:16,319 | WARNING | pyMut.annotate.actionable_mutation | Unknown oncogenicity for variant at index 415 in batch 2 2025-08-01 01:31:16,319 | WARNING | pyMut.annotate.actionable_mutation | Gene does not exist for variant at index 416 in batch 2 2025-08-01 01:31:16,320 | WARNING | pyMut.annotate.actionable_mutation | Unknown oncogenicity for variant at index 416 in batch 2 2025-08-01 01:31:16,320 | WARNING | pyMut.annotate.actionable_mutation | Gene does not exist for variant at index 417 in batch 2 2025-08-01 01:31:16,320 | WARNING | pyMut.annotate.actionable_mutation | Unknown oncogenicity for variant at index 417 in batch 2 2025-08-01 01:31:16,320 | WARNING | pyMut.annotate.actionable_mutation | Gene does not exist for variant at index 418 in batch 2 2025-08-01 01:31:16,321 | WARNING | pyMut.annotate.actionable_mutation | Unknown oncogenicity for variant at index 418 in batch 2 2025-08-01 01:31:16,321 | WARNING | pyMut.annotate.actionable_mutation | Gene does not exist for variant at index 419 in batch 2 2025-08-01 01:31:16,321 | WARNING | pyMut.annotate.actionable_mutation | Unknown oncogenicity for variant at index 419 in batch 2 2025-08-01 01:31:16,321 | WARNING | pyMut.annotate.actionable_mutation | Gene does not exist for variant at index 420 in batch 2 2025-08-01 01:31:16,322 | WARNING | pyMut.annotate.actionable_mutation | Unknown oncogenicity for variant at index 420 in batch 2 2025-08-01 01:31:16,322 | WARNING | pyMut.annotate.actionable_mutation | Gene does not exist for variant at index 421 in batch 2 2025-08-01 01:31:16,322 | WARNING | pyMut.annotate.actionable_mutation | Unknown oncogenicity for variant at index 421 in batch 2 2025-08-01 01:31:16,323 | WARNING | pyMut.annotate.actionable_mutation | Gene does not exist for variant at index 422 in batch 2 2025-08-01 01:31:16,323 | WARNING | pyMut.annotate.actionable_mutation | Unknown oncogenicity for variant at index 422 in batch 2 2025-08-01 01:31:16,323 | WARNING | pyMut.annotate.actionable_mutation | Gene does not exist for variant at index 423 in batch 2 2025-08-01 01:31:16,325 | WARNING | pyMut.annotate.actionable_mutation | Unknown oncogenicity for variant at index 423 in batch 2 2025-08-01 01:31:16,325 | WARNING | pyMut.annotate.actionable_mutation | Gene does not exist for variant at index 424 in batch 2 2025-08-01 01:31:16,326 | WARNING | pyMut.annotate.actionable_mutation | Unknown oncogenicity for variant at index 424 in batch 2 2025-08-01 01:31:16,326 | WARNING | pyMut.annotate.actionable_mutation | Gene does not exist for variant at index 425 in batch 2 2025-08-01 01:31:16,326 | WARNING | pyMut.annotate.actionable_mutation | Unknown oncogenicity for variant at index 425 in batch 2 2025-08-01 01:31:16,326 | WARNING | pyMut.annotate.actionable_mutation | Gene does not exist for variant at index 426 in batch 2 2025-08-01 01:31:16,327 | WARNING | pyMut.annotate.actionable_mutation | Unknown oncogenicity for variant at index 426 in batch 2 2025-08-01 01:31:16,327 | WARNING | pyMut.annotate.actionable_mutation | Gene does not exist for variant at index 427 in batch 2 2025-08-01 01:31:16,328 | WARNING | pyMut.annotate.actionable_mutation | Unknown oncogenicity for variant at index 427 in batch 2 2025-08-01 01:31:16,328 | WARNING | pyMut.annotate.actionable_mutation | Gene does not exist for variant at index 428 in batch 2 2025-08-01 01:31:16,328 | WARNING | pyMut.annotate.actionable_mutation | Unknown oncogenicity for variant at index 428 in batch 2 2025-08-01 01:31:16,328 | WARNING | pyMut.annotate.actionable_mutation | Gene does not exist for variant at index 429 in batch 2 2025-08-01 01:31:16,329 | WARNING | pyMut.annotate.actionable_mutation | Unknown oncogenicity for variant at index 429 in batch 2 2025-08-01 01:31:16,329 | WARNING | pyMut.annotate.actionable_mutation | Gene does not exist for variant at index 430 in batch 2 2025-08-01 01:31:16,329 | WARNING | pyMut.annotate.actionable_mutation | Unknown oncogenicity for variant at index 430 in batch 2 2025-08-01 01:31:16,329 | WARNING | pyMut.annotate.actionable_mutation | Gene does not exist for variant at index 431 in batch 2 2025-08-01 01:31:16,330 | WARNING | pyMut.annotate.actionable_mutation | Unknown oncogenicity for variant at index 431 in batch 2 2025-08-01 01:31:16,330 | WARNING | pyMut.annotate.actionable_mutation | Gene does not exist for variant at index 432 in batch 2 2025-08-01 01:31:16,330 | WARNING | pyMut.annotate.actionable_mutation | Unknown oncogenicity for variant at index 432 in batch 2 2025-08-01 01:31:16,331 | WARNING | pyMut.annotate.actionable_mutation | Unknown oncogenicity for variant at index 433 in batch 2 2025-08-01 01:31:16,331 | WARNING | pyMut.annotate.actionable_mutation | Gene does not exist for variant at index 434 in batch 2 2025-08-01 01:31:16,331 | WARNING | pyMut.annotate.actionable_mutation | Unknown oncogenicity for variant at index 434 in batch 2 2025-08-01 01:31:16,331 | WARNING | pyMut.annotate.actionable_mutation | Gene does not exist for variant at index 435 in batch 2 2025-08-01 01:31:16,332 | WARNING | pyMut.annotate.actionable_mutation | Unknown oncogenicity for variant at index 435 in batch 2 2025-08-01 01:31:16,332 | WARNING | pyMut.annotate.actionable_mutation | Gene does not exist for variant at index 436 in batch 2 2025-08-01 01:31:16,332 | WARNING | pyMut.annotate.actionable_mutation | Unknown oncogenicity for variant at index 436 in batch 2 2025-08-01 01:31:16,332 | WARNING | pyMut.annotate.actionable_mutation | Gene does not exist for variant at index 437 in batch 2 2025-08-01 01:31:16,333 | WARNING | pyMut.annotate.actionable_mutation | Unknown oncogenicity for variant at index 437 in batch 2 2025-08-01 01:31:16,333 | WARNING | pyMut.annotate.actionable_mutation | Gene does not exist for variant at index 438 in batch 2 2025-08-01 01:31:16,333 | WARNING | pyMut.annotate.actionable_mutation | Unknown oncogenicity for variant at index 438 in batch 2 2025-08-01 01:31:16,333 | WARNING | pyMut.annotate.actionable_mutation | Gene does not exist for variant at index 439 in batch 2 2025-08-01 01:31:16,333 | WARNING | pyMut.annotate.actionable_mutation | Unknown oncogenicity for variant at index 439 in batch 2 2025-08-01 01:31:16,334 | WARNING | pyMut.annotate.actionable_mutation | Gene does not exist for variant at index 442 in batch 2 2025-08-01 01:31:16,334 | WARNING | pyMut.annotate.actionable_mutation | Unknown oncogenicity for variant at index 442 in batch 2 2025-08-01 01:31:16,334 | WARNING | pyMut.annotate.actionable_mutation | Gene does not exist for variant at index 443 in batch 2 2025-08-01 01:31:16,334 | WARNING | pyMut.annotate.actionable_mutation | Unknown oncogenicity for variant at index 443 in batch 2 2025-08-01 01:31:16,334 | WARNING | pyMut.annotate.actionable_mutation | Gene does not exist for variant at index 444 in batch 2 2025-08-01 01:31:16,335 | WARNING | pyMut.annotate.actionable_mutation | Unknown oncogenicity for variant at index 444 in batch 2 2025-08-01 01:31:16,336 | WARNING | pyMut.annotate.actionable_mutation | Gene does not exist for variant at index 445 in batch 2 2025-08-01 01:31:16,336 | WARNING | pyMut.annotate.actionable_mutation | Unknown oncogenicity for variant at index 445 in batch 2 2025-08-01 01:31:16,336 | WARNING | pyMut.annotate.actionable_mutation | Gene does not exist for variant at index 446 in batch 2 2025-08-01 01:31:16,336 | WARNING | pyMut.annotate.actionable_mutation | Unknown oncogenicity for variant at index 446 in batch 2 2025-08-01 01:31:16,337 | WARNING | pyMut.annotate.actionable_mutation | Gene does not exist for variant at index 447 in batch 2 2025-08-01 01:31:16,337 | WARNING | pyMut.annotate.actionable_mutation | Unknown oncogenicity for variant at index 447 in batch 2 2025-08-01 01:31:16,338 | WARNING | pyMut.annotate.actionable_mutation | Gene does not exist for variant at index 448 in batch 2 2025-08-01 01:31:16,338 | WARNING | pyMut.annotate.actionable_mutation | Unknown oncogenicity for variant at index 448 in batch 2 2025-08-01 01:31:16,338 | WARNING | pyMut.annotate.actionable_mutation | Gene does not exist for variant at index 449 in batch 2 2025-08-01 01:31:16,339 | WARNING | pyMut.annotate.actionable_mutation | Unknown oncogenicity for variant at index 449 in batch 2 2025-08-01 01:31:16,339 | WARNING | pyMut.annotate.actionable_mutation | Unknown oncogenicity for variant at index 450 in batch 2 2025-08-01 01:31:16,339 | WARNING | pyMut.annotate.actionable_mutation | Gene does not exist for variant at index 451 in batch 2 2025-08-01 01:31:16,339 | WARNING | pyMut.annotate.actionable_mutation | Unknown oncogenicity for variant at index 451 in batch 2 2025-08-01 01:31:16,340 | WARNING | pyMut.annotate.actionable_mutation | Unknown oncogenicity for variant at index 452 in batch 2 2025-08-01 01:31:16,340 | WARNING | pyMut.annotate.actionable_mutation | Gene does not exist for variant at index 453 in batch 2 2025-08-01 01:31:16,340 | WARNING | pyMut.annotate.actionable_mutation | Unknown oncogenicity for variant at index 453 in batch 2 2025-08-01 01:31:16,340 | WARNING | pyMut.annotate.actionable_mutation | Gene does not exist for variant at index 454 in batch 2 2025-08-01 01:31:16,341 | WARNING | pyMut.annotate.actionable_mutation | Unknown oncogenicity for variant at index 454 in batch 2 2025-08-01 01:31:16,341 | WARNING | pyMut.annotate.actionable_mutation | Gene does not exist for variant at index 455 in batch 2 2025-08-01 01:31:16,341 | WARNING | pyMut.annotate.actionable_mutation | Unknown oncogenicity for variant at index 455 in batch 2 2025-08-01 01:31:16,341 | WARNING | pyMut.annotate.actionable_mutation | Gene does not exist for variant at index 456 in batch 2 2025-08-01 01:31:16,343 | WARNING | pyMut.annotate.actionable_mutation | Unknown oncogenicity for variant at index 456 in batch 2 2025-08-01 01:31:16,343 | WARNING | pyMut.annotate.actionable_mutation | Gene does not exist for variant at index 457 in batch 2 2025-08-01 01:31:16,343 | WARNING | pyMut.annotate.actionable_mutation | Unknown oncogenicity for variant at index 457 in batch 2 2025-08-01 01:31:16,344 | WARNING | pyMut.annotate.actionable_mutation | Gene does not exist for variant at index 458 in batch 2 2025-08-01 01:31:16,344 | WARNING | pyMut.annotate.actionable_mutation | Unknown oncogenicity for variant at index 458 in batch 2 2025-08-01 01:31:16,345 | WARNING | pyMut.annotate.actionable_mutation | Gene does not exist for variant at index 459 in batch 2 2025-08-01 01:31:16,345 | WARNING | pyMut.annotate.actionable_mutation | Unknown oncogenicity for variant at index 459 in batch 2 2025-08-01 01:31:16,345 | WARNING | pyMut.annotate.actionable_mutation | Gene does not exist for variant at index 460 in batch 2 2025-08-01 01:31:16,345 | WARNING | pyMut.annotate.actionable_mutation | Unknown oncogenicity for variant at index 460 in batch 2 2025-08-01 01:31:16,345 | WARNING | pyMut.annotate.actionable_mutation | Gene does not exist for variant at index 461 in batch 2 2025-08-01 01:31:16,346 | WARNING | pyMut.annotate.actionable_mutation | Unknown oncogenicity for variant at index 461 in batch 2 2025-08-01 01:31:16,346 | WARNING | pyMut.annotate.actionable_mutation | Gene does not exist for variant at index 462 in batch 2 2025-08-01 01:31:16,346 | WARNING | pyMut.annotate.actionable_mutation | Unknown oncogenicity for variant at index 462 in batch 2 2025-08-01 01:31:16,346 | WARNING | pyMut.annotate.actionable_mutation | Gene does not exist for variant at index 463 in batch 2 2025-08-01 01:31:16,347 | WARNING | pyMut.annotate.actionable_mutation | Unknown oncogenicity for variant at index 463 in batch 2 2025-08-01 01:31:16,347 | WARNING | pyMut.annotate.actionable_mutation | Gene does not exist for variant at index 464 in batch 2 2025-08-01 01:31:16,347 | WARNING | pyMut.annotate.actionable_mutation | Unknown oncogenicity for variant at index 464 in batch 2 2025-08-01 01:31:16,347 | WARNING | pyMut.annotate.actionable_mutation | Gene does not exist for variant at index 465 in batch 2 2025-08-01 01:31:16,347 | WARNING | pyMut.annotate.actionable_mutation | Unknown oncogenicity for variant at index 465 in batch 2 2025-08-01 01:31:16,348 | WARNING | pyMut.annotate.actionable_mutation | Unknown oncogenicity for variant at index 466 in batch 2 2025-08-01 01:31:16,348 | WARNING | pyMut.annotate.actionable_mutation | Gene does not exist for variant at index 467 in batch 2 2025-08-01 01:31:16,348 | WARNING | pyMut.annotate.actionable_mutation | Unknown oncogenicity for variant at index 467 in batch 2 2025-08-01 01:31:16,349 | WARNING | pyMut.annotate.actionable_mutation | Gene does not exist for variant at index 468 in batch 2 2025-08-01 01:31:16,349 | WARNING | pyMut.annotate.actionable_mutation | Unknown oncogenicity for variant at index 468 in batch 2 2025-08-01 01:31:16,349 | WARNING | pyMut.annotate.actionable_mutation | Gene does not exist for variant at index 469 in batch 2 2025-08-01 01:31:16,349 | WARNING | pyMut.annotate.actionable_mutation | Unknown oncogenicity for variant at index 469 in batch 2 2025-08-01 01:31:16,351 | WARNING | pyMut.annotate.actionable_mutation | Gene does not exist for variant at index 470 in batch 2 2025-08-01 01:31:16,351 | WARNING | pyMut.annotate.actionable_mutation | Unknown oncogenicity for variant at index 470 in batch 2 2025-08-01 01:31:16,351 | WARNING | pyMut.annotate.actionable_mutation | Gene does not exist for variant at index 471 in batch 2 2025-08-01 01:31:16,352 | WARNING | pyMut.annotate.actionable_mutation | Unknown oncogenicity for variant at index 471 in batch 2 2025-08-01 01:31:16,352 | WARNING | pyMut.annotate.actionable_mutation | Unknown oncogenicity for variant at index 472 in batch 2 2025-08-01 01:31:16,352 | WARNING | pyMut.annotate.actionable_mutation | Gene does not exist for variant at index 473 in batch 2 2025-08-01 01:31:16,352 | WARNING | pyMut.annotate.actionable_mutation | Unknown oncogenicity for variant at index 473 in batch 2 2025-08-01 01:31:16,353 | WARNING | pyMut.annotate.actionable_mutation | Gene does not exist for variant at index 474 in batch 2 2025-08-01 01:31:16,353 | WARNING | pyMut.annotate.actionable_mutation | Unknown oncogenicity for variant at index 474 in batch 2 2025-08-01 01:31:16,353 | WARNING | pyMut.annotate.actionable_mutation | Gene does not exist for variant at index 475 in batch 2 2025-08-01 01:31:16,354 | WARNING | pyMut.annotate.actionable_mutation | Unknown oncogenicity for variant at index 475 in batch 2 2025-08-01 01:31:16,354 | WARNING | pyMut.annotate.actionable_mutation | Gene does not exist for variant at index 476 in batch 2 2025-08-01 01:31:16,355 | WARNING | pyMut.annotate.actionable_mutation | Unknown oncogenicity for variant at index 476 in batch 2 2025-08-01 01:31:16,355 | WARNING | pyMut.annotate.actionable_mutation | Gene does not exist for variant at index 477 in batch 2 2025-08-01 01:31:16,356 | WARNING | pyMut.annotate.actionable_mutation | Unknown oncogenicity for variant at index 477 in batch 2 2025-08-01 01:31:16,356 | WARNING | pyMut.annotate.actionable_mutation | Gene does not exist for variant at index 478 in batch 2 2025-08-01 01:31:16,356 | WARNING | pyMut.annotate.actionable_mutation | Unknown oncogenicity for variant at index 478 in batch 2 2025-08-01 01:31:16,356 | WARNING | pyMut.annotate.actionable_mutation | Gene does not exist for variant at index 479 in batch 2 2025-08-01 01:31:16,356 | WARNING | pyMut.annotate.actionable_mutation | Unknown oncogenicity for variant at index 479 in batch 2 2025-08-01 01:31:16,357 | WARNING | pyMut.annotate.actionable_mutation | Gene does not exist for variant at index 480 in batch 2 2025-08-01 01:31:16,357 | WARNING | pyMut.annotate.actionable_mutation | Unknown oncogenicity for variant at index 480 in batch 2 2025-08-01 01:31:16,358 | WARNING | pyMut.annotate.actionable_mutation | Gene does not exist for variant at index 481 in batch 2 2025-08-01 01:31:16,358 | WARNING | pyMut.annotate.actionable_mutation | Unknown oncogenicity for variant at index 481 in batch 2 2025-08-01 01:31:16,358 | WARNING | pyMut.annotate.actionable_mutation | Gene does not exist for variant at index 482 in batch 2 2025-08-01 01:31:16,358 | WARNING | pyMut.annotate.actionable_mutation | Unknown oncogenicity for variant at index 482 in batch 2 2025-08-01 01:31:16,359 | WARNING | pyMut.annotate.actionable_mutation | Gene does not exist for variant at index 483 in batch 2 2025-08-01 01:31:16,359 | WARNING | pyMut.annotate.actionable_mutation | Unknown oncogenicity for variant at index 483 in batch 2 2025-08-01 01:31:16,359 | WARNING | pyMut.annotate.actionable_mutation | Gene does not exist for variant at index 484 in batch 2 2025-08-01 01:31:16,359 | WARNING | pyMut.annotate.actionable_mutation | Unknown oncogenicity for variant at index 484 in batch 2 2025-08-01 01:31:16,359 | WARNING | pyMut.annotate.actionable_mutation | Gene does not exist for variant at index 485 in batch 2 2025-08-01 01:31:16,360 | WARNING | pyMut.annotate.actionable_mutation | Unknown oncogenicity for variant at index 485 in batch 2 2025-08-01 01:31:16,360 | WARNING | pyMut.annotate.actionable_mutation | Gene does not exist for variant at index 486 in batch 2 2025-08-01 01:31:16,360 | WARNING | pyMut.annotate.actionable_mutation | Unknown oncogenicity for variant at index 486 in batch 2 2025-08-01 01:31:16,360 | WARNING | pyMut.annotate.actionable_mutation | Gene does not exist for variant at index 487 in batch 2 2025-08-01 01:31:16,360 | WARNING | pyMut.annotate.actionable_mutation | Unknown oncogenicity for variant at index 487 in batch 2 2025-08-01 01:31:16,361 | WARNING | pyMut.annotate.actionable_mutation | Gene does not exist for variant at index 488 in batch 2 2025-08-01 01:31:16,361 | WARNING | pyMut.annotate.actionable_mutation | Unknown oncogenicity for variant at index 488 in batch 2 2025-08-01 01:31:16,361 | WARNING | pyMut.annotate.actionable_mutation | Gene does not exist for variant at index 489 in batch 2 2025-08-01 01:31:16,362 | WARNING | pyMut.annotate.actionable_mutation | Unknown oncogenicity for variant at index 489 in batch 2 2025-08-01 01:31:16,362 | WARNING | pyMut.annotate.actionable_mutation | Gene does not exist for variant at index 490 in batch 2 2025-08-01 01:31:16,362 | WARNING | pyMut.annotate.actionable_mutation | Unknown oncogenicity for variant at index 490 in batch 2 2025-08-01 01:31:16,362 | WARNING | pyMut.annotate.actionable_mutation | Gene does not exist for variant at index 491 in batch 2 2025-08-01 01:31:16,363 | WARNING | pyMut.annotate.actionable_mutation | Unknown oncogenicity for variant at index 491 in batch 2 2025-08-01 01:31:16,363 | WARNING | pyMut.annotate.actionable_mutation | Gene does not exist for variant at index 492 in batch 2 2025-08-01 01:31:16,363 | WARNING | pyMut.annotate.actionable_mutation | Unknown oncogenicity for variant at index 492 in batch 2 2025-08-01 01:31:16,363 | WARNING | pyMut.annotate.actionable_mutation | Gene does not exist for variant at index 493 in batch 2 2025-08-01 01:31:16,363 | WARNING | pyMut.annotate.actionable_mutation | Unknown oncogenicity for variant at index 493 in batch 2 2025-08-01 01:31:16,364 | WARNING | pyMut.annotate.actionable_mutation | Gene does not exist for variant at index 494 in batch 2 2025-08-01 01:31:16,364 | WARNING | pyMut.annotate.actionable_mutation | Unknown oncogenicity for variant at index 494 in batch 2 2025-08-01 01:31:16,364 | WARNING | pyMut.annotate.actionable_mutation | Gene does not exist for variant at index 495 in batch 2 2025-08-01 01:31:16,364 | WARNING | pyMut.annotate.actionable_mutation | Unknown oncogenicity for variant at index 495 in batch 2 2025-08-01 01:31:16,365 | WARNING | pyMut.annotate.actionable_mutation | Gene does not exist for variant at index 496 in batch 2 2025-08-01 01:31:16,365 | WARNING | pyMut.annotate.actionable_mutation | Unknown oncogenicity for variant at index 496 in batch 2 2025-08-01 01:31:16,366 | WARNING | pyMut.annotate.actionable_mutation | Gene does not exist for variant at index 497 in batch 2 2025-08-01 01:31:16,367 | WARNING | pyMut.annotate.actionable_mutation | Unknown oncogenicity for variant at index 497 in batch 2 2025-08-01 01:31:16,367 | WARNING | pyMut.annotate.actionable_mutation | Gene does not exist for variant at index 498 in batch 2 2025-08-01 01:31:16,367 | WARNING | pyMut.annotate.actionable_mutation | Unknown oncogenicity for variant at index 498 in batch 2 2025-08-01 01:31:16,367 | WARNING | pyMut.annotate.actionable_mutation | Gene does not exist for variant at index 499 in batch 2 2025-08-01 01:31:16,368 | WARNING | pyMut.annotate.actionable_mutation | Unknown oncogenicity for variant at index 499 in batch 2 2025-08-01 01:31:16,368 | WARNING | pyMut.annotate.actionable_mutation | Gene does not exist for variant at index 500 in batch 2 2025-08-01 01:31:16,368 | WARNING | pyMut.annotate.actionable_mutation | Unknown oncogenicity for variant at index 500 in batch 2 2025-08-01 01:31:16,368 | WARNING | pyMut.annotate.actionable_mutation | Gene does not exist for variant at index 501 in batch 2 2025-08-01 01:31:16,368 | WARNING | pyMut.annotate.actionable_mutation | Unknown oncogenicity for variant at index 501 in batch 2 2025-08-01 01:31:16,369 | WARNING | pyMut.annotate.actionable_mutation | Gene does not exist for variant at index 502 in batch 2 2025-08-01 01:31:16,369 | WARNING | pyMut.annotate.actionable_mutation | Unknown oncogenicity for variant at index 502 in batch 2 2025-08-01 01:31:16,369 | WARNING | pyMut.annotate.actionable_mutation | Gene does not exist for variant at index 503 in batch 2 2025-08-01 01:31:16,369 | WARNING | pyMut.annotate.actionable_mutation | Unknown oncogenicity for variant at index 503 in batch 2 2025-08-01 01:31:16,370 | WARNING | pyMut.annotate.actionable_mutation | Gene does not exist for variant at index 504 in batch 2 2025-08-01 01:31:16,370 | WARNING | pyMut.annotate.actionable_mutation | Unknown oncogenicity for variant at index 504 in batch 2 2025-08-01 01:31:16,370 | WARNING | pyMut.annotate.actionable_mutation | Unknown oncogenicity for variant at index 505 in batch 2 2025-08-01 01:31:16,370 | WARNING | pyMut.annotate.actionable_mutation | Unknown oncogenicity for variant at index 506 in batch 2 2025-08-01 01:31:16,371 | WARNING | pyMut.annotate.actionable_mutation | Unknown oncogenicity for variant at index 507 in batch 2 2025-08-01 01:31:16,371 | WARNING | pyMut.annotate.actionable_mutation | Gene does not exist for variant at index 508 in batch 2 2025-08-01 01:31:16,371 | WARNING | pyMut.annotate.actionable_mutation | Unknown oncogenicity for variant at index 508 in batch 2 2025-08-01 01:31:16,372 | WARNING | pyMut.annotate.actionable_mutation | Gene does not exist for variant at index 509 in batch 2 2025-08-01 01:31:16,372 | WARNING | pyMut.annotate.actionable_mutation | Unknown oncogenicity for variant at index 509 in batch 2 2025-08-01 01:31:16,372 | WARNING | pyMut.annotate.actionable_mutation | Gene does not exist for variant at index 510 in batch 2 2025-08-01 01:31:16,372 | WARNING | pyMut.annotate.actionable_mutation | Unknown oncogenicity for variant at index 510 in batch 2 2025-08-01 01:31:16,373 | WARNING | pyMut.annotate.actionable_mutation | Gene does not exist for variant at index 511 in batch 2 2025-08-01 01:31:16,374 | WARNING | pyMut.annotate.actionable_mutation | Unknown oncogenicity for variant at index 511 in batch 2 2025-08-01 01:31:16,374 | WARNING | pyMut.annotate.actionable_mutation | Gene does not exist for variant at index 512 in batch 2 2025-08-01 01:31:16,374 | WARNING | pyMut.annotate.actionable_mutation | Unknown oncogenicity for variant at index 512 in batch 2 2025-08-01 01:31:16,374 | WARNING | pyMut.annotate.actionable_mutation | Gene does not exist for variant at index 513 in batch 2 2025-08-01 01:31:16,375 | WARNING | pyMut.annotate.actionable_mutation | Unknown oncogenicity for variant at index 513 in batch 2 2025-08-01 01:31:16,375 | WARNING | pyMut.annotate.actionable_mutation | Gene does not exist for variant at index 514 in batch 2 2025-08-01 01:31:16,375 | WARNING | pyMut.annotate.actionable_mutation | Unknown oncogenicity for variant at index 514 in batch 2 2025-08-01 01:31:16,375 | WARNING | pyMut.annotate.actionable_mutation | Gene does not exist for variant at index 515 in batch 2 2025-08-01 01:31:16,377 | WARNING | pyMut.annotate.actionable_mutation | Unknown oncogenicity for variant at index 515 in batch 2 2025-08-01 01:31:16,377 | WARNING | pyMut.annotate.actionable_mutation | Gene does not exist for variant at index 516 in batch 2 2025-08-01 01:31:16,377 | WARNING | pyMut.annotate.actionable_mutation | Unknown oncogenicity for variant at index 516 in batch 2 2025-08-01 01:31:16,377 | WARNING | pyMut.annotate.actionable_mutation | Gene does not exist for variant at index 517 in batch 2 2025-08-01 01:31:16,378 | WARNING | pyMut.annotate.actionable_mutation | Unknown oncogenicity for variant at index 517 in batch 2 2025-08-01 01:31:16,378 | WARNING | pyMut.annotate.actionable_mutation | Gene does not exist for variant at index 518 in batch 2 2025-08-01 01:31:16,378 | WARNING | pyMut.annotate.actionable_mutation | Unknown oncogenicity for variant at index 518 in batch 2 2025-08-01 01:31:16,378 | WARNING | pyMut.annotate.actionable_mutation | Gene does not exist for variant at index 519 in batch 2 2025-08-01 01:31:16,379 | WARNING | pyMut.annotate.actionable_mutation | Unknown oncogenicity for variant at index 519 in batch 2 2025-08-01 01:31:16,379 | WARNING | pyMut.annotate.actionable_mutation | Unknown oncogenicity for variant at index 520 in batch 2 2025-08-01 01:31:16,379 | WARNING | pyMut.annotate.actionable_mutation | Gene does not exist for variant at index 534 in batch 2 2025-08-01 01:31:16,379 | WARNING | pyMut.annotate.actionable_mutation | Unknown oncogenicity for variant at index 534 in batch 2 2025-08-01 01:31:16,380 | WARNING | pyMut.annotate.actionable_mutation | Gene does not exist for variant at index 535 in batch 2 2025-08-01 01:31:16,380 | WARNING | pyMut.annotate.actionable_mutation | Unknown oncogenicity for variant at index 535 in batch 2 2025-08-01 01:31:16,380 | WARNING | pyMut.annotate.actionable_mutation | Gene does not exist for variant at index 536 in batch 2 2025-08-01 01:31:16,380 | WARNING | pyMut.annotate.actionable_mutation | Unknown oncogenicity for variant at index 536 in batch 2 2025-08-01 01:31:16,381 | WARNING | pyMut.annotate.actionable_mutation | Gene does not exist for variant at index 537 in batch 2 2025-08-01 01:31:16,381 | WARNING | pyMut.annotate.actionable_mutation | Unknown oncogenicity for variant at index 537 in batch 2 2025-08-01 01:31:16,381 | WARNING | pyMut.annotate.actionable_mutation | Gene does not exist for variant at index 538 in batch 2 2025-08-01 01:31:16,381 | WARNING | pyMut.annotate.actionable_mutation | Unknown oncogenicity for variant at index 538 in batch 2 2025-08-01 01:31:16,381 | WARNING | pyMut.annotate.actionable_mutation | Gene does not exist for variant at index 539 in batch 2 2025-08-01 01:31:16,382 | WARNING | pyMut.annotate.actionable_mutation | Unknown oncogenicity for variant at index 539 in batch 2 2025-08-01 01:31:16,382 | WARNING | pyMut.annotate.actionable_mutation | Gene does not exist for variant at index 542 in batch 2 2025-08-01 01:31:16,384 | WARNING | pyMut.annotate.actionable_mutation | Unknown oncogenicity for variant at index 542 in batch 2 2025-08-01 01:31:16,384 | WARNING | pyMut.annotate.actionable_mutation | Gene does not exist for variant at index 543 in batch 2 2025-08-01 01:31:16,384 | WARNING | pyMut.annotate.actionable_mutation | Unknown oncogenicity for variant at index 543 in batch 2 2025-08-01 01:31:16,384 | WARNING | pyMut.annotate.actionable_mutation | Gene does not exist for variant at index 544 in batch 2 2025-08-01 01:31:16,385 | WARNING | pyMut.annotate.actionable_mutation | Unknown oncogenicity for variant at index 544 in batch 2 2025-08-01 01:31:16,385 | WARNING | pyMut.annotate.actionable_mutation | Gene does not exist for variant at index 545 in batch 2 2025-08-01 01:31:16,385 | WARNING | pyMut.annotate.actionable_mutation | Unknown oncogenicity for variant at index 545 in batch 2 2025-08-01 01:31:16,385 | WARNING | pyMut.annotate.actionable_mutation | Unknown oncogenicity for variant at index 546 in batch 2 2025-08-01 01:31:16,386 | WARNING | pyMut.annotate.actionable_mutation | Gene does not exist for variant at index 547 in batch 2 2025-08-01 01:31:16,386 | WARNING | pyMut.annotate.actionable_mutation | Unknown oncogenicity for variant at index 547 in batch 2 2025-08-01 01:31:16,386 | WARNING | pyMut.annotate.actionable_mutation | Gene does not exist for variant at index 548 in batch 2 2025-08-01 01:31:16,386 | WARNING | pyMut.annotate.actionable_mutation | Unknown oncogenicity for variant at index 548 in batch 2 2025-08-01 01:31:16,386 | WARNING | pyMut.annotate.actionable_mutation | Gene does not exist for variant at index 549 in batch 2 2025-08-01 01:31:16,387 | WARNING | pyMut.annotate.actionable_mutation | Unknown oncogenicity for variant at index 549 in batch 2 2025-08-01 01:31:16,387 | WARNING | pyMut.annotate.actionable_mutation | Gene does not exist for variant at index 550 in batch 2 2025-08-01 01:31:16,387 | WARNING | pyMut.annotate.actionable_mutation | Unknown oncogenicity for variant at index 550 in batch 2 2025-08-01 01:31:16,387 | WARNING | pyMut.annotate.actionable_mutation | Gene does not exist for variant at index 551 in batch 2 2025-08-01 01:31:16,388 | WARNING | pyMut.annotate.actionable_mutation | Unknown oncogenicity for variant at index 551 in batch 2 2025-08-01 01:31:16,388 | WARNING | pyMut.annotate.actionable_mutation | Gene does not exist for variant at index 552 in batch 2 2025-08-01 01:31:16,389 | WARNING | pyMut.annotate.actionable_mutation | Unknown oncogenicity for variant at index 552 in batch 2 2025-08-01 01:31:16,389 | WARNING | pyMut.annotate.actionable_mutation | Gene does not exist for variant at index 553 in batch 2 2025-08-01 01:31:16,390 | WARNING | pyMut.annotate.actionable_mutation | Unknown oncogenicity for variant at index 553 in batch 2 2025-08-01 01:31:16,390 | WARNING | pyMut.annotate.actionable_mutation | Gene does not exist for variant at index 554 in batch 2 2025-08-01 01:31:16,390 | WARNING | pyMut.annotate.actionable_mutation | Unknown oncogenicity for variant at index 554 in batch 2 2025-08-01 01:31:16,390 | WARNING | pyMut.annotate.actionable_mutation | Gene does not exist for variant at index 555 in batch 2 2025-08-01 01:31:16,391 | WARNING | pyMut.annotate.actionable_mutation | Unknown oncogenicity for variant at index 555 in batch 2 2025-08-01 01:31:16,391 | WARNING | pyMut.annotate.actionable_mutation | Gene does not exist for variant at index 556 in batch 2 2025-08-01 01:31:16,391 | WARNING | pyMut.annotate.actionable_mutation | Unknown oncogenicity for variant at index 556 in batch 2 2025-08-01 01:31:16,391 | WARNING | pyMut.annotate.actionable_mutation | Gene does not exist for variant at index 557 in batch 2 2025-08-01 01:31:16,392 | WARNING | pyMut.annotate.actionable_mutation | Unknown oncogenicity for variant at index 557 in batch 2 2025-08-01 01:31:16,392 | WARNING | pyMut.annotate.actionable_mutation | Gene does not exist for variant at index 558 in batch 2 2025-08-01 01:31:16,392 | WARNING | pyMut.annotate.actionable_mutation | Unknown oncogenicity for variant at index 558 in batch 2 2025-08-01 01:31:16,392 | WARNING | pyMut.annotate.actionable_mutation | Gene does not exist for variant at index 559 in batch 2 2025-08-01 01:31:16,392 | WARNING | pyMut.annotate.actionable_mutation | Unknown oncogenicity for variant at index 559 in batch 2 2025-08-01 01:31:16,393 | WARNING | pyMut.annotate.actionable_mutation | Gene does not exist for variant at index 560 in batch 2 2025-08-01 01:31:16,393 | WARNING | pyMut.annotate.actionable_mutation | Unknown oncogenicity for variant at index 560 in batch 2 2025-08-01 01:31:16,393 | WARNING | pyMut.annotate.actionable_mutation | Gene does not exist for variant at index 561 in batch 2 2025-08-01 01:31:16,393 | WARNING | pyMut.annotate.actionable_mutation | Unknown oncogenicity for variant at index 561 in batch 2 2025-08-01 01:31:16,394 | WARNING | pyMut.annotate.actionable_mutation | Gene does not exist for variant at index 562 in batch 2 2025-08-01 01:31:16,394 | WARNING | pyMut.annotate.actionable_mutation | Unknown oncogenicity for variant at index 562 in batch 2 2025-08-01 01:31:16,395 | WARNING | pyMut.annotate.actionable_mutation | Gene does not exist for variant at index 563 in batch 2 2025-08-01 01:31:16,395 | WARNING | pyMut.annotate.actionable_mutation | Unknown oncogenicity for variant at index 563 in batch 2 2025-08-01 01:31:16,396 | WARNING | pyMut.annotate.actionable_mutation | Gene does not exist for variant at index 564 in batch 2 2025-08-01 01:31:16,396 | WARNING | pyMut.annotate.actionable_mutation | Unknown oncogenicity for variant at index 564 in batch 2 2025-08-01 01:31:16,396 | WARNING | pyMut.annotate.actionable_mutation | Gene does not exist for variant at index 565 in batch 2 2025-08-01 01:31:16,397 | WARNING | pyMut.annotate.actionable_mutation | Unknown oncogenicity for variant at index 565 in batch 2 2025-08-01 01:31:16,397 | WARNING | pyMut.annotate.actionable_mutation | Unknown oncogenicity for variant at index 566 in batch 2 2025-08-01 01:31:16,397 | WARNING | pyMut.annotate.actionable_mutation | Gene does not exist for variant at index 567 in batch 2 2025-08-01 01:31:16,398 | WARNING | pyMut.annotate.actionable_mutation | Unknown oncogenicity for variant at index 567 in batch 2 2025-08-01 01:31:16,398 | WARNING | pyMut.annotate.actionable_mutation | Gene does not exist for variant at index 568 in batch 2 2025-08-01 01:31:16,398 | WARNING | pyMut.annotate.actionable_mutation | Unknown oncogenicity for variant at index 568 in batch 2 2025-08-01 01:31:16,398 | WARNING | pyMut.annotate.actionable_mutation | Gene does not exist for variant at index 569 in batch 2 2025-08-01 01:31:16,399 | WARNING | pyMut.annotate.actionable_mutation | Unknown oncogenicity for variant at index 569 in batch 2 2025-08-01 01:31:16,399 | WARNING | pyMut.annotate.actionable_mutation | Gene does not exist for variant at index 570 in batch 2 2025-08-01 01:31:16,399 | WARNING | pyMut.annotate.actionable_mutation | Unknown oncogenicity for variant at index 570 in batch 2 2025-08-01 01:31:16,400 | WARNING | pyMut.annotate.actionable_mutation | Gene does not exist for variant at index 571 in batch 2 2025-08-01 01:31:16,400 | WARNING | pyMut.annotate.actionable_mutation | Unknown oncogenicity for variant at index 571 in batch 2 2025-08-01 01:31:16,401 | WARNING | pyMut.annotate.actionable_mutation | Gene does not exist for variant at index 572 in batch 2 2025-08-01 01:31:16,401 | WARNING | pyMut.annotate.actionable_mutation | Unknown oncogenicity for variant at index 572 in batch 2 2025-08-01 01:31:16,401 | WARNING | pyMut.annotate.actionable_mutation | Gene does not exist for variant at index 573 in batch 2 2025-08-01 01:31:16,402 | WARNING | pyMut.annotate.actionable_mutation | Unknown oncogenicity for variant at index 573 in batch 2 2025-08-01 01:31:16,402 | WARNING | pyMut.annotate.actionable_mutation | Gene does not exist for variant at index 574 in batch 2 2025-08-01 01:31:16,402 | WARNING | pyMut.annotate.actionable_mutation | Unknown oncogenicity for variant at index 574 in batch 2 2025-08-01 01:31:16,402 | WARNING | pyMut.annotate.actionable_mutation | Gene does not exist for variant at index 575 in batch 2 2025-08-01 01:31:16,403 | WARNING | pyMut.annotate.actionable_mutation | Unknown oncogenicity for variant at index 575 in batch 2 2025-08-01 01:31:16,403 | WARNING | pyMut.annotate.actionable_mutation | Gene does not exist for variant at index 576 in batch 2 2025-08-01 01:31:16,403 | WARNING | pyMut.annotate.actionable_mutation | Unknown oncogenicity for variant at index 576 in batch 2 2025-08-01 01:31:16,404 | WARNING | pyMut.annotate.actionable_mutation | Gene does not exist for variant at index 577 in batch 2 2025-08-01 01:31:16,405 | WARNING | pyMut.annotate.actionable_mutation | Unknown oncogenicity for variant at index 577 in batch 2 2025-08-01 01:31:16,406 | WARNING | pyMut.annotate.actionable_mutation | Gene does not exist for variant at index 578 in batch 2 2025-08-01 01:31:16,406 | WARNING | pyMut.annotate.actionable_mutation | Unknown oncogenicity for variant at index 578 in batch 2 2025-08-01 01:31:16,406 | WARNING | pyMut.annotate.actionable_mutation | Gene does not exist for variant at index 579 in batch 2 2025-08-01 01:31:16,407 | WARNING | pyMut.annotate.actionable_mutation | Unknown oncogenicity for variant at index 579 in batch 2 2025-08-01 01:31:16,407 | WARNING | pyMut.annotate.actionable_mutation | Gene does not exist for variant at index 580 in batch 2 2025-08-01 01:31:16,407 | WARNING | pyMut.annotate.actionable_mutation | Unknown oncogenicity for variant at index 580 in batch 2 2025-08-01 01:31:16,407 | WARNING | pyMut.annotate.actionable_mutation | Gene does not exist for variant at index 581 in batch 2 2025-08-01 01:31:16,408 | WARNING | pyMut.annotate.actionable_mutation | Unknown oncogenicity for variant at index 581 in batch 2 2025-08-01 01:31:16,409 | WARNING | pyMut.annotate.actionable_mutation | Gene does not exist for variant at index 582 in batch 2 2025-08-01 01:31:16,409 | WARNING | pyMut.annotate.actionable_mutation | Unknown oncogenicity for variant at index 582 in batch 2 2025-08-01 01:31:16,409 | WARNING | pyMut.annotate.actionable_mutation | Gene does not exist for variant at index 583 in batch 2 2025-08-01 01:31:16,410 | WARNING | pyMut.annotate.actionable_mutation | Unknown oncogenicity for variant at index 583 in batch 2 2025-08-01 01:31:16,410 | WARNING | pyMut.annotate.actionable_mutation | Gene does not exist for variant at index 589 in batch 2 2025-08-01 01:31:16,410 | WARNING | pyMut.annotate.actionable_mutation | Unknown oncogenicity for variant at index 589 in batch 2 2025-08-01 01:31:16,411 | WARNING | pyMut.annotate.actionable_mutation | Gene does not exist for variant at index 591 in batch 2 2025-08-01 01:31:16,411 | WARNING | pyMut.annotate.actionable_mutation | Unknown oncogenicity for variant at index 591 in batch 2 2025-08-01 01:31:16,411 | WARNING | pyMut.annotate.actionable_mutation | Gene does not exist for variant at index 592 in batch 2 2025-08-01 01:31:16,412 | WARNING | pyMut.annotate.actionable_mutation | Unknown oncogenicity for variant at index 592 in batch 2 2025-08-01 01:31:16,412 | WARNING | pyMut.annotate.actionable_mutation | Gene does not exist for variant at index 593 in batch 2 2025-08-01 01:31:16,412 | WARNING | pyMut.annotate.actionable_mutation | Unknown oncogenicity for variant at index 593 in batch 2 2025-08-01 01:31:16,413 | WARNING | pyMut.annotate.actionable_mutation | Gene does not exist for variant at index 594 in batch 2 2025-08-01 01:31:16,413 | WARNING | pyMut.annotate.actionable_mutation | Unknown oncogenicity for variant at index 594 in batch 2 2025-08-01 01:31:16,413 | WARNING | pyMut.annotate.actionable_mutation | Gene does not exist for variant at index 595 in batch 2 2025-08-01 01:31:16,413 | WARNING | pyMut.annotate.actionable_mutation | Unknown oncogenicity for variant at index 595 in batch 2 2025-08-01 01:31:16,414 | WARNING | pyMut.annotate.actionable_mutation | Gene does not exist for variant at index 596 in batch 2 2025-08-01 01:31:16,414 | WARNING | pyMut.annotate.actionable_mutation | Unknown oncogenicity for variant at index 596 in batch 2 2025-08-01 01:31:16,414 | WARNING | pyMut.annotate.actionable_mutation | Gene does not exist for variant at index 597 in batch 2 2025-08-01 01:31:16,414 | WARNING | pyMut.annotate.actionable_mutation | Unknown oncogenicity for variant at index 597 in batch 2 2025-08-01 01:31:16,415 | WARNING | pyMut.annotate.actionable_mutation | Gene does not exist for variant at index 598 in batch 2 2025-08-01 01:31:16,415 | WARNING | pyMut.annotate.actionable_mutation | Unknown oncogenicity for variant at index 598 in batch 2 2025-08-01 01:31:16,415 | WARNING | pyMut.annotate.actionable_mutation | Gene does not exist for variant at index 599 in batch 2 2025-08-01 01:31:16,415 | WARNING | pyMut.annotate.actionable_mutation | Unknown oncogenicity for variant at index 599 in batch 2 2025-08-01 01:31:16,416 | WARNING | pyMut.annotate.actionable_mutation | Gene does not exist for variant at index 600 in batch 2 2025-08-01 01:31:16,416 | WARNING | pyMut.annotate.actionable_mutation | Unknown oncogenicity for variant at index 600 in batch 2 2025-08-01 01:31:16,416 | WARNING | pyMut.annotate.actionable_mutation | Gene does not exist for variant at index 601 in batch 2 2025-08-01 01:31:16,416 | WARNING | pyMut.annotate.actionable_mutation | Unknown oncogenicity for variant at index 601 in batch 2 2025-08-01 01:31:16,417 | WARNING | pyMut.annotate.actionable_mutation | Gene does not exist for variant at index 602 in batch 2 2025-08-01 01:31:16,417 | WARNING | pyMut.annotate.actionable_mutation | Unknown oncogenicity for variant at index 602 in batch 2 2025-08-01 01:31:16,417 | WARNING | pyMut.annotate.actionable_mutation | Unknown oncogenicity for variant at index 603 in batch 2 2025-08-01 01:31:16,417 | WARNING | pyMut.annotate.actionable_mutation | Gene does not exist for variant at index 604 in batch 2 2025-08-01 01:31:16,418 | WARNING | pyMut.annotate.actionable_mutation | Unknown oncogenicity for variant at index 604 in batch 2 2025-08-01 01:31:16,420 | WARNING | pyMut.annotate.actionable_mutation | Gene does not exist for variant at index 605 in batch 2 2025-08-01 01:31:16,421 | WARNING | pyMut.annotate.actionable_mutation | Unknown oncogenicity for variant at index 605 in batch 2 2025-08-01 01:31:16,421 | WARNING | pyMut.annotate.actionable_mutation | Gene does not exist for variant at index 606 in batch 2 2025-08-01 01:31:16,421 | WARNING | pyMut.annotate.actionable_mutation | Unknown oncogenicity for variant at index 606 in batch 2 2025-08-01 01:31:16,422 | WARNING | pyMut.annotate.actionable_mutation | Gene does not exist for variant at index 607 in batch 2 2025-08-01 01:31:16,422 | WARNING | pyMut.annotate.actionable_mutation | Unknown oncogenicity for variant at index 607 in batch 2 2025-08-01 01:31:16,422 | WARNING | pyMut.annotate.actionable_mutation | Gene does not exist for variant at index 608 in batch 2 2025-08-01 01:31:16,422 | WARNING | pyMut.annotate.actionable_mutation | Unknown oncogenicity for variant at index 608 in batch 2 2025-08-01 01:31:16,423 | WARNING | pyMut.annotate.actionable_mutation | Gene does not exist for variant at index 609 in batch 2 2025-08-01 01:31:16,424 | WARNING | pyMut.annotate.actionable_mutation | Unknown oncogenicity for variant at index 609 in batch 2 2025-08-01 01:31:16,424 | WARNING | pyMut.annotate.actionable_mutation | Gene does not exist for variant at index 610 in batch 2 2025-08-01 01:31:16,424 | WARNING | pyMut.annotate.actionable_mutation | Unknown oncogenicity for variant at index 610 in batch 2 2025-08-01 01:31:16,424 | WARNING | pyMut.annotate.actionable_mutation | Gene does not exist for variant at index 611 in batch 2 2025-08-01 01:31:16,424 | WARNING | pyMut.annotate.actionable_mutation | Unknown oncogenicity for variant at index 611 in batch 2 2025-08-01 01:31:16,425 | WARNING | pyMut.annotate.actionable_mutation | Gene does not exist for variant at index 612 in batch 2 2025-08-01 01:31:16,425 | WARNING | pyMut.annotate.actionable_mutation | Unknown oncogenicity for variant at index 612 in batch 2 2025-08-01 01:31:16,425 | WARNING | pyMut.annotate.actionable_mutation | Gene does not exist for variant at index 613 in batch 2 2025-08-01 01:31:16,425 | WARNING | pyMut.annotate.actionable_mutation | Unknown oncogenicity for variant at index 613 in batch 2 2025-08-01 01:31:16,426 | WARNING | pyMut.annotate.actionable_mutation | Gene does not exist for variant at index 614 in batch 2 2025-08-01 01:31:16,426 | WARNING | pyMut.annotate.actionable_mutation | Unknown oncogenicity for variant at index 614 in batch 2 2025-08-01 01:31:16,427 | WARNING | pyMut.annotate.actionable_mutation | Gene does not exist for variant at index 615 in batch 2 2025-08-01 01:31:16,427 | WARNING | pyMut.annotate.actionable_mutation | Unknown oncogenicity for variant at index 615 in batch 2 2025-08-01 01:31:16,427 | WARNING | pyMut.annotate.actionable_mutation | Gene does not exist for variant at index 616 in batch 2 2025-08-01 01:31:16,427 | WARNING | pyMut.annotate.actionable_mutation | Unknown oncogenicity for variant at index 616 in batch 2 2025-08-01 01:31:16,428 | WARNING | pyMut.annotate.actionable_mutation | Unknown oncogenicity for variant at index 617 in batch 2 2025-08-01 01:31:16,428 | WARNING | pyMut.annotate.actionable_mutation | Gene does not exist for variant at index 618 in batch 2 2025-08-01 01:31:16,428 | WARNING | pyMut.annotate.actionable_mutation | Unknown oncogenicity for variant at index 618 in batch 2 2025-08-01 01:31:16,429 | WARNING | pyMut.annotate.actionable_mutation | Gene does not exist for variant at index 619 in batch 2 2025-08-01 01:31:16,429 | WARNING | pyMut.annotate.actionable_mutation | Unknown oncogenicity for variant at index 619 in batch 2 2025-08-01 01:31:16,429 | WARNING | pyMut.annotate.actionable_mutation | Gene does not exist for variant at index 620 in batch 2 2025-08-01 01:31:16,429 | WARNING | pyMut.annotate.actionable_mutation | Unknown oncogenicity for variant at index 620 in batch 2 2025-08-01 01:31:16,429 | WARNING | pyMut.annotate.actionable_mutation | Gene does not exist for variant at index 621 in batch 2 2025-08-01 01:31:16,430 | WARNING | pyMut.annotate.actionable_mutation | Unknown oncogenicity for variant at index 621 in batch 2 2025-08-01 01:31:16,430 | WARNING | pyMut.annotate.actionable_mutation | Gene does not exist for variant at index 622 in batch 2 2025-08-01 01:31:16,430 | WARNING | pyMut.annotate.actionable_mutation | Unknown oncogenicity for variant at index 622 in batch 2 2025-08-01 01:31:16,431 | WARNING | pyMut.annotate.actionable_mutation | Unknown oncogenicity for variant at index 623 in batch 2 2025-08-01 01:31:16,431 | WARNING | pyMut.annotate.actionable_mutation | Gene does not exist for variant at index 624 in batch 2 2025-08-01 01:31:16,431 | WARNING | pyMut.annotate.actionable_mutation | Unknown oncogenicity for variant at index 624 in batch 2 2025-08-01 01:31:16,431 | WARNING | pyMut.annotate.actionable_mutation | Gene does not exist for variant at index 625 in batch 2 2025-08-01 01:31:16,432 | WARNING | pyMut.annotate.actionable_mutation | Unknown oncogenicity for variant at index 625 in batch 2 2025-08-01 01:31:16,432 | WARNING | pyMut.annotate.actionable_mutation | Gene does not exist for variant at index 626 in batch 2 2025-08-01 01:31:16,432 | WARNING | pyMut.annotate.actionable_mutation | Unknown oncogenicity for variant at index 626 in batch 2 2025-08-01 01:31:16,432 | WARNING | pyMut.annotate.actionable_mutation | Gene does not exist for variant at index 627 in batch 2 2025-08-01 01:31:16,432 | WARNING | pyMut.annotate.actionable_mutation | Unknown oncogenicity for variant at index 627 in batch 2 2025-08-01 01:31:16,433 | WARNING | pyMut.annotate.actionable_mutation | Gene does not exist for variant at index 628 in batch 2 2025-08-01 01:31:16,433 | WARNING | pyMut.annotate.actionable_mutation | Unknown oncogenicity for variant at index 628 in batch 2 2025-08-01 01:31:16,433 | WARNING | pyMut.annotate.actionable_mutation | Gene does not exist for variant at index 629 in batch 2 2025-08-01 01:31:16,433 | WARNING | pyMut.annotate.actionable_mutation | Unknown oncogenicity for variant at index 629 in batch 2 2025-08-01 01:31:16,433 | WARNING | pyMut.annotate.actionable_mutation | Unknown oncogenicity for variant at index 630 in batch 2 2025-08-01 01:31:16,434 | WARNING | pyMut.annotate.actionable_mutation | Gene does not exist for variant at index 631 in batch 2 2025-08-01 01:31:16,434 | WARNING | pyMut.annotate.actionable_mutation | Unknown oncogenicity for variant at index 631 in batch 2 2025-08-01 01:31:16,434 | WARNING | pyMut.annotate.actionable_mutation | Gene does not exist for variant at index 632 in batch 2 2025-08-01 01:31:16,434 | WARNING | pyMut.annotate.actionable_mutation | Unknown oncogenicity for variant at index 632 in batch 2 2025-08-01 01:31:16,435 | WARNING | pyMut.annotate.actionable_mutation | Gene does not exist for variant at index 633 in batch 2 2025-08-01 01:31:16,435 | WARNING | pyMut.annotate.actionable_mutation | Unknown oncogenicity for variant at index 633 in batch 2 2025-08-01 01:31:16,436 | WARNING | pyMut.annotate.actionable_mutation | Gene does not exist for variant at index 634 in batch 2 2025-08-01 01:31:16,436 | WARNING | pyMut.annotate.actionable_mutation | Unknown oncogenicity for variant at index 634 in batch 2 2025-08-01 01:31:16,436 | WARNING | pyMut.annotate.actionable_mutation | Gene does not exist for variant at index 635 in batch 2 2025-08-01 01:31:16,436 | WARNING | pyMut.annotate.actionable_mutation | Unknown oncogenicity for variant at index 635 in batch 2 2025-08-01 01:31:16,437 | WARNING | pyMut.annotate.actionable_mutation | Gene does not exist for variant at index 636 in batch 2 2025-08-01 01:31:16,437 | WARNING | pyMut.annotate.actionable_mutation | Unknown oncogenicity for variant at index 636 in batch 2 2025-08-01 01:31:16,437 | WARNING | pyMut.annotate.actionable_mutation | Gene does not exist for variant at index 637 in batch 2 2025-08-01 01:31:16,438 | WARNING | pyMut.annotate.actionable_mutation | Unknown oncogenicity for variant at index 637 in batch 2 2025-08-01 01:31:16,438 | WARNING | pyMut.annotate.actionable_mutation | Gene does not exist for variant at index 638 in batch 2 2025-08-01 01:31:16,438 | WARNING | pyMut.annotate.actionable_mutation | Unknown oncogenicity for variant at index 638 in batch 2 2025-08-01 01:31:16,438 | WARNING | pyMut.annotate.actionable_mutation | Gene does not exist for variant at index 639 in batch 2 2025-08-01 01:31:16,439 | WARNING | pyMut.annotate.actionable_mutation | Unknown oncogenicity for variant at index 639 in batch 2 2025-08-01 01:31:16,439 | WARNING | pyMut.annotate.actionable_mutation | Gene does not exist for variant at index 640 in batch 2 2025-08-01 01:31:16,439 | WARNING | pyMut.annotate.actionable_mutation | Unknown oncogenicity for variant at index 640 in batch 2 2025-08-01 01:31:16,439 | WARNING | pyMut.annotate.actionable_mutation | Gene does not exist for variant at index 641 in batch 2 2025-08-01 01:31:16,439 | WARNING | pyMut.annotate.actionable_mutation | Unknown oncogenicity for variant at index 641 in batch 2 2025-08-01 01:31:16,440 | WARNING | pyMut.annotate.actionable_mutation | Gene does not exist for variant at index 642 in batch 2 2025-08-01 01:31:16,440 | WARNING | pyMut.annotate.actionable_mutation | Unknown oncogenicity for variant at index 642 in batch 2 2025-08-01 01:31:16,440 | WARNING | pyMut.annotate.actionable_mutation | Gene does not exist for variant at index 643 in batch 2 2025-08-01 01:31:16,442 | WARNING | pyMut.annotate.actionable_mutation | Unknown oncogenicity for variant at index 643 in batch 2 2025-08-01 01:31:16,442 | WARNING | pyMut.annotate.actionable_mutation | Gene does not exist for variant at index 644 in batch 2 2025-08-01 01:31:16,442 | WARNING | pyMut.annotate.actionable_mutation | Unknown oncogenicity for variant at index 644 in batch 2 2025-08-01 01:31:16,443 | WARNING | pyMut.annotate.actionable_mutation | Gene does not exist for variant at index 645 in batch 2 2025-08-01 01:31:16,443 | WARNING | pyMut.annotate.actionable_mutation | Unknown oncogenicity for variant at index 645 in batch 2 2025-08-01 01:31:16,443 | WARNING | pyMut.annotate.actionable_mutation | Unknown oncogenicity for variant at index 646 in batch 2 2025-08-01 01:31:16,443 | WARNING | pyMut.annotate.actionable_mutation | Unknown oncogenicity for variant at index 647 in batch 2 2025-08-01 01:31:16,444 | WARNING | pyMut.annotate.actionable_mutation | Gene does not exist for variant at index 648 in batch 2 2025-08-01 01:31:16,444 | WARNING | pyMut.annotate.actionable_mutation | Unknown oncogenicity for variant at index 648 in batch 2 2025-08-01 01:31:16,444 | WARNING | pyMut.annotate.actionable_mutation | Gene does not exist for variant at index 649 in batch 2 2025-08-01 01:31:16,445 | WARNING | pyMut.annotate.actionable_mutation | Unknown oncogenicity for variant at index 649 in batch 2 2025-08-01 01:31:16,445 | WARNING | pyMut.annotate.actionable_mutation | Gene does not exist for variant at index 650 in batch 2 2025-08-01 01:31:16,445 | WARNING | pyMut.annotate.actionable_mutation | Unknown oncogenicity for variant at index 650 in batch 2 2025-08-01 01:31:16,445 | WARNING | pyMut.annotate.actionable_mutation | Gene does not exist for variant at index 651 in batch 2 2025-08-01 01:31:16,445 | WARNING | pyMut.annotate.actionable_mutation | Unknown oncogenicity for variant at index 651 in batch 2 2025-08-01 01:31:16,446 | WARNING | pyMut.annotate.actionable_mutation | Gene does not exist for variant at index 652 in batch 2 2025-08-01 01:31:16,446 | WARNING | pyMut.annotate.actionable_mutation | Unknown oncogenicity for variant at index 652 in batch 2 2025-08-01 01:31:16,446 | WARNING | pyMut.annotate.actionable_mutation | Gene does not exist for variant at index 653 in batch 2 2025-08-01 01:31:16,446 | WARNING | pyMut.annotate.actionable_mutation | Unknown oncogenicity for variant at index 653 in batch 2 2025-08-01 01:31:16,446 | WARNING | pyMut.annotate.actionable_mutation | Gene does not exist for variant at index 654 in batch 2 2025-08-01 01:31:16,447 | WARNING | pyMut.annotate.actionable_mutation | Unknown oncogenicity for variant at index 654 in batch 2 2025-08-01 01:31:16,447 | WARNING | pyMut.annotate.actionable_mutation | Gene does not exist for variant at index 655 in batch 2 2025-08-01 01:31:16,447 | WARNING | pyMut.annotate.actionable_mutation | Unknown oncogenicity for variant at index 655 in batch 2 2025-08-01 01:31:16,448 | WARNING | pyMut.annotate.actionable_mutation | Gene does not exist for variant at index 656 in batch 2 2025-08-01 01:31:16,448 | WARNING | pyMut.annotate.actionable_mutation | Unknown oncogenicity for variant at index 656 in batch 2 2025-08-01 01:31:16,448 | WARNING | pyMut.annotate.actionable_mutation | Gene does not exist for variant at index 657 in batch 2 2025-08-01 01:31:16,448 | WARNING | pyMut.annotate.actionable_mutation | Unknown oncogenicity for variant at index 657 in batch 2 2025-08-01 01:31:16,448 | WARNING | pyMut.annotate.actionable_mutation | Gene does not exist for variant at index 658 in batch 2 2025-08-01 01:31:16,449 | WARNING | pyMut.annotate.actionable_mutation | Unknown oncogenicity for variant at index 658 in batch 2 2025-08-01 01:31:16,449 | WARNING | pyMut.annotate.actionable_mutation | Gene does not exist for variant at index 659 in batch 2 2025-08-01 01:31:16,449 | WARNING | pyMut.annotate.actionable_mutation | Unknown oncogenicity for variant at index 659 in batch 2 2025-08-01 01:31:16,450 | WARNING | pyMut.annotate.actionable_mutation | Gene does not exist for variant at index 660 in batch 2 2025-08-01 01:31:16,450 | WARNING | pyMut.annotate.actionable_mutation | Unknown oncogenicity for variant at index 660 in batch 2 2025-08-01 01:31:16,450 | WARNING | pyMut.annotate.actionable_mutation | Gene does not exist for variant at index 661 in batch 2 2025-08-01 01:31:16,450 | WARNING | pyMut.annotate.actionable_mutation | Unknown oncogenicity for variant at index 661 in batch 2 2025-08-01 01:31:16,451 | WARNING | pyMut.annotate.actionable_mutation | Gene does not exist for variant at index 662 in batch 2 2025-08-01 01:31:16,451 | WARNING | pyMut.annotate.actionable_mutation | Unknown oncogenicity for variant at index 662 in batch 2 2025-08-01 01:31:16,451 | WARNING | pyMut.annotate.actionable_mutation | Unknown oncogenicity for variant at index 668 in batch 2 2025-08-01 01:31:16,451 | WARNING | pyMut.annotate.actionable_mutation | Unknown oncogenicity for variant at index 677 in batch 2 2025-08-01 01:31:16,452 | WARNING | pyMut.annotate.actionable_mutation | Unknown oncogenicity for variant at index 678 in batch 2 2025-08-01 01:31:16,452 | WARNING | pyMut.annotate.actionable_mutation | Unknown oncogenicity for variant at index 683 in batch 2 2025-08-01 01:31:16,452 | WARNING | pyMut.annotate.actionable_mutation | Unknown oncogenicity for variant at index 685 in batch 2 2025-08-01 01:31:16,452 | WARNING | pyMut.annotate.actionable_mutation | Unknown oncogenicity for variant at index 689 in batch 2 2025-08-01 01:31:16,476 | INFO | pyMut.annotate.actionable_mutation | Sleeping for 1 second before processing next batch 2025-08-01 01:31:17,478 | INFO | pyMut.annotate.actionable_mutation | Processing batch 3/3 with 697 variants 2025-08-01 01:31:17,508 | INFO | pyMut.annotate.actionable_mutation | Sending batch 3/3 to OncoKB API 2025-08-01 01:31:17,508 | INFO | root | API Request URL: https://www.oncokb.org/api/v1/annotate/mutations/byGenomicChange 2025-08-01 01:31:18,556 | INFO | root | API Response Status Code: 200 2025-08-01 01:31:18,566 | INFO | pyMut.annotate.actionable_mutation | Batch 3/3 processed successfully 2025-08-01 01:31:18,566 | WARNING | pyMut.annotate.actionable_mutation | Unknown oncogenicity for variant at index 3 in batch 3 2025-08-01 01:31:18,567 | WARNING | pyMut.annotate.actionable_mutation | Unknown oncogenicity for variant at index 4 in batch 3 2025-08-01 01:31:18,568 | WARNING | pyMut.annotate.actionable_mutation | Unknown oncogenicity for variant at index 5 in batch 3 2025-08-01 01:31:18,568 | WARNING | pyMut.annotate.actionable_mutation | Gene does not exist for variant at index 6 in batch 3 2025-08-01 01:31:18,568 | WARNING | pyMut.annotate.actionable_mutation | Unknown oncogenicity for variant at index 6 in batch 3 2025-08-01 01:31:18,568 | WARNING | pyMut.annotate.actionable_mutation | Gene does not exist for variant at index 7 in batch 3 2025-08-01 01:31:18,569 | WARNING | pyMut.annotate.actionable_mutation | Unknown oncogenicity for variant at index 7 in batch 3 2025-08-01 01:31:18,569 | WARNING | pyMut.annotate.actionable_mutation | Unknown oncogenicity for variant at index 8 in batch 3 2025-08-01 01:31:18,569 | WARNING | pyMut.annotate.actionable_mutation | Gene does not exist for variant at index 9 in batch 3 2025-08-01 01:31:18,569 | WARNING | pyMut.annotate.actionable_mutation | Unknown oncogenicity for variant at index 9 in batch 3 2025-08-01 01:31:18,570 | WARNING | pyMut.annotate.actionable_mutation | Gene does not exist for variant at index 10 in batch 3 2025-08-01 01:31:18,570 | WARNING | pyMut.annotate.actionable_mutation | Unknown oncogenicity for variant at index 10 in batch 3 2025-08-01 01:31:18,570 | WARNING | pyMut.annotate.actionable_mutation | Gene does not exist for variant at index 11 in batch 3 2025-08-01 01:31:18,570 | WARNING | pyMut.annotate.actionable_mutation | Unknown oncogenicity for variant at index 11 in batch 3 2025-08-01 01:31:18,571 | WARNING | pyMut.annotate.actionable_mutation | Gene does not exist for variant at index 12 in batch 3 2025-08-01 01:31:18,571 | WARNING | pyMut.annotate.actionable_mutation | Unknown oncogenicity for variant at index 12 in batch 3 2025-08-01 01:31:18,571 | WARNING | pyMut.annotate.actionable_mutation | Gene does not exist for variant at index 13 in batch 3 2025-08-01 01:31:18,571 | WARNING | pyMut.annotate.actionable_mutation | Unknown oncogenicity for variant at index 13 in batch 3 2025-08-01 01:31:18,572 | WARNING | pyMut.annotate.actionable_mutation | Gene does not exist for variant at index 14 in batch 3 2025-08-01 01:31:18,572 | WARNING | pyMut.annotate.actionable_mutation | Unknown oncogenicity for variant at index 14 in batch 3 2025-08-01 01:31:18,573 | WARNING | pyMut.annotate.actionable_mutation | Gene does not exist for variant at index 15 in batch 3 2025-08-01 01:31:18,573 | WARNING | pyMut.annotate.actionable_mutation | Unknown oncogenicity for variant at index 15 in batch 3 2025-08-01 01:31:18,573 | WARNING | pyMut.annotate.actionable_mutation | Gene does not exist for variant at index 16 in batch 3 2025-08-01 01:31:18,573 | WARNING | pyMut.annotate.actionable_mutation | Unknown oncogenicity for variant at index 16 in batch 3 2025-08-01 01:31:18,574 | WARNING | pyMut.annotate.actionable_mutation | Gene does not exist for variant at index 17 in batch 3 2025-08-01 01:31:18,574 | WARNING | pyMut.annotate.actionable_mutation | Unknown oncogenicity for variant at index 17 in batch 3 2025-08-01 01:31:18,574 | WARNING | pyMut.annotate.actionable_mutation | Gene does not exist for variant at index 18 in batch 3 2025-08-01 01:31:18,574 | WARNING | pyMut.annotate.actionable_mutation | Unknown oncogenicity for variant at index 18 in batch 3 2025-08-01 01:31:18,575 | WARNING | pyMut.annotate.actionable_mutation | Gene does not exist for variant at index 19 in batch 3 2025-08-01 01:31:18,575 | WARNING | pyMut.annotate.actionable_mutation | Unknown oncogenicity for variant at index 19 in batch 3 2025-08-01 01:31:18,575 | WARNING | pyMut.annotate.actionable_mutation | Unknown oncogenicity for variant at index 20 in batch 3 2025-08-01 01:31:18,576 | WARNING | pyMut.annotate.actionable_mutation | Unknown oncogenicity for variant at index 21 in batch 3 2025-08-01 01:31:18,576 | WARNING | pyMut.annotate.actionable_mutation | Gene does not exist for variant at index 23 in batch 3 2025-08-01 01:31:18,576 | WARNING | pyMut.annotate.actionable_mutation | Unknown oncogenicity for variant at index 23 in batch 3 2025-08-01 01:31:18,576 | WARNING | pyMut.annotate.actionable_mutation | Gene does not exist for variant at index 24 in batch 3 2025-08-01 01:31:18,576 | WARNING | pyMut.annotate.actionable_mutation | Unknown oncogenicity for variant at index 24 in batch 3 2025-08-01 01:31:18,577 | WARNING | pyMut.annotate.actionable_mutation | Gene does not exist for variant at index 25 in batch 3 2025-08-01 01:31:18,577 | WARNING | pyMut.annotate.actionable_mutation | Unknown oncogenicity for variant at index 25 in batch 3 2025-08-01 01:31:18,577 | WARNING | pyMut.annotate.actionable_mutation | Gene does not exist for variant at index 26 in batch 3 2025-08-01 01:31:18,577 | WARNING | pyMut.annotate.actionable_mutation | Unknown oncogenicity for variant at index 26 in batch 3 2025-08-01 01:31:18,578 | WARNING | pyMut.annotate.actionable_mutation | Gene does not exist for variant at index 27 in batch 3 2025-08-01 01:31:18,578 | WARNING | pyMut.annotate.actionable_mutation | Unknown oncogenicity for variant at index 27 in batch 3 2025-08-01 01:31:18,578 | WARNING | pyMut.annotate.actionable_mutation | Gene does not exist for variant at index 28 in batch 3 2025-08-01 01:31:18,578 | WARNING | pyMut.annotate.actionable_mutation | Unknown oncogenicity for variant at index 28 in batch 3 2025-08-01 01:31:18,578 | WARNING | pyMut.annotate.actionable_mutation | Gene does not exist for variant at index 29 in batch 3 2025-08-01 01:31:18,579 | WARNING | pyMut.annotate.actionable_mutation | Unknown oncogenicity for variant at index 29 in batch 3 2025-08-01 01:31:18,579 | WARNING | pyMut.annotate.actionable_mutation | Gene does not exist for variant at index 30 in batch 3 2025-08-01 01:31:18,579 | WARNING | pyMut.annotate.actionable_mutation | Unknown oncogenicity for variant at index 30 in batch 3 2025-08-01 01:31:18,579 | WARNING | pyMut.annotate.actionable_mutation | Gene does not exist for variant at index 31 in batch 3 2025-08-01 01:31:18,580 | WARNING | pyMut.annotate.actionable_mutation | Unknown oncogenicity for variant at index 31 in batch 3 2025-08-01 01:31:18,580 | WARNING | pyMut.annotate.actionable_mutation | Gene does not exist for variant at index 32 in batch 3 2025-08-01 01:31:18,580 | WARNING | pyMut.annotate.actionable_mutation | Unknown oncogenicity for variant at index 32 in batch 3 2025-08-01 01:31:18,581 | WARNING | pyMut.annotate.actionable_mutation | Gene does not exist for variant at index 33 in batch 3 2025-08-01 01:31:18,581 | WARNING | pyMut.annotate.actionable_mutation | Unknown oncogenicity for variant at index 33 in batch 3 2025-08-01 01:31:18,584 | WARNING | pyMut.annotate.actionable_mutation | Unknown oncogenicity for variant at index 34 in batch 3 2025-08-01 01:31:18,584 | WARNING | pyMut.annotate.actionable_mutation | Unknown oncogenicity for variant at index 35 in batch 3 2025-08-01 01:31:18,584 | WARNING | pyMut.annotate.actionable_mutation | Gene does not exist for variant at index 36 in batch 3 2025-08-01 01:31:18,584 | WARNING | pyMut.annotate.actionable_mutation | Unknown oncogenicity for variant at index 36 in batch 3 2025-08-01 01:31:18,585 | WARNING | pyMut.annotate.actionable_mutation | Unknown oncogenicity for variant at index 37 in batch 3 2025-08-01 01:31:18,585 | WARNING | pyMut.annotate.actionable_mutation | Unknown oncogenicity for variant at index 38 in batch 3 2025-08-01 01:31:18,586 | WARNING | pyMut.annotate.actionable_mutation | Gene does not exist for variant at index 39 in batch 3 2025-08-01 01:31:18,586 | WARNING | pyMut.annotate.actionable_mutation | Unknown oncogenicity for variant at index 39 in batch 3 2025-08-01 01:31:18,586 | WARNING | pyMut.annotate.actionable_mutation | Gene does not exist for variant at index 40 in batch 3 2025-08-01 01:31:18,587 | WARNING | pyMut.annotate.actionable_mutation | Unknown oncogenicity for variant at index 40 in batch 3 2025-08-01 01:31:18,587 | WARNING | pyMut.annotate.actionable_mutation | Gene does not exist for variant at index 41 in batch 3 2025-08-01 01:31:18,588 | WARNING | pyMut.annotate.actionable_mutation | Unknown oncogenicity for variant at index 41 in batch 3 2025-08-01 01:31:18,588 | WARNING | pyMut.annotate.actionable_mutation | Gene does not exist for variant at index 42 in batch 3 2025-08-01 01:31:18,588 | WARNING | pyMut.annotate.actionable_mutation | Unknown oncogenicity for variant at index 42 in batch 3 2025-08-01 01:31:18,588 | WARNING | pyMut.annotate.actionable_mutation | Gene does not exist for variant at index 43 in batch 3 2025-08-01 01:31:18,589 | WARNING | pyMut.annotate.actionable_mutation | Unknown oncogenicity for variant at index 43 in batch 3 2025-08-01 01:31:18,589 | WARNING | pyMut.annotate.actionable_mutation | Unknown oncogenicity for variant at index 44 in batch 3 2025-08-01 01:31:18,589 | WARNING | pyMut.annotate.actionable_mutation | Gene does not exist for variant at index 46 in batch 3 2025-08-01 01:31:18,590 | WARNING | pyMut.annotate.actionable_mutation | Unknown oncogenicity for variant at index 46 in batch 3 2025-08-01 01:31:18,590 | WARNING | pyMut.annotate.actionable_mutation | Gene does not exist for variant at index 47 in batch 3 2025-08-01 01:31:18,590 | WARNING | pyMut.annotate.actionable_mutation | Unknown oncogenicity for variant at index 47 in batch 3 2025-08-01 01:31:18,591 | WARNING | pyMut.annotate.actionable_mutation | Gene does not exist for variant at index 48 in batch 3 2025-08-01 01:31:18,591 | WARNING | pyMut.annotate.actionable_mutation | Unknown oncogenicity for variant at index 48 in batch 3 2025-08-01 01:31:18,591 | WARNING | pyMut.annotate.actionable_mutation | Unknown oncogenicity for variant at index 49 in batch 3 2025-08-01 01:31:18,592 | WARNING | pyMut.annotate.actionable_mutation | Gene does not exist for variant at index 50 in batch 3 2025-08-01 01:31:18,593 | WARNING | pyMut.annotate.actionable_mutation | Unknown oncogenicity for variant at index 50 in batch 3 2025-08-01 01:31:18,593 | WARNING | pyMut.annotate.actionable_mutation | Gene does not exist for variant at index 51 in batch 3 2025-08-01 01:31:18,593 | WARNING | pyMut.annotate.actionable_mutation | Unknown oncogenicity for variant at index 51 in batch 3 2025-08-01 01:31:18,593 | WARNING | pyMut.annotate.actionable_mutation | Unknown oncogenicity for variant at index 52 in batch 3 2025-08-01 01:31:18,594 | WARNING | pyMut.annotate.actionable_mutation | Gene does not exist for variant at index 53 in batch 3 2025-08-01 01:31:18,594 | WARNING | pyMut.annotate.actionable_mutation | Unknown oncogenicity for variant at index 53 in batch 3 2025-08-01 01:31:18,594 | WARNING | pyMut.annotate.actionable_mutation | Gene does not exist for variant at index 54 in batch 3 2025-08-01 01:31:18,594 | WARNING | pyMut.annotate.actionable_mutation | Unknown oncogenicity for variant at index 54 in batch 3 2025-08-01 01:31:18,594 | WARNING | pyMut.annotate.actionable_mutation | Gene does not exist for variant at index 55 in batch 3 2025-08-01 01:31:18,595 | WARNING | pyMut.annotate.actionable_mutation | Unknown oncogenicity for variant at index 55 in batch 3 2025-08-01 01:31:18,595 | WARNING | pyMut.annotate.actionable_mutation | Gene does not exist for variant at index 56 in batch 3 2025-08-01 01:31:18,595 | WARNING | pyMut.annotate.actionable_mutation | Unknown oncogenicity for variant at index 56 in batch 3 2025-08-01 01:31:18,595 | WARNING | pyMut.annotate.actionable_mutation | Unknown oncogenicity for variant at index 57 in batch 3 2025-08-01 01:31:18,595 | WARNING | pyMut.annotate.actionable_mutation | Gene does not exist for variant at index 58 in batch 3 2025-08-01 01:31:18,596 | WARNING | pyMut.annotate.actionable_mutation | Unknown oncogenicity for variant at index 58 in batch 3 2025-08-01 01:31:18,596 | WARNING | pyMut.annotate.actionable_mutation | Gene does not exist for variant at index 59 in batch 3 2025-08-01 01:31:18,596 | WARNING | pyMut.annotate.actionable_mutation | Unknown oncogenicity for variant at index 59 in batch 3 2025-08-01 01:31:18,596 | WARNING | pyMut.annotate.actionable_mutation | Gene does not exist for variant at index 60 in batch 3 2025-08-01 01:31:18,596 | WARNING | pyMut.annotate.actionable_mutation | Unknown oncogenicity for variant at index 60 in batch 3 2025-08-01 01:31:18,597 | WARNING | pyMut.annotate.actionable_mutation | Gene does not exist for variant at index 61 in batch 3 2025-08-01 01:31:18,598 | WARNING | pyMut.annotate.actionable_mutation | Unknown oncogenicity for variant at index 61 in batch 3 2025-08-01 01:31:18,599 | WARNING | pyMut.annotate.actionable_mutation | Gene does not exist for variant at index 62 in batch 3 2025-08-01 01:31:18,599 | WARNING | pyMut.annotate.actionable_mutation | Unknown oncogenicity for variant at index 62 in batch 3 2025-08-01 01:31:18,599 | WARNING | pyMut.annotate.actionable_mutation | Unknown oncogenicity for variant at index 80 in batch 3 2025-08-01 01:31:18,600 | WARNING | pyMut.annotate.actionable_mutation | Gene does not exist for variant at index 82 in batch 3 2025-08-01 01:31:18,600 | WARNING | pyMut.annotate.actionable_mutation | Unknown oncogenicity for variant at index 82 in batch 3 2025-08-01 01:31:18,600 | WARNING | pyMut.annotate.actionable_mutation | Gene does not exist for variant at index 83 in batch 3 2025-08-01 01:31:18,600 | WARNING | pyMut.annotate.actionable_mutation | Unknown oncogenicity for variant at index 83 in batch 3 2025-08-01 01:31:18,601 | WARNING | pyMut.annotate.actionable_mutation | Unknown oncogenicity for variant at index 84 in batch 3 2025-08-01 01:31:18,601 | WARNING | pyMut.annotate.actionable_mutation | Unknown oncogenicity for variant at index 85 in batch 3 2025-08-01 01:31:18,601 | WARNING | pyMut.annotate.actionable_mutation | Gene does not exist for variant at index 86 in batch 3 2025-08-01 01:31:18,601 | WARNING | pyMut.annotate.actionable_mutation | Unknown oncogenicity for variant at index 86 in batch 3 2025-08-01 01:31:18,601 | WARNING | pyMut.annotate.actionable_mutation | Gene does not exist for variant at index 87 in batch 3 2025-08-01 01:31:18,602 | WARNING | pyMut.annotate.actionable_mutation | Unknown oncogenicity for variant at index 87 in batch 3 2025-08-01 01:31:18,602 | WARNING | pyMut.annotate.actionable_mutation | Gene does not exist for variant at index 88 in batch 3 2025-08-01 01:31:18,602 | WARNING | pyMut.annotate.actionable_mutation | Unknown oncogenicity for variant at index 88 in batch 3 2025-08-01 01:31:18,602 | WARNING | pyMut.annotate.actionable_mutation | Gene does not exist for variant at index 89 in batch 3 2025-08-01 01:31:18,603 | WARNING | pyMut.annotate.actionable_mutation | Unknown oncogenicity for variant at index 89 in batch 3 2025-08-01 01:31:18,603 | WARNING | pyMut.annotate.actionable_mutation | Gene does not exist for variant at index 90 in batch 3 2025-08-01 01:31:18,603 | WARNING | pyMut.annotate.actionable_mutation | Unknown oncogenicity for variant at index 90 in batch 3 2025-08-01 01:31:18,603 | WARNING | pyMut.annotate.actionable_mutation | Gene does not exist for variant at index 91 in batch 3 2025-08-01 01:31:18,603 | WARNING | pyMut.annotate.actionable_mutation | Unknown oncogenicity for variant at index 91 in batch 3 2025-08-01 01:31:18,604 | WARNING | pyMut.annotate.actionable_mutation | Gene does not exist for variant at index 92 in batch 3 2025-08-01 01:31:18,604 | WARNING | pyMut.annotate.actionable_mutation | Unknown oncogenicity for variant at index 92 in batch 3 2025-08-01 01:31:18,604 | WARNING | pyMut.annotate.actionable_mutation | Gene does not exist for variant at index 93 in batch 3 2025-08-01 01:31:18,604 | WARNING | pyMut.annotate.actionable_mutation | Unknown oncogenicity for variant at index 93 in batch 3 2025-08-01 01:31:18,604 | WARNING | pyMut.annotate.actionable_mutation | Gene does not exist for variant at index 94 in batch 3 2025-08-01 01:31:18,605 | WARNING | pyMut.annotate.actionable_mutation | Unknown oncogenicity for variant at index 94 in batch 3 2025-08-01 01:31:18,605 | WARNING | pyMut.annotate.actionable_mutation | Gene does not exist for variant at index 95 in batch 3 2025-08-01 01:31:18,605 | WARNING | pyMut.annotate.actionable_mutation | Unknown oncogenicity for variant at index 95 in batch 3 2025-08-01 01:31:18,605 | WARNING | pyMut.annotate.actionable_mutation | Gene does not exist for variant at index 96 in batch 3 2025-08-01 01:31:18,605 | WARNING | pyMut.annotate.actionable_mutation | Unknown oncogenicity for variant at index 96 in batch 3 2025-08-01 01:31:18,606 | WARNING | pyMut.annotate.actionable_mutation | Gene does not exist for variant at index 97 in batch 3 2025-08-01 01:31:18,607 | WARNING | pyMut.annotate.actionable_mutation | Unknown oncogenicity for variant at index 97 in batch 3 2025-08-01 01:31:18,607 | WARNING | pyMut.annotate.actionable_mutation | Gene does not exist for variant at index 98 in batch 3 2025-08-01 01:31:18,607 | WARNING | pyMut.annotate.actionable_mutation | Unknown oncogenicity for variant at index 98 in batch 3 2025-08-01 01:31:18,610 | WARNING | pyMut.annotate.actionable_mutation | Gene does not exist for variant at index 99 in batch 3 2025-08-01 01:31:18,612 | WARNING | pyMut.annotate.actionable_mutation | Unknown oncogenicity for variant at index 99 in batch 3 2025-08-01 01:31:18,612 | WARNING | pyMut.annotate.actionable_mutation | Gene does not exist for variant at index 100 in batch 3 2025-08-01 01:31:18,612 | WARNING | pyMut.annotate.actionable_mutation | Unknown oncogenicity for variant at index 100 in batch 3 2025-08-01 01:31:18,612 | WARNING | pyMut.annotate.actionable_mutation | Gene does not exist for variant at index 101 in batch 3 2025-08-01 01:31:18,613 | WARNING | pyMut.annotate.actionable_mutation | Unknown oncogenicity for variant at index 101 in batch 3 2025-08-01 01:31:18,613 | WARNING | pyMut.annotate.actionable_mutation | Gene does not exist for variant at index 102 in batch 3 2025-08-01 01:31:18,613 | WARNING | pyMut.annotate.actionable_mutation | Unknown oncogenicity for variant at index 102 in batch 3 2025-08-01 01:31:18,613 | WARNING | pyMut.annotate.actionable_mutation | Gene does not exist for variant at index 103 in batch 3 2025-08-01 01:31:18,614 | WARNING | pyMut.annotate.actionable_mutation | Unknown oncogenicity for variant at index 103 in batch 3 2025-08-01 01:31:18,614 | WARNING | pyMut.annotate.actionable_mutation | Gene does not exist for variant at index 104 in batch 3 2025-08-01 01:31:18,614 | WARNING | pyMut.annotate.actionable_mutation | Unknown oncogenicity for variant at index 104 in batch 3 2025-08-01 01:31:18,615 | WARNING | pyMut.annotate.actionable_mutation | Gene does not exist for variant at index 105 in batch 3 2025-08-01 01:31:18,616 | WARNING | pyMut.annotate.actionable_mutation | Unknown oncogenicity for variant at index 105 in batch 3 2025-08-01 01:31:18,616 | WARNING | pyMut.annotate.actionable_mutation | Gene does not exist for variant at index 106 in batch 3 2025-08-01 01:31:18,616 | WARNING | pyMut.annotate.actionable_mutation | Unknown oncogenicity for variant at index 106 in batch 3 2025-08-01 01:31:18,617 | WARNING | pyMut.annotate.actionable_mutation | Gene does not exist for variant at index 107 in batch 3 2025-08-01 01:31:18,617 | WARNING | pyMut.annotate.actionable_mutation | Unknown oncogenicity for variant at index 107 in batch 3 2025-08-01 01:31:18,617 | WARNING | pyMut.annotate.actionable_mutation | Gene does not exist for variant at index 108 in batch 3 2025-08-01 01:31:18,618 | WARNING | pyMut.annotate.actionable_mutation | Unknown oncogenicity for variant at index 108 in batch 3 2025-08-01 01:31:18,618 | WARNING | pyMut.annotate.actionable_mutation | Unknown oncogenicity for variant at index 109 in batch 3 2025-08-01 01:31:18,618 | WARNING | pyMut.annotate.actionable_mutation | Gene does not exist for variant at index 110 in batch 3 2025-08-01 01:31:18,619 | WARNING | pyMut.annotate.actionable_mutation | Unknown oncogenicity for variant at index 110 in batch 3 2025-08-01 01:31:18,619 | WARNING | pyMut.annotate.actionable_mutation | Gene does not exist for variant at index 111 in batch 3 2025-08-01 01:31:18,619 | WARNING | pyMut.annotate.actionable_mutation | Unknown oncogenicity for variant at index 111 in batch 3 2025-08-01 01:31:18,619 | WARNING | pyMut.annotate.actionable_mutation | Gene does not exist for variant at index 112 in batch 3 2025-08-01 01:31:18,621 | WARNING | pyMut.annotate.actionable_mutation | Unknown oncogenicity for variant at index 112 in batch 3 2025-08-01 01:31:18,622 | WARNING | pyMut.annotate.actionable_mutation | Gene does not exist for variant at index 113 in batch 3 2025-08-01 01:31:18,622 | WARNING | pyMut.annotate.actionable_mutation | Unknown oncogenicity for variant at index 113 in batch 3 2025-08-01 01:31:18,622 | WARNING | pyMut.annotate.actionable_mutation | Gene does not exist for variant at index 114 in batch 3 2025-08-01 01:31:18,623 | WARNING | pyMut.annotate.actionable_mutation | Unknown oncogenicity for variant at index 114 in batch 3 2025-08-01 01:31:18,623 | WARNING | pyMut.annotate.actionable_mutation | Gene does not exist for variant at index 115 in batch 3 2025-08-01 01:31:18,623 | WARNING | pyMut.annotate.actionable_mutation | Unknown oncogenicity for variant at index 115 in batch 3 2025-08-01 01:31:18,623 | WARNING | pyMut.annotate.actionable_mutation | Gene does not exist for variant at index 116 in batch 3 2025-08-01 01:31:18,624 | WARNING | pyMut.annotate.actionable_mutation | Unknown oncogenicity for variant at index 116 in batch 3 2025-08-01 01:31:18,624 | WARNING | pyMut.annotate.actionable_mutation | Gene does not exist for variant at index 117 in batch 3 2025-08-01 01:31:18,624 | WARNING | pyMut.annotate.actionable_mutation | Unknown oncogenicity for variant at index 117 in batch 3 2025-08-01 01:31:18,624 | WARNING | pyMut.annotate.actionable_mutation | Gene does not exist for variant at index 118 in batch 3 2025-08-01 01:31:18,625 | WARNING | pyMut.annotate.actionable_mutation | Unknown oncogenicity for variant at index 118 in batch 3 2025-08-01 01:31:18,625 | WARNING | pyMut.annotate.actionable_mutation | Unknown oncogenicity for variant at index 119 in batch 3 2025-08-01 01:31:18,625 | WARNING | pyMut.annotate.actionable_mutation | Gene does not exist for variant at index 120 in batch 3 2025-08-01 01:31:18,625 | WARNING | pyMut.annotate.actionable_mutation | Unknown oncogenicity for variant at index 120 in batch 3 2025-08-01 01:31:18,625 | WARNING | pyMut.annotate.actionable_mutation | Gene does not exist for variant at index 121 in batch 3 2025-08-01 01:31:18,626 | WARNING | pyMut.annotate.actionable_mutation | Unknown oncogenicity for variant at index 121 in batch 3 2025-08-01 01:31:18,626 | WARNING | pyMut.annotate.actionable_mutation | Gene does not exist for variant at index 122 in batch 3 2025-08-01 01:31:18,626 | WARNING | pyMut.annotate.actionable_mutation | Unknown oncogenicity for variant at index 122 in batch 3 2025-08-01 01:31:18,626 | WARNING | pyMut.annotate.actionable_mutation | Gene does not exist for variant at index 123 in batch 3 2025-08-01 01:31:18,627 | WARNING | pyMut.annotate.actionable_mutation | Unknown oncogenicity for variant at index 123 in batch 3 2025-08-01 01:31:18,627 | WARNING | pyMut.annotate.actionable_mutation | Gene does not exist for variant at index 124 in batch 3 2025-08-01 01:31:18,627 | WARNING | pyMut.annotate.actionable_mutation | Unknown oncogenicity for variant at index 124 in batch 3 2025-08-01 01:31:18,627 | WARNING | pyMut.annotate.actionable_mutation | Gene does not exist for variant at index 125 in batch 3 2025-08-01 01:31:18,628 | WARNING | pyMut.annotate.actionable_mutation | Unknown oncogenicity for variant at index 125 in batch 3 2025-08-01 01:31:18,628 | WARNING | pyMut.annotate.actionable_mutation | Gene does not exist for variant at index 126 in batch 3 2025-08-01 01:31:18,628 | WARNING | pyMut.annotate.actionable_mutation | Unknown oncogenicity for variant at index 126 in batch 3 2025-08-01 01:31:18,628 | WARNING | pyMut.annotate.actionable_mutation | Gene does not exist for variant at index 127 in batch 3 2025-08-01 01:31:18,629 | WARNING | pyMut.annotate.actionable_mutation | Unknown oncogenicity for variant at index 127 in batch 3 2025-08-01 01:31:18,629 | WARNING | pyMut.annotate.actionable_mutation | Gene does not exist for variant at index 128 in batch 3 2025-08-01 01:31:18,629 | WARNING | pyMut.annotate.actionable_mutation | Unknown oncogenicity for variant at index 128 in batch 3 2025-08-01 01:31:18,629 | WARNING | pyMut.annotate.actionable_mutation | Gene does not exist for variant at index 129 in batch 3 2025-08-01 01:31:18,629 | WARNING | pyMut.annotate.actionable_mutation | Unknown oncogenicity for variant at index 129 in batch 3 2025-08-01 01:31:18,630 | WARNING | pyMut.annotate.actionable_mutation | Gene does not exist for variant at index 130 in batch 3 2025-08-01 01:31:18,630 | WARNING | pyMut.annotate.actionable_mutation | Unknown oncogenicity for variant at index 130 in batch 3 2025-08-01 01:31:18,630 | WARNING | pyMut.annotate.actionable_mutation | Gene does not exist for variant at index 131 in batch 3 2025-08-01 01:31:18,630 | WARNING | pyMut.annotate.actionable_mutation | Unknown oncogenicity for variant at index 131 in batch 3 2025-08-01 01:31:18,630 | WARNING | pyMut.annotate.actionable_mutation | Gene does not exist for variant at index 132 in batch 3 2025-08-01 01:31:18,631 | WARNING | pyMut.annotate.actionable_mutation | Unknown oncogenicity for variant at index 132 in batch 3 2025-08-01 01:31:18,631 | WARNING | pyMut.annotate.actionable_mutation | Gene does not exist for variant at index 133 in batch 3 2025-08-01 01:31:18,631 | WARNING | pyMut.annotate.actionable_mutation | Unknown oncogenicity for variant at index 133 in batch 3 2025-08-01 01:31:18,631 | WARNING | pyMut.annotate.actionable_mutation | Gene does not exist for variant at index 134 in batch 3 2025-08-01 01:31:18,634 | WARNING | pyMut.annotate.actionable_mutation | Unknown oncogenicity for variant at index 134 in batch 3 2025-08-01 01:31:18,634 | WARNING | pyMut.annotate.actionable_mutation | Gene does not exist for variant at index 135 in batch 3 2025-08-01 01:31:18,635 | WARNING | pyMut.annotate.actionable_mutation | Unknown oncogenicity for variant at index 135 in batch 3 2025-08-01 01:31:18,635 | WARNING | pyMut.annotate.actionable_mutation | Gene does not exist for variant at index 136 in batch 3 2025-08-01 01:31:18,636 | WARNING | pyMut.annotate.actionable_mutation | Unknown oncogenicity for variant at index 136 in batch 3 2025-08-01 01:31:18,636 | WARNING | pyMut.annotate.actionable_mutation | Gene does not exist for variant at index 137 in batch 3 2025-08-01 01:31:18,636 | WARNING | pyMut.annotate.actionable_mutation | Unknown oncogenicity for variant at index 137 in batch 3 2025-08-01 01:31:18,637 | WARNING | pyMut.annotate.actionable_mutation | Gene does not exist for variant at index 138 in batch 3 2025-08-01 01:31:18,637 | WARNING | pyMut.annotate.actionable_mutation | Unknown oncogenicity for variant at index 138 in batch 3 2025-08-01 01:31:18,637 | WARNING | pyMut.annotate.actionable_mutation | Gene does not exist for variant at index 139 in batch 3 2025-08-01 01:31:18,638 | WARNING | pyMut.annotate.actionable_mutation | Unknown oncogenicity for variant at index 139 in batch 3 2025-08-01 01:31:18,638 | WARNING | pyMut.annotate.actionable_mutation | Gene does not exist for variant at index 140 in batch 3 2025-08-01 01:31:18,638 | WARNING | pyMut.annotate.actionable_mutation | Unknown oncogenicity for variant at index 140 in batch 3 2025-08-01 01:31:18,639 | WARNING | pyMut.annotate.actionable_mutation | Gene does not exist for variant at index 141 in batch 3 2025-08-01 01:31:18,640 | WARNING | pyMut.annotate.actionable_mutation | Unknown oncogenicity for variant at index 141 in batch 3 2025-08-01 01:31:18,640 | WARNING | pyMut.annotate.actionable_mutation | Gene does not exist for variant at index 142 in batch 3 2025-08-01 01:31:18,641 | WARNING | pyMut.annotate.actionable_mutation | Unknown oncogenicity for variant at index 142 in batch 3 2025-08-01 01:31:18,641 | WARNING | pyMut.annotate.actionable_mutation | Gene does not exist for variant at index 143 in batch 3 2025-08-01 01:31:18,641 | WARNING | pyMut.annotate.actionable_mutation | Unknown oncogenicity for variant at index 143 in batch 3 2025-08-01 01:31:18,642 | WARNING | pyMut.annotate.actionable_mutation | Gene does not exist for variant at index 144 in batch 3 2025-08-01 01:31:18,643 | WARNING | pyMut.annotate.actionable_mutation | Unknown oncogenicity for variant at index 144 in batch 3 2025-08-01 01:31:18,643 | WARNING | pyMut.annotate.actionable_mutation | Gene does not exist for variant at index 145 in batch 3 2025-08-01 01:31:18,643 | WARNING | pyMut.annotate.actionable_mutation | Unknown oncogenicity for variant at index 145 in batch 3 2025-08-01 01:31:18,644 | WARNING | pyMut.annotate.actionable_mutation | Gene does not exist for variant at index 146 in batch 3 2025-08-01 01:31:18,644 | WARNING | pyMut.annotate.actionable_mutation | Unknown oncogenicity for variant at index 146 in batch 3 2025-08-01 01:31:18,644 | WARNING | pyMut.annotate.actionable_mutation | Gene does not exist for variant at index 147 in batch 3 2025-08-01 01:31:18,644 | WARNING | pyMut.annotate.actionable_mutation | Unknown oncogenicity for variant at index 147 in batch 3 2025-08-01 01:31:18,645 | WARNING | pyMut.annotate.actionable_mutation | Gene does not exist for variant at index 148 in batch 3 2025-08-01 01:31:18,645 | WARNING | pyMut.annotate.actionable_mutation | Unknown oncogenicity for variant at index 148 in batch 3 2025-08-01 01:31:18,646 | WARNING | pyMut.annotate.actionable_mutation | Gene does not exist for variant at index 149 in batch 3 2025-08-01 01:31:18,646 | WARNING | pyMut.annotate.actionable_mutation | Unknown oncogenicity for variant at index 149 in batch 3 2025-08-01 01:31:18,646 | WARNING | pyMut.annotate.actionable_mutation | Unknown oncogenicity for variant at index 150 in batch 3 2025-08-01 01:31:18,646 | WARNING | pyMut.annotate.actionable_mutation | Gene does not exist for variant at index 151 in batch 3 2025-08-01 01:31:18,647 | WARNING | pyMut.annotate.actionable_mutation | Unknown oncogenicity for variant at index 151 in batch 3 2025-08-01 01:31:18,647 | WARNING | pyMut.annotate.actionable_mutation | Gene does not exist for variant at index 152 in batch 3 2025-08-01 01:31:18,647 | WARNING | pyMut.annotate.actionable_mutation | Unknown oncogenicity for variant at index 152 in batch 3 2025-08-01 01:31:18,648 | WARNING | pyMut.annotate.actionable_mutation | Gene does not exist for variant at index 153 in batch 3 2025-08-01 01:31:18,648 | WARNING | pyMut.annotate.actionable_mutation | Unknown oncogenicity for variant at index 153 in batch 3 2025-08-01 01:31:18,648 | WARNING | pyMut.annotate.actionable_mutation | Gene does not exist for variant at index 154 in batch 3 2025-08-01 01:31:18,648 | WARNING | pyMut.annotate.actionable_mutation | Unknown oncogenicity for variant at index 154 in batch 3 2025-08-01 01:31:18,649 | WARNING | pyMut.annotate.actionable_mutation | Gene does not exist for variant at index 155 in batch 3 2025-08-01 01:31:18,649 | WARNING | pyMut.annotate.actionable_mutation | Unknown oncogenicity for variant at index 155 in batch 3 2025-08-01 01:31:18,649 | WARNING | pyMut.annotate.actionable_mutation | Gene does not exist for variant at index 156 in batch 3 2025-08-01 01:31:18,650 | WARNING | pyMut.annotate.actionable_mutation | Unknown oncogenicity for variant at index 156 in batch 3 2025-08-01 01:31:18,650 | WARNING | pyMut.annotate.actionable_mutation | Gene does not exist for variant at index 157 in batch 3 2025-08-01 01:31:18,650 | WARNING | pyMut.annotate.actionable_mutation | Unknown oncogenicity for variant at index 157 in batch 3 2025-08-01 01:31:18,651 | WARNING | pyMut.annotate.actionable_mutation | Gene does not exist for variant at index 158 in batch 3 2025-08-01 01:31:18,651 | WARNING | pyMut.annotate.actionable_mutation | Unknown oncogenicity for variant at index 158 in batch 3 2025-08-01 01:31:18,651 | WARNING | pyMut.annotate.actionable_mutation | Gene does not exist for variant at index 159 in batch 3 2025-08-01 01:31:18,651 | WARNING | pyMut.annotate.actionable_mutation | Unknown oncogenicity for variant at index 159 in batch 3 2025-08-01 01:31:18,652 | WARNING | pyMut.annotate.actionable_mutation | Gene does not exist for variant at index 160 in batch 3 2025-08-01 01:31:18,652 | WARNING | pyMut.annotate.actionable_mutation | Unknown oncogenicity for variant at index 160 in batch 3 2025-08-01 01:31:18,653 | WARNING | pyMut.annotate.actionable_mutation | Gene does not exist for variant at index 161 in batch 3 2025-08-01 01:31:18,653 | WARNING | pyMut.annotate.actionable_mutation | Unknown oncogenicity for variant at index 161 in batch 3 2025-08-01 01:31:18,653 | WARNING | pyMut.annotate.actionable_mutation | Gene does not exist for variant at index 162 in batch 3 2025-08-01 01:31:18,653 | WARNING | pyMut.annotate.actionable_mutation | Unknown oncogenicity for variant at index 162 in batch 3 2025-08-01 01:31:18,653 | WARNING | pyMut.annotate.actionable_mutation | Gene does not exist for variant at index 163 in batch 3 2025-08-01 01:31:18,654 | WARNING | pyMut.annotate.actionable_mutation | Unknown oncogenicity for variant at index 163 in batch 3 2025-08-01 01:31:18,654 | WARNING | pyMut.annotate.actionable_mutation | Gene does not exist for variant at index 164 in batch 3 2025-08-01 01:31:18,654 | WARNING | pyMut.annotate.actionable_mutation | Unknown oncogenicity for variant at index 164 in batch 3 2025-08-01 01:31:18,654 | WARNING | pyMut.annotate.actionable_mutation | Gene does not exist for variant at index 165 in batch 3 2025-08-01 01:31:18,655 | WARNING | pyMut.annotate.actionable_mutation | Unknown oncogenicity for variant at index 165 in batch 3 2025-08-01 01:31:18,656 | WARNING | pyMut.annotate.actionable_mutation | Gene does not exist for variant at index 166 in batch 3 2025-08-01 01:31:18,656 | WARNING | pyMut.annotate.actionable_mutation | Unknown oncogenicity for variant at index 166 in batch 3 2025-08-01 01:31:18,656 | WARNING | pyMut.annotate.actionable_mutation | Gene does not exist for variant at index 167 in batch 3 2025-08-01 01:31:18,656 | WARNING | pyMut.annotate.actionable_mutation | Unknown oncogenicity for variant at index 167 in batch 3 2025-08-01 01:31:18,657 | WARNING | pyMut.annotate.actionable_mutation | Gene does not exist for variant at index 168 in batch 3 2025-08-01 01:31:18,657 | WARNING | pyMut.annotate.actionable_mutation | Unknown oncogenicity for variant at index 168 in batch 3 2025-08-01 01:31:18,657 | WARNING | pyMut.annotate.actionable_mutation | Gene does not exist for variant at index 169 in batch 3 2025-08-01 01:31:18,658 | WARNING | pyMut.annotate.actionable_mutation | Unknown oncogenicity for variant at index 169 in batch 3 2025-08-01 01:31:18,658 | WARNING | pyMut.annotate.actionable_mutation | Gene does not exist for variant at index 170 in batch 3 2025-08-01 01:31:18,658 | WARNING | pyMut.annotate.actionable_mutation | Unknown oncogenicity for variant at index 170 in batch 3 2025-08-01 01:31:18,659 | WARNING | pyMut.annotate.actionable_mutation | Unknown oncogenicity for variant at index 176 in batch 3 2025-08-01 01:31:18,659 | WARNING | pyMut.annotate.actionable_mutation | Gene does not exist for variant at index 177 in batch 3 2025-08-01 01:31:18,659 | WARNING | pyMut.annotate.actionable_mutation | Unknown oncogenicity for variant at index 177 in batch 3 2025-08-01 01:31:18,659 | WARNING | pyMut.annotate.actionable_mutation | Gene does not exist for variant at index 178 in batch 3 2025-08-01 01:31:18,660 | WARNING | pyMut.annotate.actionable_mutation | Unknown oncogenicity for variant at index 178 in batch 3 2025-08-01 01:31:18,660 | WARNING | pyMut.annotate.actionable_mutation | Gene does not exist for variant at index 179 in batch 3 2025-08-01 01:31:18,660 | WARNING | pyMut.annotate.actionable_mutation | Unknown oncogenicity for variant at index 179 in batch 3 2025-08-01 01:31:18,660 | WARNING | pyMut.annotate.actionable_mutation | Gene does not exist for variant at index 180 in batch 3 2025-08-01 01:31:18,661 | WARNING | pyMut.annotate.actionable_mutation | Unknown oncogenicity for variant at index 180 in batch 3 2025-08-01 01:31:18,661 | WARNING | pyMut.annotate.actionable_mutation | Gene does not exist for variant at index 181 in batch 3 2025-08-01 01:31:18,661 | WARNING | pyMut.annotate.actionable_mutation | Unknown oncogenicity for variant at index 181 in batch 3 2025-08-01 01:31:18,661 | WARNING | pyMut.annotate.actionable_mutation | Gene does not exist for variant at index 182 in batch 3 2025-08-01 01:31:18,662 | WARNING | pyMut.annotate.actionable_mutation | Unknown oncogenicity for variant at index 182 in batch 3 2025-08-01 01:31:18,662 | WARNING | pyMut.annotate.actionable_mutation | Gene does not exist for variant at index 183 in batch 3 2025-08-01 01:31:18,662 | WARNING | pyMut.annotate.actionable_mutation | Unknown oncogenicity for variant at index 183 in batch 3 2025-08-01 01:31:18,662 | WARNING | pyMut.annotate.actionable_mutation | Unknown oncogenicity for variant at index 184 in batch 3 2025-08-01 01:31:18,662 | WARNING | pyMut.annotate.actionable_mutation | Unknown oncogenicity for variant at index 185 in batch 3 2025-08-01 01:31:18,663 | WARNING | pyMut.annotate.actionable_mutation | Unknown oncogenicity for variant at index 186 in batch 3 2025-08-01 01:31:18,663 | WARNING | pyMut.annotate.actionable_mutation | Gene does not exist for variant at index 187 in batch 3 2025-08-01 01:31:18,663 | WARNING | pyMut.annotate.actionable_mutation | Unknown oncogenicity for variant at index 187 in batch 3 2025-08-01 01:31:18,664 | WARNING | pyMut.annotate.actionable_mutation | Gene does not exist for variant at index 188 in batch 3 2025-08-01 01:31:18,664 | WARNING | pyMut.annotate.actionable_mutation | Unknown oncogenicity for variant at index 188 in batch 3 2025-08-01 01:31:18,664 | WARNING | pyMut.annotate.actionable_mutation | Gene does not exist for variant at index 189 in batch 3 2025-08-01 01:31:18,664 | WARNING | pyMut.annotate.actionable_mutation | Unknown oncogenicity for variant at index 189 in batch 3 2025-08-01 01:31:18,665 | WARNING | pyMut.annotate.actionable_mutation | Gene does not exist for variant at index 190 in batch 3 2025-08-01 01:31:18,668 | WARNING | pyMut.annotate.actionable_mutation | Unknown oncogenicity for variant at index 190 in batch 3 2025-08-01 01:31:18,668 | WARNING | pyMut.annotate.actionable_mutation | Unknown oncogenicity for variant at index 191 in batch 3 2025-08-01 01:31:18,668 | WARNING | pyMut.annotate.actionable_mutation | Gene does not exist for variant at index 192 in batch 3 2025-08-01 01:31:18,669 | WARNING | pyMut.annotate.actionable_mutation | Unknown oncogenicity for variant at index 192 in batch 3 2025-08-01 01:31:18,669 | WARNING | pyMut.annotate.actionable_mutation | Gene does not exist for variant at index 193 in batch 3 2025-08-01 01:31:18,669 | WARNING | pyMut.annotate.actionable_mutation | Unknown oncogenicity for variant at index 193 in batch 3 2025-08-01 01:31:18,669 | WARNING | pyMut.annotate.actionable_mutation | Unknown oncogenicity for variant at index 194 in batch 3 2025-08-01 01:31:18,669 | WARNING | pyMut.annotate.actionable_mutation | Gene does not exist for variant at index 195 in batch 3 2025-08-01 01:31:18,670 | WARNING | pyMut.annotate.actionable_mutation | Unknown oncogenicity for variant at index 195 in batch 3 2025-08-01 01:31:18,670 | WARNING | pyMut.annotate.actionable_mutation | Gene does not exist for variant at index 196 in batch 3 2025-08-01 01:31:18,670 | WARNING | pyMut.annotate.actionable_mutation | Unknown oncogenicity for variant at index 196 in batch 3 2025-08-01 01:31:18,670 | WARNING | pyMut.annotate.actionable_mutation | Gene does not exist for variant at index 197 in batch 3 2025-08-01 01:31:18,671 | WARNING | pyMut.annotate.actionable_mutation | Unknown oncogenicity for variant at index 197 in batch 3 2025-08-01 01:31:18,671 | WARNING | pyMut.annotate.actionable_mutation | Gene does not exist for variant at index 198 in batch 3 2025-08-01 01:31:18,671 | WARNING | pyMut.annotate.actionable_mutation | Unknown oncogenicity for variant at index 198 in batch 3 2025-08-01 01:31:18,671 | WARNING | pyMut.annotate.actionable_mutation | Gene does not exist for variant at index 199 in batch 3 2025-08-01 01:31:18,672 | WARNING | pyMut.annotate.actionable_mutation | Unknown oncogenicity for variant at index 199 in batch 3 2025-08-01 01:31:18,672 | WARNING | pyMut.annotate.actionable_mutation | Gene does not exist for variant at index 200 in batch 3 2025-08-01 01:31:18,672 | WARNING | pyMut.annotate.actionable_mutation | Unknown oncogenicity for variant at index 200 in batch 3 2025-08-01 01:31:18,672 | WARNING | pyMut.annotate.actionable_mutation | Gene does not exist for variant at index 201 in batch 3 2025-08-01 01:31:18,672 | WARNING | pyMut.annotate.actionable_mutation | Unknown oncogenicity for variant at index 201 in batch 3 2025-08-01 01:31:18,673 | WARNING | pyMut.annotate.actionable_mutation | Gene does not exist for variant at index 202 in batch 3 2025-08-01 01:31:18,673 | WARNING | pyMut.annotate.actionable_mutation | Unknown oncogenicity for variant at index 202 in batch 3 2025-08-01 01:31:18,673 | WARNING | pyMut.annotate.actionable_mutation | Gene does not exist for variant at index 203 in batch 3 2025-08-01 01:31:18,673 | WARNING | pyMut.annotate.actionable_mutation | Unknown oncogenicity for variant at index 203 in batch 3 2025-08-01 01:31:18,674 | WARNING | pyMut.annotate.actionable_mutation | Gene does not exist for variant at index 204 in batch 3 2025-08-01 01:31:18,676 | WARNING | pyMut.annotate.actionable_mutation | Unknown oncogenicity for variant at index 204 in batch 3 2025-08-01 01:31:18,678 | WARNING | pyMut.annotate.actionable_mutation | Gene does not exist for variant at index 205 in batch 3 2025-08-01 01:31:18,678 | WARNING | pyMut.annotate.actionable_mutation | Unknown oncogenicity for variant at index 205 in batch 3 2025-08-01 01:31:18,678 | WARNING | pyMut.annotate.actionable_mutation | Gene does not exist for variant at index 206 in batch 3 2025-08-01 01:31:18,679 | WARNING | pyMut.annotate.actionable_mutation | Unknown oncogenicity for variant at index 206 in batch 3 2025-08-01 01:31:18,679 | WARNING | pyMut.annotate.actionable_mutation | Gene does not exist for variant at index 207 in batch 3 2025-08-01 01:31:18,681 | WARNING | pyMut.annotate.actionable_mutation | Unknown oncogenicity for variant at index 207 in batch 3 2025-08-01 01:31:18,681 | WARNING | pyMut.annotate.actionable_mutation | Gene does not exist for variant at index 208 in batch 3 2025-08-01 01:31:18,681 | WARNING | pyMut.annotate.actionable_mutation | Unknown oncogenicity for variant at index 208 in batch 3 2025-08-01 01:31:18,681 | WARNING | pyMut.annotate.actionable_mutation | Gene does not exist for variant at index 209 in batch 3 2025-08-01 01:31:18,681 | WARNING | pyMut.annotate.actionable_mutation | Unknown oncogenicity for variant at index 209 in batch 3 2025-08-01 01:31:18,682 | WARNING | pyMut.annotate.actionable_mutation | Gene does not exist for variant at index 210 in batch 3 2025-08-01 01:31:18,682 | WARNING | pyMut.annotate.actionable_mutation | Unknown oncogenicity for variant at index 210 in batch 3 2025-08-01 01:31:18,682 | WARNING | pyMut.annotate.actionable_mutation | Gene does not exist for variant at index 211 in batch 3 2025-08-01 01:31:18,683 | WARNING | pyMut.annotate.actionable_mutation | Unknown oncogenicity for variant at index 211 in batch 3 2025-08-01 01:31:18,683 | WARNING | pyMut.annotate.actionable_mutation | Gene does not exist for variant at index 212 in batch 3 2025-08-01 01:31:18,683 | WARNING | pyMut.annotate.actionable_mutation | Unknown oncogenicity for variant at index 212 in batch 3 2025-08-01 01:31:18,683 | WARNING | pyMut.annotate.actionable_mutation | Gene does not exist for variant at index 213 in batch 3 2025-08-01 01:31:18,684 | WARNING | pyMut.annotate.actionable_mutation | Unknown oncogenicity for variant at index 213 in batch 3 2025-08-01 01:31:18,684 | WARNING | pyMut.annotate.actionable_mutation | Gene does not exist for variant at index 214 in batch 3 2025-08-01 01:31:18,684 | WARNING | pyMut.annotate.actionable_mutation | Unknown oncogenicity for variant at index 214 in batch 3 2025-08-01 01:31:18,684 | WARNING | pyMut.annotate.actionable_mutation | Gene does not exist for variant at index 215 in batch 3 2025-08-01 01:31:18,684 | WARNING | pyMut.annotate.actionable_mutation | Unknown oncogenicity for variant at index 215 in batch 3 2025-08-01 01:31:18,685 | WARNING | pyMut.annotate.actionable_mutation | Gene does not exist for variant at index 216 in batch 3 2025-08-01 01:31:18,685 | WARNING | pyMut.annotate.actionable_mutation | Unknown oncogenicity for variant at index 216 in batch 3 2025-08-01 01:31:18,685 | WARNING | pyMut.annotate.actionable_mutation | Unknown oncogenicity for variant at index 217 in batch 3 2025-08-01 01:31:18,686 | WARNING | pyMut.annotate.actionable_mutation | Unknown oncogenicity for variant at index 218 in batch 3 2025-08-01 01:31:18,686 | WARNING | pyMut.annotate.actionable_mutation | Gene does not exist for variant at index 219 in batch 3 2025-08-01 01:31:18,686 | WARNING | pyMut.annotate.actionable_mutation | Unknown oncogenicity for variant at index 219 in batch 3 2025-08-01 01:31:18,686 | WARNING | pyMut.annotate.actionable_mutation | Gene does not exist for variant at index 220 in batch 3 2025-08-01 01:31:18,687 | WARNING | pyMut.annotate.actionable_mutation | Unknown oncogenicity for variant at index 220 in batch 3 2025-08-01 01:31:18,687 | WARNING | pyMut.annotate.actionable_mutation | Gene does not exist for variant at index 221 in batch 3 2025-08-01 01:31:18,687 | WARNING | pyMut.annotate.actionable_mutation | Unknown oncogenicity for variant at index 221 in batch 3 2025-08-01 01:31:18,687 | WARNING | pyMut.annotate.actionable_mutation | Gene does not exist for variant at index 222 in batch 3 2025-08-01 01:31:18,687 | WARNING | pyMut.annotate.actionable_mutation | Unknown oncogenicity for variant at index 222 in batch 3 2025-08-01 01:31:18,688 | WARNING | pyMut.annotate.actionable_mutation | Gene does not exist for variant at index 223 in batch 3 2025-08-01 01:31:18,688 | WARNING | pyMut.annotate.actionable_mutation | Unknown oncogenicity for variant at index 223 in batch 3 2025-08-01 01:31:18,688 | WARNING | pyMut.annotate.actionable_mutation | Unknown oncogenicity for variant at index 224 in batch 3 2025-08-01 01:31:18,688 | WARNING | pyMut.annotate.actionable_mutation | Gene does not exist for variant at index 225 in batch 3 2025-08-01 01:31:18,689 | WARNING | pyMut.annotate.actionable_mutation | Unknown oncogenicity for variant at index 225 in batch 3 2025-08-01 01:31:18,689 | WARNING | pyMut.annotate.actionable_mutation | Gene does not exist for variant at index 226 in batch 3 2025-08-01 01:31:18,690 | WARNING | pyMut.annotate.actionable_mutation | Unknown oncogenicity for variant at index 226 in batch 3 2025-08-01 01:31:18,690 | WARNING | pyMut.annotate.actionable_mutation | Unknown oncogenicity for variant at index 227 in batch 3 2025-08-01 01:31:18,690 | WARNING | pyMut.annotate.actionable_mutation | Gene does not exist for variant at index 228 in batch 3 2025-08-01 01:31:18,691 | WARNING | pyMut.annotate.actionable_mutation | Unknown oncogenicity for variant at index 228 in batch 3 2025-08-01 01:31:18,691 | WARNING | pyMut.annotate.actionable_mutation | Gene does not exist for variant at index 229 in batch 3 2025-08-01 01:31:18,691 | WARNING | pyMut.annotate.actionable_mutation | Unknown oncogenicity for variant at index 229 in batch 3 2025-08-01 01:31:18,691 | WARNING | pyMut.annotate.actionable_mutation | Gene does not exist for variant at index 230 in batch 3 2025-08-01 01:31:18,691 | WARNING | pyMut.annotate.actionable_mutation | Unknown oncogenicity for variant at index 230 in batch 3 2025-08-01 01:31:18,692 | WARNING | pyMut.annotate.actionable_mutation | Gene does not exist for variant at index 231 in batch 3 2025-08-01 01:31:18,692 | WARNING | pyMut.annotate.actionable_mutation | Unknown oncogenicity for variant at index 231 in batch 3 2025-08-01 01:31:18,692 | WARNING | pyMut.annotate.actionable_mutation | Gene does not exist for variant at index 232 in batch 3 2025-08-01 01:31:18,692 | WARNING | pyMut.annotate.actionable_mutation | Unknown oncogenicity for variant at index 232 in batch 3 2025-08-01 01:31:18,692 | WARNING | pyMut.annotate.actionable_mutation | Gene does not exist for variant at index 233 in batch 3 2025-08-01 01:31:18,693 | WARNING | pyMut.annotate.actionable_mutation | Unknown oncogenicity for variant at index 233 in batch 3 2025-08-01 01:31:18,693 | WARNING | pyMut.annotate.actionable_mutation | Gene does not exist for variant at index 234 in batch 3 2025-08-01 01:31:18,693 | WARNING | pyMut.annotate.actionable_mutation | Unknown oncogenicity for variant at index 234 in batch 3 2025-08-01 01:31:18,693 | WARNING | pyMut.annotate.actionable_mutation | Gene does not exist for variant at index 235 in batch 3 2025-08-01 01:31:18,694 | WARNING | pyMut.annotate.actionable_mutation | Unknown oncogenicity for variant at index 235 in batch 3 2025-08-01 01:31:18,694 | WARNING | pyMut.annotate.actionable_mutation | Gene does not exist for variant at index 236 in batch 3 2025-08-01 01:31:18,694 | WARNING | pyMut.annotate.actionable_mutation | Unknown oncogenicity for variant at index 236 in batch 3 2025-08-01 01:31:18,695 | WARNING | pyMut.annotate.actionable_mutation | Gene does not exist for variant at index 237 in batch 3 2025-08-01 01:31:18,695 | WARNING | pyMut.annotate.actionable_mutation | Unknown oncogenicity for variant at index 237 in batch 3 2025-08-01 01:31:18,695 | WARNING | pyMut.annotate.actionable_mutation | Gene does not exist for variant at index 238 in batch 3 2025-08-01 01:31:18,695 | WARNING | pyMut.annotate.actionable_mutation | Unknown oncogenicity for variant at index 238 in batch 3 2025-08-01 01:31:18,696 | WARNING | pyMut.annotate.actionable_mutation | Gene does not exist for variant at index 239 in batch 3 2025-08-01 01:31:18,696 | WARNING | pyMut.annotate.actionable_mutation | Unknown oncogenicity for variant at index 239 in batch 3 2025-08-01 01:31:18,696 | WARNING | pyMut.annotate.actionable_mutation | Gene does not exist for variant at index 240 in batch 3 2025-08-01 01:31:18,696 | WARNING | pyMut.annotate.actionable_mutation | Unknown oncogenicity for variant at index 240 in batch 3 2025-08-01 01:31:18,697 | WARNING | pyMut.annotate.actionable_mutation | Gene does not exist for variant at index 241 in batch 3 2025-08-01 01:31:18,697 | WARNING | pyMut.annotate.actionable_mutation | Unknown oncogenicity for variant at index 241 in batch 3 2025-08-01 01:31:18,697 | WARNING | pyMut.annotate.actionable_mutation | Gene does not exist for variant at index 242 in batch 3 2025-08-01 01:31:18,698 | WARNING | pyMut.annotate.actionable_mutation | Unknown oncogenicity for variant at index 242 in batch 3 2025-08-01 01:31:18,698 | WARNING | pyMut.annotate.actionable_mutation | Gene does not exist for variant at index 243 in batch 3 2025-08-01 01:31:18,698 | WARNING | pyMut.annotate.actionable_mutation | Unknown oncogenicity for variant at index 243 in batch 3 2025-08-01 01:31:18,699 | WARNING | pyMut.annotate.actionable_mutation | Gene does not exist for variant at index 244 in batch 3 2025-08-01 01:31:18,699 | WARNING | pyMut.annotate.actionable_mutation | Unknown oncogenicity for variant at index 244 in batch 3 2025-08-01 01:31:18,699 | WARNING | pyMut.annotate.actionable_mutation | Gene does not exist for variant at index 245 in batch 3 2025-08-01 01:31:18,699 | WARNING | pyMut.annotate.actionable_mutation | Unknown oncogenicity for variant at index 245 in batch 3 2025-08-01 01:31:18,699 | WARNING | pyMut.annotate.actionable_mutation | Gene does not exist for variant at index 246 in batch 3 2025-08-01 01:31:18,700 | WARNING | pyMut.annotate.actionable_mutation | Unknown oncogenicity for variant at index 246 in batch 3 2025-08-01 01:31:18,700 | WARNING | pyMut.annotate.actionable_mutation | Gene does not exist for variant at index 247 in batch 3 2025-08-01 01:31:18,700 | WARNING | pyMut.annotate.actionable_mutation | Unknown oncogenicity for variant at index 247 in batch 3 2025-08-01 01:31:18,701 | WARNING | pyMut.annotate.actionable_mutation | Gene does not exist for variant at index 248 in batch 3 2025-08-01 01:31:18,702 | WARNING | pyMut.annotate.actionable_mutation | Unknown oncogenicity for variant at index 248 in batch 3 2025-08-01 01:31:18,702 | WARNING | pyMut.annotate.actionable_mutation | Gene does not exist for variant at index 249 in batch 3 2025-08-01 01:31:18,702 | WARNING | pyMut.annotate.actionable_mutation | Unknown oncogenicity for variant at index 249 in batch 3 2025-08-01 01:31:18,702 | WARNING | pyMut.annotate.actionable_mutation | Gene does not exist for variant at index 250 in batch 3 2025-08-01 01:31:18,703 | WARNING | pyMut.annotate.actionable_mutation | Unknown oncogenicity for variant at index 250 in batch 3 2025-08-01 01:31:18,703 | WARNING | pyMut.annotate.actionable_mutation | Gene does not exist for variant at index 251 in batch 3 2025-08-01 01:31:18,704 | WARNING | pyMut.annotate.actionable_mutation | Unknown oncogenicity for variant at index 251 in batch 3 2025-08-01 01:31:18,704 | WARNING | pyMut.annotate.actionable_mutation | Gene does not exist for variant at index 252 in batch 3 2025-08-01 01:31:18,704 | WARNING | pyMut.annotate.actionable_mutation | Unknown oncogenicity for variant at index 252 in batch 3 2025-08-01 01:31:18,704 | WARNING | pyMut.annotate.actionable_mutation | Gene does not exist for variant at index 253 in batch 3 2025-08-01 01:31:18,704 | WARNING | pyMut.annotate.actionable_mutation | Unknown oncogenicity for variant at index 253 in batch 3 2025-08-01 01:31:18,705 | WARNING | pyMut.annotate.actionable_mutation | Unknown oncogenicity for variant at index 254 in batch 3 2025-08-01 01:31:18,705 | WARNING | pyMut.annotate.actionable_mutation | Gene does not exist for variant at index 255 in batch 3 2025-08-01 01:31:18,705 | WARNING | pyMut.annotate.actionable_mutation | Unknown oncogenicity for variant at index 255 in batch 3 2025-08-01 01:31:18,705 | WARNING | pyMut.annotate.actionable_mutation | Gene does not exist for variant at index 256 in batch 3 2025-08-01 01:31:18,705 | WARNING | pyMut.annotate.actionable_mutation | Unknown oncogenicity for variant at index 256 in batch 3 2025-08-01 01:31:18,706 | WARNING | pyMut.annotate.actionable_mutation | Gene does not exist for variant at index 257 in batch 3 2025-08-01 01:31:18,706 | WARNING | pyMut.annotate.actionable_mutation | Unknown oncogenicity for variant at index 257 in batch 3 2025-08-01 01:31:18,706 | WARNING | pyMut.annotate.actionable_mutation | Gene does not exist for variant at index 258 in batch 3 2025-08-01 01:31:18,706 | WARNING | pyMut.annotate.actionable_mutation | Unknown oncogenicity for variant at index 258 in batch 3 2025-08-01 01:31:18,708 | WARNING | pyMut.annotate.actionable_mutation | Gene does not exist for variant at index 259 in batch 3 2025-08-01 01:31:18,708 | WARNING | pyMut.annotate.actionable_mutation | Unknown oncogenicity for variant at index 259 in batch 3 2025-08-01 01:31:18,709 | WARNING | pyMut.annotate.actionable_mutation | Gene does not exist for variant at index 260 in batch 3 2025-08-01 01:31:18,709 | WARNING | pyMut.annotate.actionable_mutation | Unknown oncogenicity for variant at index 260 in batch 3 2025-08-01 01:31:18,709 | WARNING | pyMut.annotate.actionable_mutation | Gene does not exist for variant at index 261 in batch 3 2025-08-01 01:31:18,709 | WARNING | pyMut.annotate.actionable_mutation | Unknown oncogenicity for variant at index 261 in batch 3 2025-08-01 01:31:18,710 | WARNING | pyMut.annotate.actionable_mutation | Gene does not exist for variant at index 262 in batch 3 2025-08-01 01:31:18,710 | WARNING | pyMut.annotate.actionable_mutation | Unknown oncogenicity for variant at index 262 in batch 3 2025-08-01 01:31:18,710 | WARNING | pyMut.annotate.actionable_mutation | Gene does not exist for variant at index 263 in batch 3 2025-08-01 01:31:18,710 | WARNING | pyMut.annotate.actionable_mutation | Unknown oncogenicity for variant at index 263 in batch 3 2025-08-01 01:31:18,711 | WARNING | pyMut.annotate.actionable_mutation | Gene does not exist for variant at index 264 in batch 3 2025-08-01 01:31:18,711 | WARNING | pyMut.annotate.actionable_mutation | Unknown oncogenicity for variant at index 264 in batch 3 2025-08-01 01:31:18,711 | WARNING | pyMut.annotate.actionable_mutation | Gene does not exist for variant at index 265 in batch 3 2025-08-01 01:31:18,711 | WARNING | pyMut.annotate.actionable_mutation | Unknown oncogenicity for variant at index 265 in batch 3 2025-08-01 01:31:18,711 | WARNING | pyMut.annotate.actionable_mutation | Gene does not exist for variant at index 267 in batch 3 2025-08-01 01:31:18,712 | WARNING | pyMut.annotate.actionable_mutation | Unknown oncogenicity for variant at index 267 in batch 3 2025-08-01 01:31:18,712 | WARNING | pyMut.annotate.actionable_mutation | Gene does not exist for variant at index 268 in batch 3 2025-08-01 01:31:18,712 | WARNING | pyMut.annotate.actionable_mutation | Unknown oncogenicity for variant at index 268 in batch 3 2025-08-01 01:31:18,712 | WARNING | pyMut.annotate.actionable_mutation | Gene does not exist for variant at index 269 in batch 3 2025-08-01 01:31:18,713 | WARNING | pyMut.annotate.actionable_mutation | Unknown oncogenicity for variant at index 269 in batch 3 2025-08-01 01:31:18,713 | WARNING | pyMut.annotate.actionable_mutation | Gene does not exist for variant at index 270 in batch 3 2025-08-01 01:31:18,713 | WARNING | pyMut.annotate.actionable_mutation | Unknown oncogenicity for variant at index 270 in batch 3 2025-08-01 01:31:18,713 | WARNING | pyMut.annotate.actionable_mutation | Gene does not exist for variant at index 271 in batch 3 2025-08-01 01:31:18,713 | WARNING | pyMut.annotate.actionable_mutation | Unknown oncogenicity for variant at index 271 in batch 3 2025-08-01 01:31:18,714 | WARNING | pyMut.annotate.actionable_mutation | Gene does not exist for variant at index 272 in batch 3 2025-08-01 01:31:18,714 | WARNING | pyMut.annotate.actionable_mutation | Unknown oncogenicity for variant at index 272 in batch 3 2025-08-01 01:31:18,715 | WARNING | pyMut.annotate.actionable_mutation | Gene does not exist for variant at index 273 in batch 3 2025-08-01 01:31:18,715 | WARNING | pyMut.annotate.actionable_mutation | Unknown oncogenicity for variant at index 273 in batch 3 2025-08-01 01:31:18,715 | WARNING | pyMut.annotate.actionable_mutation | Gene does not exist for variant at index 274 in batch 3 2025-08-01 01:31:18,715 | WARNING | pyMut.annotate.actionable_mutation | Unknown oncogenicity for variant at index 274 in batch 3 2025-08-01 01:31:18,715 | WARNING | pyMut.annotate.actionable_mutation | Gene does not exist for variant at index 275 in batch 3 2025-08-01 01:31:18,716 | WARNING | pyMut.annotate.actionable_mutation | Unknown oncogenicity for variant at index 275 in batch 3 2025-08-01 01:31:18,716 | WARNING | pyMut.annotate.actionable_mutation | Gene does not exist for variant at index 276 in batch 3 2025-08-01 01:31:18,716 | WARNING | pyMut.annotate.actionable_mutation | Unknown oncogenicity for variant at index 276 in batch 3 2025-08-01 01:31:18,717 | WARNING | pyMut.annotate.actionable_mutation | Unknown oncogenicity for variant at index 277 in batch 3 2025-08-01 01:31:18,717 | WARNING | pyMut.annotate.actionable_mutation | Gene does not exist for variant at index 278 in batch 3 2025-08-01 01:31:18,717 | WARNING | pyMut.annotate.actionable_mutation | Unknown oncogenicity for variant at index 278 in batch 3 2025-08-01 01:31:18,717 | WARNING | pyMut.annotate.actionable_mutation | Gene does not exist for variant at index 279 in batch 3 2025-08-01 01:31:18,717 | WARNING | pyMut.annotate.actionable_mutation | Unknown oncogenicity for variant at index 279 in batch 3 2025-08-01 01:31:18,718 | WARNING | pyMut.annotate.actionable_mutation | Gene does not exist for variant at index 280 in batch 3 2025-08-01 01:31:18,718 | WARNING | pyMut.annotate.actionable_mutation | Unknown oncogenicity for variant at index 280 in batch 3 2025-08-01 01:31:18,718 | WARNING | pyMut.annotate.actionable_mutation | Gene does not exist for variant at index 281 in batch 3 2025-08-01 01:31:18,718 | WARNING | pyMut.annotate.actionable_mutation | Unknown oncogenicity for variant at index 281 in batch 3 2025-08-01 01:31:18,718 | WARNING | pyMut.annotate.actionable_mutation | Gene does not exist for variant at index 282 in batch 3 2025-08-01 01:31:18,719 | WARNING | pyMut.annotate.actionable_mutation | Unknown oncogenicity for variant at index 282 in batch 3 2025-08-01 01:31:18,719 | WARNING | pyMut.annotate.actionable_mutation | Gene does not exist for variant at index 283 in batch 3 2025-08-01 01:31:18,719 | WARNING | pyMut.annotate.actionable_mutation | Unknown oncogenicity for variant at index 283 in batch 3 2025-08-01 01:31:18,719 | WARNING | pyMut.annotate.actionable_mutation | Gene does not exist for variant at index 284 in batch 3 2025-08-01 01:31:18,719 | WARNING | pyMut.annotate.actionable_mutation | Unknown oncogenicity for variant at index 284 in batch 3 2025-08-01 01:31:18,720 | WARNING | pyMut.annotate.actionable_mutation | Gene does not exist for variant at index 285 in batch 3 2025-08-01 01:31:18,720 | WARNING | pyMut.annotate.actionable_mutation | Unknown oncogenicity for variant at index 285 in batch 3 2025-08-01 01:31:18,720 | WARNING | pyMut.annotate.actionable_mutation | Gene does not exist for variant at index 286 in batch 3 2025-08-01 01:31:18,720 | WARNING | pyMut.annotate.actionable_mutation | Unknown oncogenicity for variant at index 286 in batch 3 2025-08-01 01:31:18,720 | WARNING | pyMut.annotate.actionable_mutation | Gene does not exist for variant at index 287 in batch 3 2025-08-01 01:31:18,721 | WARNING | pyMut.annotate.actionable_mutation | Unknown oncogenicity for variant at index 287 in batch 3 2025-08-01 01:31:18,721 | WARNING | pyMut.annotate.actionable_mutation | Gene does not exist for variant at index 288 in batch 3 2025-08-01 01:31:18,722 | WARNING | pyMut.annotate.actionable_mutation | Unknown oncogenicity for variant at index 288 in batch 3 2025-08-01 01:31:18,722 | WARNING | pyMut.annotate.actionable_mutation | Gene does not exist for variant at index 289 in batch 3 2025-08-01 01:31:18,722 | WARNING | pyMut.annotate.actionable_mutation | Unknown oncogenicity for variant at index 289 in batch 3 2025-08-01 01:31:18,723 | WARNING | pyMut.annotate.actionable_mutation | Gene does not exist for variant at index 290 in batch 3 2025-08-01 01:31:18,723 | WARNING | pyMut.annotate.actionable_mutation | Unknown oncogenicity for variant at index 290 in batch 3 2025-08-01 01:31:18,723 | WARNING | pyMut.annotate.actionable_mutation | Gene does not exist for variant at index 291 in batch 3 2025-08-01 01:31:18,723 | WARNING | pyMut.annotate.actionable_mutation | Unknown oncogenicity for variant at index 291 in batch 3 2025-08-01 01:31:18,724 | WARNING | pyMut.annotate.actionable_mutation | Gene does not exist for variant at index 292 in batch 3 2025-08-01 01:31:18,724 | WARNING | pyMut.annotate.actionable_mutation | Unknown oncogenicity for variant at index 292 in batch 3 2025-08-01 01:31:18,724 | WARNING | pyMut.annotate.actionable_mutation | Gene does not exist for variant at index 293 in batch 3 2025-08-01 01:31:18,724 | WARNING | pyMut.annotate.actionable_mutation | Unknown oncogenicity for variant at index 293 in batch 3 2025-08-01 01:31:18,725 | WARNING | pyMut.annotate.actionable_mutation | Gene does not exist for variant at index 294 in batch 3 2025-08-01 01:31:18,725 | WARNING | pyMut.annotate.actionable_mutation | Unknown oncogenicity for variant at index 294 in batch 3 2025-08-01 01:31:18,726 | WARNING | pyMut.annotate.actionable_mutation | Unknown oncogenicity for variant at index 295 in batch 3 2025-08-01 01:31:18,726 | WARNING | pyMut.annotate.actionable_mutation | Gene does not exist for variant at index 296 in batch 3 2025-08-01 01:31:18,726 | WARNING | pyMut.annotate.actionable_mutation | Unknown oncogenicity for variant at index 296 in batch 3 2025-08-01 01:31:18,726 | WARNING | pyMut.annotate.actionable_mutation | Gene does not exist for variant at index 297 in batch 3 2025-08-01 01:31:18,726 | WARNING | pyMut.annotate.actionable_mutation | Unknown oncogenicity for variant at index 297 in batch 3 2025-08-01 01:31:18,727 | WARNING | pyMut.annotate.actionable_mutation | Gene does not exist for variant at index 298 in batch 3 2025-08-01 01:31:18,727 | WARNING | pyMut.annotate.actionable_mutation | Unknown oncogenicity for variant at index 298 in batch 3 2025-08-01 01:31:18,727 | WARNING | pyMut.annotate.actionable_mutation | Unknown oncogenicity for variant at index 299 in batch 3 2025-08-01 01:31:18,727 | WARNING | pyMut.annotate.actionable_mutation | Gene does not exist for variant at index 300 in batch 3 2025-08-01 01:31:18,727 | WARNING | pyMut.annotate.actionable_mutation | Unknown oncogenicity for variant at index 300 in batch 3 2025-08-01 01:31:18,728 | WARNING | pyMut.annotate.actionable_mutation | Gene does not exist for variant at index 301 in batch 3 2025-08-01 01:31:18,728 | WARNING | pyMut.annotate.actionable_mutation | Unknown oncogenicity for variant at index 301 in batch 3 2025-08-01 01:31:18,728 | WARNING | pyMut.annotate.actionable_mutation | Gene does not exist for variant at index 302 in batch 3 2025-08-01 01:31:18,728 | WARNING | pyMut.annotate.actionable_mutation | Unknown oncogenicity for variant at index 302 in batch 3 2025-08-01 01:31:18,728 | WARNING | pyMut.annotate.actionable_mutation | Gene does not exist for variant at index 303 in batch 3 2025-08-01 01:31:18,729 | WARNING | pyMut.annotate.actionable_mutation | Unknown oncogenicity for variant at index 303 in batch 3 2025-08-01 01:31:18,729 | WARNING | pyMut.annotate.actionable_mutation | Gene does not exist for variant at index 304 in batch 3 2025-08-01 01:31:18,729 | WARNING | pyMut.annotate.actionable_mutation | Unknown oncogenicity for variant at index 304 in batch 3 2025-08-01 01:31:18,732 | WARNING | pyMut.annotate.actionable_mutation | Gene does not exist for variant at index 305 in batch 3 2025-08-01 01:31:18,732 | WARNING | pyMut.annotate.actionable_mutation | Unknown oncogenicity for variant at index 305 in batch 3 2025-08-01 01:31:18,734 | WARNING | pyMut.annotate.actionable_mutation | Gene does not exist for variant at index 306 in batch 3 2025-08-01 01:31:18,734 | WARNING | pyMut.annotate.actionable_mutation | Unknown oncogenicity for variant at index 306 in batch 3 2025-08-01 01:31:18,734 | WARNING | pyMut.annotate.actionable_mutation | Gene does not exist for variant at index 307 in batch 3 2025-08-01 01:31:18,734 | WARNING | pyMut.annotate.actionable_mutation | Unknown oncogenicity for variant at index 307 in batch 3 2025-08-01 01:31:18,735 | WARNING | pyMut.annotate.actionable_mutation | Gene does not exist for variant at index 308 in batch 3 2025-08-01 01:31:18,735 | WARNING | pyMut.annotate.actionable_mutation | Unknown oncogenicity for variant at index 308 in batch 3 2025-08-01 01:31:18,735 | WARNING | pyMut.annotate.actionable_mutation | Gene does not exist for variant at index 309 in batch 3 2025-08-01 01:31:18,735 | WARNING | pyMut.annotate.actionable_mutation | Unknown oncogenicity for variant at index 309 in batch 3 2025-08-01 01:31:18,736 | WARNING | pyMut.annotate.actionable_mutation | Gene does not exist for variant at index 310 in batch 3 2025-08-01 01:31:18,736 | WARNING | pyMut.annotate.actionable_mutation | Unknown oncogenicity for variant at index 310 in batch 3 2025-08-01 01:31:18,736 | WARNING | pyMut.annotate.actionable_mutation | Gene does not exist for variant at index 311 in batch 3 2025-08-01 01:31:18,737 | WARNING | pyMut.annotate.actionable_mutation | Unknown oncogenicity for variant at index 311 in batch 3 2025-08-01 01:31:18,737 | WARNING | pyMut.annotate.actionable_mutation | Unknown oncogenicity for variant at index 318 in batch 3 2025-08-01 01:31:18,737 | WARNING | pyMut.annotate.actionable_mutation | Unknown oncogenicity for variant at index 324 in batch 3 2025-08-01 01:31:18,738 | WARNING | pyMut.annotate.actionable_mutation | Unknown oncogenicity for variant at index 326 in batch 3 2025-08-01 01:31:18,738 | WARNING | pyMut.annotate.actionable_mutation | Gene does not exist for variant at index 327 in batch 3 2025-08-01 01:31:18,738 | WARNING | pyMut.annotate.actionable_mutation | Unknown oncogenicity for variant at index 327 in batch 3 2025-08-01 01:31:18,739 | WARNING | pyMut.annotate.actionable_mutation | Gene does not exist for variant at index 328 in batch 3 2025-08-01 01:31:18,739 | WARNING | pyMut.annotate.actionable_mutation | Unknown oncogenicity for variant at index 328 in batch 3 2025-08-01 01:31:18,739 | WARNING | pyMut.annotate.actionable_mutation | Gene does not exist for variant at index 329 in batch 3 2025-08-01 01:31:18,739 | WARNING | pyMut.annotate.actionable_mutation | Unknown oncogenicity for variant at index 329 in batch 3 2025-08-01 01:31:18,740 | WARNING | pyMut.annotate.actionable_mutation | Gene does not exist for variant at index 330 in batch 3 2025-08-01 01:31:18,742 | WARNING | pyMut.annotate.actionable_mutation | Unknown oncogenicity for variant at index 330 in batch 3 2025-08-01 01:31:18,742 | WARNING | pyMut.annotate.actionable_mutation | Gene does not exist for variant at index 331 in batch 3 2025-08-01 01:31:18,743 | WARNING | pyMut.annotate.actionable_mutation | Unknown oncogenicity for variant at index 331 in batch 3 2025-08-01 01:31:18,743 | WARNING | pyMut.annotate.actionable_mutation | Gene does not exist for variant at index 332 in batch 3 2025-08-01 01:31:18,744 | WARNING | pyMut.annotate.actionable_mutation | Unknown oncogenicity for variant at index 332 in batch 3 2025-08-01 01:31:18,745 | WARNING | pyMut.annotate.actionable_mutation | Gene does not exist for variant at index 333 in batch 3 2025-08-01 01:31:18,745 | WARNING | pyMut.annotate.actionable_mutation | Unknown oncogenicity for variant at index 333 in batch 3 2025-08-01 01:31:18,745 | WARNING | pyMut.annotate.actionable_mutation | Gene does not exist for variant at index 334 in batch 3 2025-08-01 01:31:18,746 | WARNING | pyMut.annotate.actionable_mutation | Unknown oncogenicity for variant at index 334 in batch 3 2025-08-01 01:31:18,746 | WARNING | pyMut.annotate.actionable_mutation | Gene does not exist for variant at index 335 in batch 3 2025-08-01 01:31:18,746 | WARNING | pyMut.annotate.actionable_mutation | Unknown oncogenicity for variant at index 335 in batch 3 2025-08-01 01:31:18,746 | WARNING | pyMut.annotate.actionable_mutation | Gene does not exist for variant at index 336 in batch 3 2025-08-01 01:31:18,747 | WARNING | pyMut.annotate.actionable_mutation | Unknown oncogenicity for variant at index 336 in batch 3 2025-08-01 01:31:18,747 | WARNING | pyMut.annotate.actionable_mutation | Gene does not exist for variant at index 340 in batch 3 2025-08-01 01:31:18,747 | WARNING | pyMut.annotate.actionable_mutation | Unknown oncogenicity for variant at index 340 in batch 3 2025-08-01 01:31:18,748 | WARNING | pyMut.annotate.actionable_mutation | Gene does not exist for variant at index 341 in batch 3 2025-08-01 01:31:18,748 | WARNING | pyMut.annotate.actionable_mutation | Unknown oncogenicity for variant at index 341 in batch 3 2025-08-01 01:31:18,748 | WARNING | pyMut.annotate.actionable_mutation | Gene does not exist for variant at index 342 in batch 3 2025-08-01 01:31:18,748 | WARNING | pyMut.annotate.actionable_mutation | Unknown oncogenicity for variant at index 342 in batch 3 2025-08-01 01:31:18,749 | WARNING | pyMut.annotate.actionable_mutation | Gene does not exist for variant at index 343 in batch 3 2025-08-01 01:31:18,749 | WARNING | pyMut.annotate.actionable_mutation | Unknown oncogenicity for variant at index 343 in batch 3 2025-08-01 01:31:18,749 | WARNING | pyMut.annotate.actionable_mutation | Gene does not exist for variant at index 344 in batch 3 2025-08-01 01:31:18,749 | WARNING | pyMut.annotate.actionable_mutation | Unknown oncogenicity for variant at index 344 in batch 3 2025-08-01 01:31:18,750 | WARNING | pyMut.annotate.actionable_mutation | Gene does not exist for variant at index 345 in batch 3 2025-08-01 01:31:18,750 | WARNING | pyMut.annotate.actionable_mutation | Unknown oncogenicity for variant at index 345 in batch 3 2025-08-01 01:31:18,750 | WARNING | pyMut.annotate.actionable_mutation | Gene does not exist for variant at index 346 in batch 3 2025-08-01 01:31:18,750 | WARNING | pyMut.annotate.actionable_mutation | Unknown oncogenicity for variant at index 346 in batch 3 2025-08-01 01:31:18,751 | WARNING | pyMut.annotate.actionable_mutation | Gene does not exist for variant at index 347 in batch 3 2025-08-01 01:31:18,751 | WARNING | pyMut.annotate.actionable_mutation | Unknown oncogenicity for variant at index 347 in batch 3 2025-08-01 01:31:18,751 | WARNING | pyMut.annotate.actionable_mutation | Gene does not exist for variant at index 348 in batch 3 2025-08-01 01:31:18,751 | WARNING | pyMut.annotate.actionable_mutation | Unknown oncogenicity for variant at index 348 in batch 3 2025-08-01 01:31:18,751 | WARNING | pyMut.annotate.actionable_mutation | Gene does not exist for variant at index 349 in batch 3 2025-08-01 01:31:18,752 | WARNING | pyMut.annotate.actionable_mutation | Unknown oncogenicity for variant at index 349 in batch 3 2025-08-01 01:31:18,752 | WARNING | pyMut.annotate.actionable_mutation | Gene does not exist for variant at index 350 in batch 3 2025-08-01 01:31:18,752 | WARNING | pyMut.annotate.actionable_mutation | Unknown oncogenicity for variant at index 350 in batch 3 2025-08-01 01:31:18,752 | WARNING | pyMut.annotate.actionable_mutation | Gene does not exist for variant at index 351 in batch 3 2025-08-01 01:31:18,753 | WARNING | pyMut.annotate.actionable_mutation | Unknown oncogenicity for variant at index 351 in batch 3 2025-08-01 01:31:18,753 | WARNING | pyMut.annotate.actionable_mutation | Gene does not exist for variant at index 352 in batch 3 2025-08-01 01:31:18,753 | WARNING | pyMut.annotate.actionable_mutation | Unknown oncogenicity for variant at index 352 in batch 3 2025-08-01 01:31:18,753 | WARNING | pyMut.annotate.actionable_mutation | Gene does not exist for variant at index 353 in batch 3 2025-08-01 01:31:18,754 | WARNING | pyMut.annotate.actionable_mutation | Unknown oncogenicity for variant at index 353 in batch 3 2025-08-01 01:31:18,754 | WARNING | pyMut.annotate.actionable_mutation | Gene does not exist for variant at index 354 in batch 3 2025-08-01 01:31:18,754 | WARNING | pyMut.annotate.actionable_mutation | Unknown oncogenicity for variant at index 354 in batch 3 2025-08-01 01:31:18,754 | WARNING | pyMut.annotate.actionable_mutation | Gene does not exist for variant at index 355 in batch 3 2025-08-01 01:31:18,755 | WARNING | pyMut.annotate.actionable_mutation | Unknown oncogenicity for variant at index 355 in batch 3 2025-08-01 01:31:18,755 | WARNING | pyMut.annotate.actionable_mutation | Gene does not exist for variant at index 356 in batch 3 2025-08-01 01:31:18,755 | WARNING | pyMut.annotate.actionable_mutation | Unknown oncogenicity for variant at index 356 in batch 3 2025-08-01 01:31:18,757 | WARNING | pyMut.annotate.actionable_mutation | Gene does not exist for variant at index 357 in batch 3 2025-08-01 01:31:18,758 | WARNING | pyMut.annotate.actionable_mutation | Unknown oncogenicity for variant at index 357 in batch 3 2025-08-01 01:31:18,758 | WARNING | pyMut.annotate.actionable_mutation | Gene does not exist for variant at index 358 in batch 3 2025-08-01 01:31:18,759 | WARNING | pyMut.annotate.actionable_mutation | Unknown oncogenicity for variant at index 358 in batch 3 2025-08-01 01:31:18,759 | WARNING | pyMut.annotate.actionable_mutation | Gene does not exist for variant at index 359 in batch 3 2025-08-01 01:31:18,760 | WARNING | pyMut.annotate.actionable_mutation | Unknown oncogenicity for variant at index 359 in batch 3 2025-08-01 01:31:18,760 | WARNING | pyMut.annotate.actionable_mutation | Unknown oncogenicity for variant at index 362 in batch 3 2025-08-01 01:31:18,760 | WARNING | pyMut.annotate.actionable_mutation | Gene does not exist for variant at index 363 in batch 3 2025-08-01 01:31:18,761 | WARNING | pyMut.annotate.actionable_mutation | Unknown oncogenicity for variant at index 363 in batch 3 2025-08-01 01:31:18,761 | WARNING | pyMut.annotate.actionable_mutation | Gene does not exist for variant at index 364 in batch 3 2025-08-01 01:31:18,761 | WARNING | pyMut.annotate.actionable_mutation | Unknown oncogenicity for variant at index 364 in batch 3 2025-08-01 01:31:18,761 | WARNING | pyMut.annotate.actionable_mutation | Gene does not exist for variant at index 365 in batch 3 2025-08-01 01:31:18,762 | WARNING | pyMut.annotate.actionable_mutation | Unknown oncogenicity for variant at index 365 in batch 3 2025-08-01 01:31:18,762 | WARNING | pyMut.annotate.actionable_mutation | Gene does not exist for variant at index 366 in batch 3 2025-08-01 01:31:18,762 | WARNING | pyMut.annotate.actionable_mutation | Unknown oncogenicity for variant at index 366 in batch 3 2025-08-01 01:31:18,762 | WARNING | pyMut.annotate.actionable_mutation | Gene does not exist for variant at index 367 in batch 3 2025-08-01 01:31:18,763 | WARNING | pyMut.annotate.actionable_mutation | Unknown oncogenicity for variant at index 367 in batch 3 2025-08-01 01:31:18,763 | WARNING | pyMut.annotate.actionable_mutation | Gene does not exist for variant at index 368 in batch 3 2025-08-01 01:31:18,763 | WARNING | pyMut.annotate.actionable_mutation | Unknown oncogenicity for variant at index 368 in batch 3 2025-08-01 01:31:18,763 | WARNING | pyMut.annotate.actionable_mutation | Gene does not exist for variant at index 369 in batch 3 2025-08-01 01:31:18,764 | WARNING | pyMut.annotate.actionable_mutation | Unknown oncogenicity for variant at index 369 in batch 3 2025-08-01 01:31:18,764 | WARNING | pyMut.annotate.actionable_mutation | Gene does not exist for variant at index 370 in batch 3 2025-08-01 01:31:18,766 | WARNING | pyMut.annotate.actionable_mutation | Unknown oncogenicity for variant at index 370 in batch 3 2025-08-01 01:31:18,767 | WARNING | pyMut.annotate.actionable_mutation | Gene does not exist for variant at index 371 in batch 3 2025-08-01 01:31:18,767 | WARNING | pyMut.annotate.actionable_mutation | Unknown oncogenicity for variant at index 371 in batch 3 2025-08-01 01:31:18,767 | WARNING | pyMut.annotate.actionable_mutation | Gene does not exist for variant at index 372 in batch 3 2025-08-01 01:31:18,769 | WARNING | pyMut.annotate.actionable_mutation | Unknown oncogenicity for variant at index 372 in batch 3 2025-08-01 01:31:18,769 | WARNING | pyMut.annotate.actionable_mutation | Gene does not exist for variant at index 373 in batch 3 2025-08-01 01:31:18,770 | WARNING | pyMut.annotate.actionable_mutation | Unknown oncogenicity for variant at index 373 in batch 3 2025-08-01 01:31:18,770 | WARNING | pyMut.annotate.actionable_mutation | Gene does not exist for variant at index 374 in batch 3 2025-08-01 01:31:18,770 | WARNING | pyMut.annotate.actionable_mutation | Unknown oncogenicity for variant at index 374 in batch 3 2025-08-01 01:31:18,771 | WARNING | pyMut.annotate.actionable_mutation | Gene does not exist for variant at index 375 in batch 3 2025-08-01 01:31:18,771 | WARNING | pyMut.annotate.actionable_mutation | Unknown oncogenicity for variant at index 375 in batch 3 2025-08-01 01:31:18,771 | WARNING | pyMut.annotate.actionable_mutation | Gene does not exist for variant at index 376 in batch 3 2025-08-01 01:31:18,772 | WARNING | pyMut.annotate.actionable_mutation | Unknown oncogenicity for variant at index 376 in batch 3 2025-08-01 01:31:18,772 | WARNING | pyMut.annotate.actionable_mutation | Gene does not exist for variant at index 377 in batch 3 2025-08-01 01:31:18,773 | WARNING | pyMut.annotate.actionable_mutation | Unknown oncogenicity for variant at index 377 in batch 3 2025-08-01 01:31:18,773 | WARNING | pyMut.annotate.actionable_mutation | Gene does not exist for variant at index 378 in batch 3 2025-08-01 01:31:18,773 | WARNING | pyMut.annotate.actionable_mutation | Unknown oncogenicity for variant at index 378 in batch 3 2025-08-01 01:31:18,773 | WARNING | pyMut.annotate.actionable_mutation | Gene does not exist for variant at index 379 in batch 3 2025-08-01 01:31:18,773 | WARNING | pyMut.annotate.actionable_mutation | Unknown oncogenicity for variant at index 379 in batch 3 2025-08-01 01:31:18,774 | WARNING | pyMut.annotate.actionable_mutation | Gene does not exist for variant at index 380 in batch 3 2025-08-01 01:31:18,774 | WARNING | pyMut.annotate.actionable_mutation | Unknown oncogenicity for variant at index 380 in batch 3 2025-08-01 01:31:18,774 | WARNING | pyMut.annotate.actionable_mutation | Gene does not exist for variant at index 381 in batch 3 2025-08-01 01:31:18,775 | WARNING | pyMut.annotate.actionable_mutation | Unknown oncogenicity for variant at index 381 in batch 3 2025-08-01 01:31:18,775 | WARNING | pyMut.annotate.actionable_mutation | Gene does not exist for variant at index 382 in batch 3 2025-08-01 01:31:18,776 | WARNING | pyMut.annotate.actionable_mutation | Unknown oncogenicity for variant at index 382 in batch 3 2025-08-01 01:31:18,776 | WARNING | pyMut.annotate.actionable_mutation | Gene does not exist for variant at index 383 in batch 3 2025-08-01 01:31:18,776 | WARNING | pyMut.annotate.actionable_mutation | Unknown oncogenicity for variant at index 383 in batch 3 2025-08-01 01:31:18,776 | WARNING | pyMut.annotate.actionable_mutation | Gene does not exist for variant at index 384 in batch 3 2025-08-01 01:31:18,776 | WARNING | pyMut.annotate.actionable_mutation | Unknown oncogenicity for variant at index 384 in batch 3 2025-08-01 01:31:18,777 | WARNING | pyMut.annotate.actionable_mutation | Gene does not exist for variant at index 385 in batch 3 2025-08-01 01:31:18,777 | WARNING | pyMut.annotate.actionable_mutation | Unknown oncogenicity for variant at index 385 in batch 3 2025-08-01 01:31:18,777 | WARNING | pyMut.annotate.actionable_mutation | Gene does not exist for variant at index 386 in batch 3 2025-08-01 01:31:18,777 | WARNING | pyMut.annotate.actionable_mutation | Unknown oncogenicity for variant at index 386 in batch 3 2025-08-01 01:31:18,777 | WARNING | pyMut.annotate.actionable_mutation | Gene does not exist for variant at index 387 in batch 3 2025-08-01 01:31:18,778 | WARNING | pyMut.annotate.actionable_mutation | Unknown oncogenicity for variant at index 387 in batch 3 2025-08-01 01:31:18,778 | WARNING | pyMut.annotate.actionable_mutation | Gene does not exist for variant at index 388 in batch 3 2025-08-01 01:31:18,779 | WARNING | pyMut.annotate.actionable_mutation | Unknown oncogenicity for variant at index 388 in batch 3 2025-08-01 01:31:18,779 | WARNING | pyMut.annotate.actionable_mutation | Unknown oncogenicity for variant at index 389 in batch 3 2025-08-01 01:31:18,779 | WARNING | pyMut.annotate.actionable_mutation | Gene does not exist for variant at index 400 in batch 3 2025-08-01 01:31:18,779 | WARNING | pyMut.annotate.actionable_mutation | Unknown oncogenicity for variant at index 400 in batch 3 2025-08-01 01:31:18,779 | WARNING | pyMut.annotate.actionable_mutation | Gene does not exist for variant at index 401 in batch 3 2025-08-01 01:31:18,780 | WARNING | pyMut.annotate.actionable_mutation | Unknown oncogenicity for variant at index 401 in batch 3 2025-08-01 01:31:18,780 | WARNING | pyMut.annotate.actionable_mutation | Gene does not exist for variant at index 402 in batch 3 2025-08-01 01:31:18,780 | WARNING | pyMut.annotate.actionable_mutation | Unknown oncogenicity for variant at index 402 in batch 3 2025-08-01 01:31:18,780 | WARNING | pyMut.annotate.actionable_mutation | Gene does not exist for variant at index 403 in batch 3 2025-08-01 01:31:18,781 | WARNING | pyMut.annotate.actionable_mutation | Unknown oncogenicity for variant at index 403 in batch 3 2025-08-01 01:31:18,781 | WARNING | pyMut.annotate.actionable_mutation | Gene does not exist for variant at index 404 in batch 3 2025-08-01 01:31:18,781 | WARNING | pyMut.annotate.actionable_mutation | Unknown oncogenicity for variant at index 404 in batch 3 2025-08-01 01:31:18,781 | WARNING | pyMut.annotate.actionable_mutation | Gene does not exist for variant at index 405 in batch 3 2025-08-01 01:31:18,783 | WARNING | pyMut.annotate.actionable_mutation | Unknown oncogenicity for variant at index 405 in batch 3 2025-08-01 01:31:18,784 | WARNING | pyMut.annotate.actionable_mutation | Gene does not exist for variant at index 406 in batch 3 2025-08-01 01:31:18,784 | WARNING | pyMut.annotate.actionable_mutation | Unknown oncogenicity for variant at index 406 in batch 3 2025-08-01 01:31:18,785 | WARNING | pyMut.annotate.actionable_mutation | Gene does not exist for variant at index 407 in batch 3 2025-08-01 01:31:18,785 | WARNING | pyMut.annotate.actionable_mutation | Unknown oncogenicity for variant at index 407 in batch 3 2025-08-01 01:31:18,785 | WARNING | pyMut.annotate.actionable_mutation | Gene does not exist for variant at index 408 in batch 3 2025-08-01 01:31:18,786 | WARNING | pyMut.annotate.actionable_mutation | Unknown oncogenicity for variant at index 408 in batch 3 2025-08-01 01:31:18,786 | WARNING | pyMut.annotate.actionable_mutation | Gene does not exist for variant at index 409 in batch 3 2025-08-01 01:31:18,786 | WARNING | pyMut.annotate.actionable_mutation | Unknown oncogenicity for variant at index 409 in batch 3 2025-08-01 01:31:18,786 | WARNING | pyMut.annotate.actionable_mutation | Gene does not exist for variant at index 410 in batch 3 2025-08-01 01:31:18,786 | WARNING | pyMut.annotate.actionable_mutation | Unknown oncogenicity for variant at index 410 in batch 3 2025-08-01 01:31:18,787 | WARNING | pyMut.annotate.actionable_mutation | Gene does not exist for variant at index 411 in batch 3 2025-08-01 01:31:18,787 | WARNING | pyMut.annotate.actionable_mutation | Unknown oncogenicity for variant at index 411 in batch 3 2025-08-01 01:31:18,787 | WARNING | pyMut.annotate.actionable_mutation | Gene does not exist for variant at index 412 in batch 3 2025-08-01 01:31:18,787 | WARNING | pyMut.annotate.actionable_mutation | Unknown oncogenicity for variant at index 412 in batch 3 2025-08-01 01:31:18,787 | WARNING | pyMut.annotate.actionable_mutation | Gene does not exist for variant at index 413 in batch 3 2025-08-01 01:31:18,787 | WARNING | pyMut.annotate.actionable_mutation | Unknown oncogenicity for variant at index 413 in batch 3 2025-08-01 01:31:18,788 | WARNING | pyMut.annotate.actionable_mutation | Gene does not exist for variant at index 414 in batch 3 2025-08-01 01:31:18,788 | WARNING | pyMut.annotate.actionable_mutation | Unknown oncogenicity for variant at index 414 in batch 3 2025-08-01 01:31:18,789 | WARNING | pyMut.annotate.actionable_mutation | Gene does not exist for variant at index 415 in batch 3 2025-08-01 01:31:18,789 | WARNING | pyMut.annotate.actionable_mutation | Unknown oncogenicity for variant at index 415 in batch 3 2025-08-01 01:31:18,789 | WARNING | pyMut.annotate.actionable_mutation | Gene does not exist for variant at index 416 in batch 3 2025-08-01 01:31:18,789 | WARNING | pyMut.annotate.actionable_mutation | Unknown oncogenicity for variant at index 416 in batch 3 2025-08-01 01:31:18,790 | WARNING | pyMut.annotate.actionable_mutation | Gene does not exist for variant at index 417 in batch 3 2025-08-01 01:31:18,790 | WARNING | pyMut.annotate.actionable_mutation | Unknown oncogenicity for variant at index 417 in batch 3 2025-08-01 01:31:18,790 | WARNING | pyMut.annotate.actionable_mutation | Gene does not exist for variant at index 418 in batch 3 2025-08-01 01:31:18,790 | WARNING | pyMut.annotate.actionable_mutation | Unknown oncogenicity for variant at index 418 in batch 3 2025-08-01 01:31:18,790 | WARNING | pyMut.annotate.actionable_mutation | Gene does not exist for variant at index 419 in batch 3 2025-08-01 01:31:18,791 | WARNING | pyMut.annotate.actionable_mutation | Unknown oncogenicity for variant at index 419 in batch 3 2025-08-01 01:31:18,791 | WARNING | pyMut.annotate.actionable_mutation | Gene does not exist for variant at index 420 in batch 3 2025-08-01 01:31:18,791 | WARNING | pyMut.annotate.actionable_mutation | Unknown oncogenicity for variant at index 420 in batch 3 2025-08-01 01:31:18,791 | WARNING | pyMut.annotate.actionable_mutation | Gene does not exist for variant at index 421 in batch 3 2025-08-01 01:31:18,791 | WARNING | pyMut.annotate.actionable_mutation | Unknown oncogenicity for variant at index 421 in batch 3 2025-08-01 01:31:18,791 | WARNING | pyMut.annotate.actionable_mutation | Gene does not exist for variant at index 422 in batch 3 2025-08-01 01:31:18,792 | WARNING | pyMut.annotate.actionable_mutation | Unknown oncogenicity for variant at index 422 in batch 3 2025-08-01 01:31:18,792 | WARNING | pyMut.annotate.actionable_mutation | Gene does not exist for variant at index 423 in batch 3 2025-08-01 01:31:18,792 | WARNING | pyMut.annotate.actionable_mutation | Unknown oncogenicity for variant at index 423 in batch 3 2025-08-01 01:31:18,792 | WARNING | pyMut.annotate.actionable_mutation | Gene does not exist for variant at index 424 in batch 3 2025-08-01 01:31:18,792 | WARNING | pyMut.annotate.actionable_mutation | Unknown oncogenicity for variant at index 424 in batch 3 2025-08-01 01:31:18,793 | WARNING | pyMut.annotate.actionable_mutation | Gene does not exist for variant at index 425 in batch 3 2025-08-01 01:31:18,793 | WARNING | pyMut.annotate.actionable_mutation | Unknown oncogenicity for variant at index 425 in batch 3 2025-08-01 01:31:18,793 | WARNING | pyMut.annotate.actionable_mutation | Gene does not exist for variant at index 426 in batch 3 2025-08-01 01:31:18,793 | WARNING | pyMut.annotate.actionable_mutation | Unknown oncogenicity for variant at index 426 in batch 3 2025-08-01 01:31:18,793 | WARNING | pyMut.annotate.actionable_mutation | Gene does not exist for variant at index 427 in batch 3 2025-08-01 01:31:18,793 | WARNING | pyMut.annotate.actionable_mutation | Unknown oncogenicity for variant at index 427 in batch 3 2025-08-01 01:31:18,794 | WARNING | pyMut.annotate.actionable_mutation | Gene does not exist for variant at index 428 in batch 3 2025-08-01 01:31:18,795 | WARNING | pyMut.annotate.actionable_mutation | Unknown oncogenicity for variant at index 428 in batch 3 2025-08-01 01:31:18,795 | WARNING | pyMut.annotate.actionable_mutation | Gene does not exist for variant at index 429 in batch 3 2025-08-01 01:31:18,796 | WARNING | pyMut.annotate.actionable_mutation | Unknown oncogenicity for variant at index 429 in batch 3 2025-08-01 01:31:18,796 | WARNING | pyMut.annotate.actionable_mutation | Gene does not exist for variant at index 430 in batch 3 2025-08-01 01:31:18,796 | WARNING | pyMut.annotate.actionable_mutation | Unknown oncogenicity for variant at index 430 in batch 3 2025-08-01 01:31:18,796 | WARNING | pyMut.annotate.actionable_mutation | Gene does not exist for variant at index 431 in batch 3 2025-08-01 01:31:18,797 | WARNING | pyMut.annotate.actionable_mutation | Unknown oncogenicity for variant at index 431 in batch 3 2025-08-01 01:31:18,797 | WARNING | pyMut.annotate.actionable_mutation | Gene does not exist for variant at index 432 in batch 3 2025-08-01 01:31:18,797 | WARNING | pyMut.annotate.actionable_mutation | Unknown oncogenicity for variant at index 432 in batch 3 2025-08-01 01:31:18,797 | WARNING | pyMut.annotate.actionable_mutation | Gene does not exist for variant at index 433 in batch 3 2025-08-01 01:31:18,797 | WARNING | pyMut.annotate.actionable_mutation | Unknown oncogenicity for variant at index 433 in batch 3 2025-08-01 01:31:18,798 | WARNING | pyMut.annotate.actionable_mutation | Gene does not exist for variant at index 434 in batch 3 2025-08-01 01:31:18,798 | WARNING | pyMut.annotate.actionable_mutation | Unknown oncogenicity for variant at index 434 in batch 3 2025-08-01 01:31:18,798 | WARNING | pyMut.annotate.actionable_mutation | Gene does not exist for variant at index 435 in batch 3 2025-08-01 01:31:18,798 | WARNING | pyMut.annotate.actionable_mutation | Unknown oncogenicity for variant at index 435 in batch 3 2025-08-01 01:31:18,799 | WARNING | pyMut.annotate.actionable_mutation | Gene does not exist for variant at index 436 in batch 3 2025-08-01 01:31:18,799 | WARNING | pyMut.annotate.actionable_mutation | Unknown oncogenicity for variant at index 436 in batch 3 2025-08-01 01:31:18,800 | WARNING | pyMut.annotate.actionable_mutation | Gene does not exist for variant at index 437 in batch 3 2025-08-01 01:31:18,800 | WARNING | pyMut.annotate.actionable_mutation | Unknown oncogenicity for variant at index 437 in batch 3 2025-08-01 01:31:18,800 | WARNING | pyMut.annotate.actionable_mutation | Gene does not exist for variant at index 438 in batch 3 2025-08-01 01:31:18,800 | WARNING | pyMut.annotate.actionable_mutation | Unknown oncogenicity for variant at index 438 in batch 3 2025-08-01 01:31:18,801 | WARNING | pyMut.annotate.actionable_mutation | Gene does not exist for variant at index 439 in batch 3 2025-08-01 01:31:18,801 | WARNING | pyMut.annotate.actionable_mutation | Unknown oncogenicity for variant at index 439 in batch 3 2025-08-01 01:31:18,801 | WARNING | pyMut.annotate.actionable_mutation | Gene does not exist for variant at index 440 in batch 3 2025-08-01 01:31:18,801 | WARNING | pyMut.annotate.actionable_mutation | Unknown oncogenicity for variant at index 440 in batch 3 2025-08-01 01:31:18,801 | WARNING | pyMut.annotate.actionable_mutation | Gene does not exist for variant at index 441 in batch 3 2025-08-01 01:31:18,802 | WARNING | pyMut.annotate.actionable_mutation | Unknown oncogenicity for variant at index 441 in batch 3 2025-08-01 01:31:18,802 | WARNING | pyMut.annotate.actionable_mutation | Gene does not exist for variant at index 442 in batch 3 2025-08-01 01:31:18,802 | WARNING | pyMut.annotate.actionable_mutation | Unknown oncogenicity for variant at index 442 in batch 3 2025-08-01 01:31:18,802 | WARNING | pyMut.annotate.actionable_mutation | Unknown oncogenicity for variant at index 443 in batch 3 2025-08-01 01:31:18,802 | WARNING | pyMut.annotate.actionable_mutation | Gene does not exist for variant at index 444 in batch 3 2025-08-01 01:31:18,803 | WARNING | pyMut.annotate.actionable_mutation | Unknown oncogenicity for variant at index 444 in batch 3 2025-08-01 01:31:18,803 | WARNING | pyMut.annotate.actionable_mutation | Gene does not exist for variant at index 445 in batch 3 2025-08-01 01:31:18,803 | WARNING | pyMut.annotate.actionable_mutation | Unknown oncogenicity for variant at index 445 in batch 3 2025-08-01 01:31:18,803 | WARNING | pyMut.annotate.actionable_mutation | Gene does not exist for variant at index 446 in batch 3 2025-08-01 01:31:18,803 | WARNING | pyMut.annotate.actionable_mutation | Unknown oncogenicity for variant at index 446 in batch 3 2025-08-01 01:31:18,804 | WARNING | pyMut.annotate.actionable_mutation | Gene does not exist for variant at index 447 in batch 3 2025-08-01 01:31:18,804 | WARNING | pyMut.annotate.actionable_mutation | Unknown oncogenicity for variant at index 447 in batch 3 2025-08-01 01:31:18,805 | WARNING | pyMut.annotate.actionable_mutation | Gene does not exist for variant at index 448 in batch 3 2025-08-01 01:31:18,805 | WARNING | pyMut.annotate.actionable_mutation | Unknown oncogenicity for variant at index 448 in batch 3 2025-08-01 01:31:18,806 | WARNING | pyMut.annotate.actionable_mutation | Gene does not exist for variant at index 449 in batch 3 2025-08-01 01:31:18,806 | WARNING | pyMut.annotate.actionable_mutation | Unknown oncogenicity for variant at index 449 in batch 3 2025-08-01 01:31:18,807 | WARNING | pyMut.annotate.actionable_mutation | Gene does not exist for variant at index 450 in batch 3 2025-08-01 01:31:18,807 | WARNING | pyMut.annotate.actionable_mutation | Unknown oncogenicity for variant at index 450 in batch 3 2025-08-01 01:31:18,807 | WARNING | pyMut.annotate.actionable_mutation | Gene does not exist for variant at index 451 in batch 3 2025-08-01 01:31:18,807 | WARNING | pyMut.annotate.actionable_mutation | Unknown oncogenicity for variant at index 451 in batch 3 2025-08-01 01:31:18,808 | WARNING | pyMut.annotate.actionable_mutation | Gene does not exist for variant at index 452 in batch 3 2025-08-01 01:31:18,808 | WARNING | pyMut.annotate.actionable_mutation | Unknown oncogenicity for variant at index 452 in batch 3 2025-08-01 01:31:18,809 | WARNING | pyMut.annotate.actionable_mutation | Gene does not exist for variant at index 453 in batch 3 2025-08-01 01:31:18,809 | WARNING | pyMut.annotate.actionable_mutation | Unknown oncogenicity for variant at index 453 in batch 3 2025-08-01 01:31:18,809 | WARNING | pyMut.annotate.actionable_mutation | Gene does not exist for variant at index 454 in batch 3 2025-08-01 01:31:18,810 | WARNING | pyMut.annotate.actionable_mutation | Unknown oncogenicity for variant at index 454 in batch 3 2025-08-01 01:31:18,810 | WARNING | pyMut.annotate.actionable_mutation | Unknown oncogenicity for variant at index 456 in batch 3 2025-08-01 01:31:18,810 | WARNING | pyMut.annotate.actionable_mutation | Gene does not exist for variant at index 457 in batch 3 2025-08-01 01:31:18,810 | WARNING | pyMut.annotate.actionable_mutation | Unknown oncogenicity for variant at index 457 in batch 3 2025-08-01 01:31:18,811 | WARNING | pyMut.annotate.actionable_mutation | Gene does not exist for variant at index 458 in batch 3 2025-08-01 01:31:18,811 | WARNING | pyMut.annotate.actionable_mutation | Unknown oncogenicity for variant at index 458 in batch 3 2025-08-01 01:31:18,811 | WARNING | pyMut.annotate.actionable_mutation | Gene does not exist for variant at index 459 in batch 3 2025-08-01 01:31:18,812 | WARNING | pyMut.annotate.actionable_mutation | Unknown oncogenicity for variant at index 459 in batch 3 2025-08-01 01:31:18,812 | WARNING | pyMut.annotate.actionable_mutation | Gene does not exist for variant at index 460 in batch 3 2025-08-01 01:31:18,812 | WARNING | pyMut.annotate.actionable_mutation | Unknown oncogenicity for variant at index 460 in batch 3 2025-08-01 01:31:18,813 | WARNING | pyMut.annotate.actionable_mutation | Gene does not exist for variant at index 461 in batch 3 2025-08-01 01:31:18,813 | WARNING | pyMut.annotate.actionable_mutation | Unknown oncogenicity for variant at index 461 in batch 3 2025-08-01 01:31:18,813 | WARNING | pyMut.annotate.actionable_mutation | Unknown oncogenicity for variant at index 462 in batch 3 2025-08-01 01:31:18,813 | WARNING | pyMut.annotate.actionable_mutation | Gene does not exist for variant at index 463 in batch 3 2025-08-01 01:31:18,813 | WARNING | pyMut.annotate.actionable_mutation | Unknown oncogenicity for variant at index 463 in batch 3 2025-08-01 01:31:18,814 | WARNING | pyMut.annotate.actionable_mutation | Gene does not exist for variant at index 464 in batch 3 2025-08-01 01:31:18,814 | WARNING | pyMut.annotate.actionable_mutation | Unknown oncogenicity for variant at index 464 in batch 3 2025-08-01 01:31:18,814 | WARNING | pyMut.annotate.actionable_mutation | Unknown oncogenicity for variant at index 465 in batch 3 2025-08-01 01:31:18,814 | WARNING | pyMut.annotate.actionable_mutation | Gene does not exist for variant at index 466 in batch 3 2025-08-01 01:31:18,814 | WARNING | pyMut.annotate.actionable_mutation | Unknown oncogenicity for variant at index 466 in batch 3 2025-08-01 01:31:18,815 | WARNING | pyMut.annotate.actionable_mutation | Gene does not exist for variant at index 467 in batch 3 2025-08-01 01:31:18,815 | WARNING | pyMut.annotate.actionable_mutation | Unknown oncogenicity for variant at index 467 in batch 3 2025-08-01 01:31:18,815 | WARNING | pyMut.annotate.actionable_mutation | Gene does not exist for variant at index 468 in batch 3 2025-08-01 01:31:18,815 | WARNING | pyMut.annotate.actionable_mutation | Unknown oncogenicity for variant at index 468 in batch 3 2025-08-01 01:31:18,815 | WARNING | pyMut.annotate.actionable_mutation | Gene does not exist for variant at index 469 in batch 3 2025-08-01 01:31:18,816 | WARNING | pyMut.annotate.actionable_mutation | Unknown oncogenicity for variant at index 469 in batch 3 2025-08-01 01:31:18,817 | WARNING | pyMut.annotate.actionable_mutation | Gene does not exist for variant at index 470 in batch 3 2025-08-01 01:31:18,818 | WARNING | pyMut.annotate.actionable_mutation | Unknown oncogenicity for variant at index 470 in batch 3 2025-08-01 01:31:18,819 | WARNING | pyMut.annotate.actionable_mutation | Gene does not exist for variant at index 471 in batch 3 2025-08-01 01:31:18,819 | WARNING | pyMut.annotate.actionable_mutation | Unknown oncogenicity for variant at index 471 in batch 3 2025-08-01 01:31:18,820 | WARNING | pyMut.annotate.actionable_mutation | Gene does not exist for variant at index 472 in batch 3 2025-08-01 01:31:18,820 | WARNING | pyMut.annotate.actionable_mutation | Unknown oncogenicity for variant at index 472 in batch 3 2025-08-01 01:31:18,820 | WARNING | pyMut.annotate.actionable_mutation | Gene does not exist for variant at index 473 in batch 3 2025-08-01 01:31:18,820 | WARNING | pyMut.annotate.actionable_mutation | Unknown oncogenicity for variant at index 473 in batch 3 2025-08-01 01:31:18,821 | WARNING | pyMut.annotate.actionable_mutation | Gene does not exist for variant at index 476 in batch 3 2025-08-01 01:31:18,821 | WARNING | pyMut.annotate.actionable_mutation | Unknown oncogenicity for variant at index 476 in batch 3 2025-08-01 01:31:18,821 | WARNING | pyMut.annotate.actionable_mutation | Unknown oncogenicity for variant at index 479 in batch 3 2025-08-01 01:31:18,821 | WARNING | pyMut.annotate.actionable_mutation | Unknown oncogenicity for variant at index 480 in batch 3 2025-08-01 01:31:18,822 | WARNING | pyMut.annotate.actionable_mutation | Gene does not exist for variant at index 482 in batch 3 2025-08-01 01:31:18,822 | WARNING | pyMut.annotate.actionable_mutation | Unknown oncogenicity for variant at index 482 in batch 3 2025-08-01 01:31:18,822 | WARNING | pyMut.annotate.actionable_mutation | Gene does not exist for variant at index 483 in batch 3 2025-08-01 01:31:18,822 | WARNING | pyMut.annotate.actionable_mutation | Unknown oncogenicity for variant at index 483 in batch 3 2025-08-01 01:31:18,823 | WARNING | pyMut.annotate.actionable_mutation | Gene does not exist for variant at index 484 in batch 3 2025-08-01 01:31:18,823 | WARNING | pyMut.annotate.actionable_mutation | Unknown oncogenicity for variant at index 484 in batch 3 2025-08-01 01:31:18,823 | WARNING | pyMut.annotate.actionable_mutation | Gene does not exist for variant at index 485 in batch 3 2025-08-01 01:31:18,823 | WARNING | pyMut.annotate.actionable_mutation | Unknown oncogenicity for variant at index 485 in batch 3 2025-08-01 01:31:18,823 | WARNING | pyMut.annotate.actionable_mutation | Gene does not exist for variant at index 486 in batch 3 2025-08-01 01:31:18,824 | WARNING | pyMut.annotate.actionable_mutation | Unknown oncogenicity for variant at index 486 in batch 3 2025-08-01 01:31:18,824 | WARNING | pyMut.annotate.actionable_mutation | Gene does not exist for variant at index 487 in batch 3 2025-08-01 01:31:18,824 | WARNING | pyMut.annotate.actionable_mutation | Unknown oncogenicity for variant at index 487 in batch 3 2025-08-01 01:31:18,824 | WARNING | pyMut.annotate.actionable_mutation | Unknown oncogenicity for variant at index 488 in batch 3 2025-08-01 01:31:18,825 | WARNING | pyMut.annotate.actionable_mutation | Gene does not exist for variant at index 489 in batch 3 2025-08-01 01:31:18,826 | WARNING | pyMut.annotate.actionable_mutation | Unknown oncogenicity for variant at index 489 in batch 3 2025-08-01 01:31:18,826 | WARNING | pyMut.annotate.actionable_mutation | Gene does not exist for variant at index 490 in batch 3 2025-08-01 01:31:18,826 | WARNING | pyMut.annotate.actionable_mutation | Unknown oncogenicity for variant at index 490 in batch 3 2025-08-01 01:31:18,826 | WARNING | pyMut.annotate.actionable_mutation | Gene does not exist for variant at index 491 in batch 3 2025-08-01 01:31:18,827 | WARNING | pyMut.annotate.actionable_mutation | Unknown oncogenicity for variant at index 491 in batch 3 2025-08-01 01:31:18,827 | WARNING | pyMut.annotate.actionable_mutation | Gene does not exist for variant at index 492 in batch 3 2025-08-01 01:31:18,827 | WARNING | pyMut.annotate.actionable_mutation | Unknown oncogenicity for variant at index 492 in batch 3 2025-08-01 01:31:18,827 | WARNING | pyMut.annotate.actionable_mutation | Gene does not exist for variant at index 493 in batch 3 2025-08-01 01:31:18,827 | WARNING | pyMut.annotate.actionable_mutation | Unknown oncogenicity for variant at index 493 in batch 3 2025-08-01 01:31:18,828 | WARNING | pyMut.annotate.actionable_mutation | Gene does not exist for variant at index 494 in batch 3 2025-08-01 01:31:18,828 | WARNING | pyMut.annotate.actionable_mutation | Unknown oncogenicity for variant at index 494 in batch 3 2025-08-01 01:31:18,828 | WARNING | pyMut.annotate.actionable_mutation | Gene does not exist for variant at index 495 in batch 3 2025-08-01 01:31:18,828 | WARNING | pyMut.annotate.actionable_mutation | Unknown oncogenicity for variant at index 495 in batch 3 2025-08-01 01:31:18,828 | WARNING | pyMut.annotate.actionable_mutation | Gene does not exist for variant at index 496 in batch 3 2025-08-01 01:31:18,829 | WARNING | pyMut.annotate.actionable_mutation | Unknown oncogenicity for variant at index 496 in batch 3 2025-08-01 01:31:18,829 | WARNING | pyMut.annotate.actionable_mutation | Gene does not exist for variant at index 497 in batch 3 2025-08-01 01:31:18,829 | WARNING | pyMut.annotate.actionable_mutation | Unknown oncogenicity for variant at index 497 in batch 3 2025-08-01 01:31:18,829 | WARNING | pyMut.annotate.actionable_mutation | Gene does not exist for variant at index 498 in batch 3 2025-08-01 01:31:18,830 | WARNING | pyMut.annotate.actionable_mutation | Unknown oncogenicity for variant at index 498 in batch 3 2025-08-01 01:31:18,830 | WARNING | pyMut.annotate.actionable_mutation | Gene does not exist for variant at index 499 in batch 3 2025-08-01 01:31:18,831 | WARNING | pyMut.annotate.actionable_mutation | Unknown oncogenicity for variant at index 499 in batch 3 2025-08-01 01:31:18,831 | WARNING | pyMut.annotate.actionable_mutation | Gene does not exist for variant at index 500 in batch 3 2025-08-01 01:31:18,831 | WARNING | pyMut.annotate.actionable_mutation | Unknown oncogenicity for variant at index 500 in batch 3 2025-08-01 01:31:18,832 | WARNING | pyMut.annotate.actionable_mutation | Gene does not exist for variant at index 501 in batch 3 2025-08-01 01:31:18,832 | WARNING | pyMut.annotate.actionable_mutation | Unknown oncogenicity for variant at index 501 in batch 3 2025-08-01 01:31:18,832 | WARNING | pyMut.annotate.actionable_mutation | Gene does not exist for variant at index 502 in batch 3 2025-08-01 01:31:18,833 | WARNING | pyMut.annotate.actionable_mutation | Unknown oncogenicity for variant at index 502 in batch 3 2025-08-01 01:31:18,833 | WARNING | pyMut.annotate.actionable_mutation | Gene does not exist for variant at index 503 in batch 3 2025-08-01 01:31:18,833 | WARNING | pyMut.annotate.actionable_mutation | Unknown oncogenicity for variant at index 503 in batch 3 2025-08-01 01:31:18,833 | WARNING | pyMut.annotate.actionable_mutation | Gene does not exist for variant at index 504 in batch 3 2025-08-01 01:31:18,834 | WARNING | pyMut.annotate.actionable_mutation | Unknown oncogenicity for variant at index 504 in batch 3 2025-08-01 01:31:18,834 | WARNING | pyMut.annotate.actionable_mutation | Gene does not exist for variant at index 505 in batch 3 2025-08-01 01:31:18,834 | WARNING | pyMut.annotate.actionable_mutation | Unknown oncogenicity for variant at index 505 in batch 3 2025-08-01 01:31:18,834 | WARNING | pyMut.annotate.actionable_mutation | Gene does not exist for variant at index 506 in batch 3 2025-08-01 01:31:18,835 | WARNING | pyMut.annotate.actionable_mutation | Unknown oncogenicity for variant at index 506 in batch 3 2025-08-01 01:31:18,835 | WARNING | pyMut.annotate.actionable_mutation | Gene does not exist for variant at index 507 in batch 3 2025-08-01 01:31:18,835 | WARNING | pyMut.annotate.actionable_mutation | Unknown oncogenicity for variant at index 507 in batch 3 2025-08-01 01:31:18,835 | WARNING | pyMut.annotate.actionable_mutation | Gene does not exist for variant at index 508 in batch 3 2025-08-01 01:31:18,835 | WARNING | pyMut.annotate.actionable_mutation | Unknown oncogenicity for variant at index 508 in batch 3 2025-08-01 01:31:18,836 | WARNING | pyMut.annotate.actionable_mutation | Gene does not exist for variant at index 509 in batch 3 2025-08-01 01:31:18,836 | WARNING | pyMut.annotate.actionable_mutation | Unknown oncogenicity for variant at index 509 in batch 3 2025-08-01 01:31:18,836 | WARNING | pyMut.annotate.actionable_mutation | Gene does not exist for variant at index 510 in batch 3 2025-08-01 01:31:18,836 | WARNING | pyMut.annotate.actionable_mutation | Unknown oncogenicity for variant at index 510 in batch 3 2025-08-01 01:31:18,837 | WARNING | pyMut.annotate.actionable_mutation | Unknown oncogenicity for variant at index 511 in batch 3 2025-08-01 01:31:18,837 | WARNING | pyMut.annotate.actionable_mutation | Gene does not exist for variant at index 512 in batch 3 2025-08-01 01:31:18,837 | WARNING | pyMut.annotate.actionable_mutation | Unknown oncogenicity for variant at index 512 in batch 3 2025-08-01 01:31:18,837 | WARNING | pyMut.annotate.actionable_mutation | Unknown oncogenicity for variant at index 513 in batch 3 2025-08-01 01:31:18,838 | WARNING | pyMut.annotate.actionable_mutation | Gene does not exist for variant at index 514 in batch 3 2025-08-01 01:31:18,838 | WARNING | pyMut.annotate.actionable_mutation | Unknown oncogenicity for variant at index 514 in batch 3 2025-08-01 01:31:18,838 | WARNING | pyMut.annotate.actionable_mutation | Gene does not exist for variant at index 515 in batch 3 2025-08-01 01:31:18,839 | WARNING | pyMut.annotate.actionable_mutation | Unknown oncogenicity for variant at index 515 in batch 3 2025-08-01 01:31:18,839 | WARNING | pyMut.annotate.actionable_mutation | Gene does not exist for variant at index 516 in batch 3 2025-08-01 01:31:18,839 | WARNING | pyMut.annotate.actionable_mutation | Unknown oncogenicity for variant at index 516 in batch 3 2025-08-01 01:31:18,839 | WARNING | pyMut.annotate.actionable_mutation | Gene does not exist for variant at index 517 in batch 3 2025-08-01 01:31:18,840 | WARNING | pyMut.annotate.actionable_mutation | Unknown oncogenicity for variant at index 517 in batch 3 2025-08-01 01:31:18,840 | WARNING | pyMut.annotate.actionable_mutation | Gene does not exist for variant at index 518 in batch 3 2025-08-01 01:31:18,841 | WARNING | pyMut.annotate.actionable_mutation | Unknown oncogenicity for variant at index 518 in batch 3 2025-08-01 01:31:18,841 | WARNING | pyMut.annotate.actionable_mutation | Gene does not exist for variant at index 519 in batch 3 2025-08-01 01:31:18,841 | WARNING | pyMut.annotate.actionable_mutation | Unknown oncogenicity for variant at index 519 in batch 3 2025-08-01 01:31:18,842 | WARNING | pyMut.annotate.actionable_mutation | Gene does not exist for variant at index 520 in batch 3 2025-08-01 01:31:18,842 | WARNING | pyMut.annotate.actionable_mutation | Unknown oncogenicity for variant at index 520 in batch 3 2025-08-01 01:31:18,842 | WARNING | pyMut.annotate.actionable_mutation | Gene does not exist for variant at index 521 in batch 3 2025-08-01 01:31:18,843 | WARNING | pyMut.annotate.actionable_mutation | Unknown oncogenicity for variant at index 521 in batch 3 2025-08-01 01:31:18,843 | WARNING | pyMut.annotate.actionable_mutation | Gene does not exist for variant at index 522 in batch 3 2025-08-01 01:31:18,843 | WARNING | pyMut.annotate.actionable_mutation | Unknown oncogenicity for variant at index 522 in batch 3 2025-08-01 01:31:18,844 | WARNING | pyMut.annotate.actionable_mutation | Gene does not exist for variant at index 523 in batch 3 2025-08-01 01:31:18,844 | WARNING | pyMut.annotate.actionable_mutation | Unknown oncogenicity for variant at index 523 in batch 3 2025-08-01 01:31:18,845 | WARNING | pyMut.annotate.actionable_mutation | Gene does not exist for variant at index 524 in batch 3 2025-08-01 01:31:18,845 | WARNING | pyMut.annotate.actionable_mutation | Unknown oncogenicity for variant at index 524 in batch 3 2025-08-01 01:31:18,845 | WARNING | pyMut.annotate.actionable_mutation | Gene does not exist for variant at index 525 in batch 3 2025-08-01 01:31:18,846 | WARNING | pyMut.annotate.actionable_mutation | Unknown oncogenicity for variant at index 525 in batch 3 2025-08-01 01:31:18,846 | WARNING | pyMut.annotate.actionable_mutation | Gene does not exist for variant at index 526 in batch 3 2025-08-01 01:31:18,847 | WARNING | pyMut.annotate.actionable_mutation | Unknown oncogenicity for variant at index 526 in batch 3 2025-08-01 01:31:18,847 | WARNING | pyMut.annotate.actionable_mutation | Gene does not exist for variant at index 527 in batch 3 2025-08-01 01:31:18,848 | WARNING | pyMut.annotate.actionable_mutation | Unknown oncogenicity for variant at index 527 in batch 3 2025-08-01 01:31:18,848 | WARNING | pyMut.annotate.actionable_mutation | Gene does not exist for variant at index 528 in batch 3 2025-08-01 01:31:18,848 | WARNING | pyMut.annotate.actionable_mutation | Unknown oncogenicity for variant at index 528 in batch 3 2025-08-01 01:31:18,848 | WARNING | pyMut.annotate.actionable_mutation | Gene does not exist for variant at index 529 in batch 3 2025-08-01 01:31:18,849 | WARNING | pyMut.annotate.actionable_mutation | Unknown oncogenicity for variant at index 529 in batch 3 2025-08-01 01:31:18,849 | WARNING | pyMut.annotate.actionable_mutation | Gene does not exist for variant at index 530 in batch 3 2025-08-01 01:31:18,849 | WARNING | pyMut.annotate.actionable_mutation | Unknown oncogenicity for variant at index 530 in batch 3 2025-08-01 01:31:18,849 | WARNING | pyMut.annotate.actionable_mutation | Gene does not exist for variant at index 531 in batch 3 2025-08-01 01:31:18,850 | WARNING | pyMut.annotate.actionable_mutation | Unknown oncogenicity for variant at index 531 in batch 3 2025-08-01 01:31:18,850 | WARNING | pyMut.annotate.actionable_mutation | Gene does not exist for variant at index 532 in batch 3 2025-08-01 01:31:18,850 | WARNING | pyMut.annotate.actionable_mutation | Unknown oncogenicity for variant at index 532 in batch 3 2025-08-01 01:31:18,850 | WARNING | pyMut.annotate.actionable_mutation | Gene does not exist for variant at index 533 in batch 3 2025-08-01 01:31:18,851 | WARNING | pyMut.annotate.actionable_mutation | Unknown oncogenicity for variant at index 533 in batch 3 2025-08-01 01:31:18,851 | WARNING | pyMut.annotate.actionable_mutation | Gene does not exist for variant at index 534 in batch 3 2025-08-01 01:31:18,851 | WARNING | pyMut.annotate.actionable_mutation | Unknown oncogenicity for variant at index 534 in batch 3 2025-08-01 01:31:18,852 | WARNING | pyMut.annotate.actionable_mutation | Gene does not exist for variant at index 535 in batch 3 2025-08-01 01:31:18,852 | WARNING | pyMut.annotate.actionable_mutation | Unknown oncogenicity for variant at index 535 in batch 3 2025-08-01 01:31:18,852 | WARNING | pyMut.annotate.actionable_mutation | Gene does not exist for variant at index 537 in batch 3 2025-08-01 01:31:18,852 | WARNING | pyMut.annotate.actionable_mutation | Unknown oncogenicity for variant at index 537 in batch 3 2025-08-01 01:31:18,853 | WARNING | pyMut.annotate.actionable_mutation | Gene does not exist for variant at index 557 in batch 3 2025-08-01 01:31:18,853 | WARNING | pyMut.annotate.actionable_mutation | Unknown oncogenicity for variant at index 557 in batch 3 2025-08-01 01:31:18,853 | WARNING | pyMut.annotate.actionable_mutation | Gene does not exist for variant at index 558 in batch 3 2025-08-01 01:31:18,853 | WARNING | pyMut.annotate.actionable_mutation | Unknown oncogenicity for variant at index 558 in batch 3 2025-08-01 01:31:18,854 | WARNING | pyMut.annotate.actionable_mutation | Gene does not exist for variant at index 559 in batch 3 2025-08-01 01:31:18,854 | WARNING | pyMut.annotate.actionable_mutation | Unknown oncogenicity for variant at index 559 in batch 3 2025-08-01 01:31:18,854 | WARNING | pyMut.annotate.actionable_mutation | Gene does not exist for variant at index 560 in batch 3 2025-08-01 01:31:18,854 | WARNING | pyMut.annotate.actionable_mutation | Unknown oncogenicity for variant at index 560 in batch 3 2025-08-01 01:31:18,855 | WARNING | pyMut.annotate.actionable_mutation | Gene does not exist for variant at index 561 in batch 3 2025-08-01 01:31:18,855 | WARNING | pyMut.annotate.actionable_mutation | Unknown oncogenicity for variant at index 561 in batch 3 2025-08-01 01:31:18,855 | WARNING | pyMut.annotate.actionable_mutation | Gene does not exist for variant at index 562 in batch 3 2025-08-01 01:31:18,855 | WARNING | pyMut.annotate.actionable_mutation | Unknown oncogenicity for variant at index 562 in batch 3 2025-08-01 01:31:18,856 | WARNING | pyMut.annotate.actionable_mutation | Unknown oncogenicity for variant at index 563 in batch 3 2025-08-01 01:31:18,856 | WARNING | pyMut.annotate.actionable_mutation | Gene does not exist for variant at index 564 in batch 3 2025-08-01 01:31:18,856 | WARNING | pyMut.annotate.actionable_mutation | Unknown oncogenicity for variant at index 564 in batch 3 2025-08-01 01:31:18,857 | WARNING | pyMut.annotate.actionable_mutation | Gene does not exist for variant at index 565 in batch 3 2025-08-01 01:31:18,857 | WARNING | pyMut.annotate.actionable_mutation | Unknown oncogenicity for variant at index 565 in batch 3 2025-08-01 01:31:18,858 | WARNING | pyMut.annotate.actionable_mutation | Gene does not exist for variant at index 566 in batch 3 2025-08-01 01:31:18,859 | WARNING | pyMut.annotate.actionable_mutation | Unknown oncogenicity for variant at index 566 in batch 3 2025-08-01 01:31:18,859 | WARNING | pyMut.annotate.actionable_mutation | Gene does not exist for variant at index 567 in batch 3 2025-08-01 01:31:18,860 | WARNING | pyMut.annotate.actionable_mutation | Unknown oncogenicity for variant at index 567 in batch 3 2025-08-01 01:31:18,861 | WARNING | pyMut.annotate.actionable_mutation | Gene does not exist for variant at index 568 in batch 3 2025-08-01 01:31:18,861 | WARNING | pyMut.annotate.actionable_mutation | Unknown oncogenicity for variant at index 568 in batch 3 2025-08-01 01:31:18,861 | WARNING | pyMut.annotate.actionable_mutation | Unknown oncogenicity for variant at index 569 in batch 3 2025-08-01 01:31:18,861 | WARNING | pyMut.annotate.actionable_mutation | Gene does not exist for variant at index 570 in batch 3 2025-08-01 01:31:18,862 | WARNING | pyMut.annotate.actionable_mutation | Unknown oncogenicity for variant at index 570 in batch 3 2025-08-01 01:31:18,862 | WARNING | pyMut.annotate.actionable_mutation | Gene does not exist for variant at index 571 in batch 3 2025-08-01 01:31:18,863 | WARNING | pyMut.annotate.actionable_mutation | Unknown oncogenicity for variant at index 571 in batch 3 2025-08-01 01:31:18,863 | WARNING | pyMut.annotate.actionable_mutation | Gene does not exist for variant at index 572 in batch 3 2025-08-01 01:31:18,863 | WARNING | pyMut.annotate.actionable_mutation | Unknown oncogenicity for variant at index 572 in batch 3 2025-08-01 01:31:18,863 | WARNING | pyMut.annotate.actionable_mutation | Gene does not exist for variant at index 573 in batch 3 2025-08-01 01:31:18,864 | WARNING | pyMut.annotate.actionable_mutation | Unknown oncogenicity for variant at index 573 in batch 3 2025-08-01 01:31:18,864 | WARNING | pyMut.annotate.actionable_mutation | Unknown oncogenicity for variant at index 574 in batch 3 2025-08-01 01:31:18,864 | WARNING | pyMut.annotate.actionable_mutation | Gene does not exist for variant at index 575 in batch 3 2025-08-01 01:31:18,865 | WARNING | pyMut.annotate.actionable_mutation | Unknown oncogenicity for variant at index 575 in batch 3 2025-08-01 01:31:18,865 | WARNING | pyMut.annotate.actionable_mutation | Gene does not exist for variant at index 576 in batch 3 2025-08-01 01:31:18,865 | WARNING | pyMut.annotate.actionable_mutation | Unknown oncogenicity for variant at index 576 in batch 3 2025-08-01 01:31:18,865 | WARNING | pyMut.annotate.actionable_mutation | Gene does not exist for variant at index 577 in batch 3 2025-08-01 01:31:18,865 | WARNING | pyMut.annotate.actionable_mutation | Unknown oncogenicity for variant at index 577 in batch 3 2025-08-01 01:31:18,866 | WARNING | pyMut.annotate.actionable_mutation | Gene does not exist for variant at index 578 in batch 3 2025-08-01 01:31:18,866 | WARNING | pyMut.annotate.actionable_mutation | Unknown oncogenicity for variant at index 578 in batch 3 2025-08-01 01:31:18,866 | WARNING | pyMut.annotate.actionable_mutation | Gene does not exist for variant at index 579 in batch 3 2025-08-01 01:31:18,866 | WARNING | pyMut.annotate.actionable_mutation | Unknown oncogenicity for variant at index 579 in batch 3 2025-08-01 01:31:18,867 | WARNING | pyMut.annotate.actionable_mutation | Gene does not exist for variant at index 580 in batch 3 2025-08-01 01:31:18,868 | WARNING | pyMut.annotate.actionable_mutation | Unknown oncogenicity for variant at index 580 in batch 3 2025-08-01 01:31:18,868 | WARNING | pyMut.annotate.actionable_mutation | Gene does not exist for variant at index 581 in batch 3 2025-08-01 01:31:18,868 | WARNING | pyMut.annotate.actionable_mutation | Unknown oncogenicity for variant at index 581 in batch 3 2025-08-01 01:31:18,868 | WARNING | pyMut.annotate.actionable_mutation | Gene does not exist for variant at index 582 in batch 3 2025-08-01 01:31:18,869 | WARNING | pyMut.annotate.actionable_mutation | Unknown oncogenicity for variant at index 582 in batch 3 2025-08-01 01:31:18,870 | WARNING | pyMut.annotate.actionable_mutation | Gene does not exist for variant at index 583 in batch 3 2025-08-01 01:31:18,871 | WARNING | pyMut.annotate.actionable_mutation | Unknown oncogenicity for variant at index 583 in batch 3 2025-08-01 01:31:18,872 | WARNING | pyMut.annotate.actionable_mutation | Gene does not exist for variant at index 584 in batch 3 2025-08-01 01:31:18,872 | WARNING | pyMut.annotate.actionable_mutation | Unknown oncogenicity for variant at index 584 in batch 3 2025-08-01 01:31:18,872 | WARNING | pyMut.annotate.actionable_mutation | Gene does not exist for variant at index 585 in batch 3 2025-08-01 01:31:18,873 | WARNING | pyMut.annotate.actionable_mutation | Unknown oncogenicity for variant at index 585 in batch 3 2025-08-01 01:31:18,873 | WARNING | pyMut.annotate.actionable_mutation | Gene does not exist for variant at index 586 in batch 3 2025-08-01 01:31:18,873 | WARNING | pyMut.annotate.actionable_mutation | Unknown oncogenicity for variant at index 586 in batch 3 2025-08-01 01:31:18,874 | WARNING | pyMut.annotate.actionable_mutation | Gene does not exist for variant at index 587 in batch 3 2025-08-01 01:31:18,875 | WARNING | pyMut.annotate.actionable_mutation | Unknown oncogenicity for variant at index 587 in batch 3 2025-08-01 01:31:18,875 | WARNING | pyMut.annotate.actionable_mutation | Gene does not exist for variant at index 588 in batch 3 2025-08-01 01:31:18,875 | WARNING | pyMut.annotate.actionable_mutation | Unknown oncogenicity for variant at index 588 in batch 3 2025-08-01 01:31:18,875 | WARNING | pyMut.annotate.actionable_mutation | Gene does not exist for variant at index 589 in batch 3 2025-08-01 01:31:18,876 | WARNING | pyMut.annotate.actionable_mutation | Unknown oncogenicity for variant at index 589 in batch 3 2025-08-01 01:31:18,876 | WARNING | pyMut.annotate.actionable_mutation | Gene does not exist for variant at index 590 in batch 3 2025-08-01 01:31:18,877 | WARNING | pyMut.annotate.actionable_mutation | Unknown oncogenicity for variant at index 590 in batch 3 2025-08-01 01:31:18,877 | WARNING | pyMut.annotate.actionable_mutation | Gene does not exist for variant at index 591 in batch 3 2025-08-01 01:31:18,877 | WARNING | pyMut.annotate.actionable_mutation | Unknown oncogenicity for variant at index 591 in batch 3 2025-08-01 01:31:18,878 | WARNING | pyMut.annotate.actionable_mutation | Gene does not exist for variant at index 592 in batch 3 2025-08-01 01:31:18,878 | WARNING | pyMut.annotate.actionable_mutation | Unknown oncogenicity for variant at index 592 in batch 3 2025-08-01 01:31:18,878 | WARNING | pyMut.annotate.actionable_mutation | Gene does not exist for variant at index 593 in batch 3 2025-08-01 01:31:18,879 | WARNING | pyMut.annotate.actionable_mutation | Unknown oncogenicity for variant at index 593 in batch 3 2025-08-01 01:31:18,879 | WARNING | pyMut.annotate.actionable_mutation | Gene does not exist for variant at index 594 in batch 3 2025-08-01 01:31:18,879 | WARNING | pyMut.annotate.actionable_mutation | Unknown oncogenicity for variant at index 594 in batch 3 2025-08-01 01:31:18,879 | WARNING | pyMut.annotate.actionable_mutation | Gene does not exist for variant at index 595 in batch 3 2025-08-01 01:31:18,879 | WARNING | pyMut.annotate.actionable_mutation | Unknown oncogenicity for variant at index 595 in batch 3 2025-08-01 01:31:18,880 | WARNING | pyMut.annotate.actionable_mutation | Gene does not exist for variant at index 596 in batch 3 2025-08-01 01:31:18,880 | WARNING | pyMut.annotate.actionable_mutation | Unknown oncogenicity for variant at index 596 in batch 3 2025-08-01 01:31:18,880 | WARNING | pyMut.annotate.actionable_mutation | Gene does not exist for variant at index 597 in batch 3 2025-08-01 01:31:18,880 | WARNING | pyMut.annotate.actionable_mutation | Unknown oncogenicity for variant at index 597 in batch 3 2025-08-01 01:31:18,881 | WARNING | pyMut.annotate.actionable_mutation | Unknown oncogenicity for variant at index 613 in batch 3 2025-08-01 01:31:18,881 | WARNING | pyMut.annotate.actionable_mutation | Unknown oncogenicity for variant at index 621 in batch 3 2025-08-01 01:31:18,881 | WARNING | pyMut.annotate.actionable_mutation | Unknown oncogenicity for variant at index 622 in batch 3 2025-08-01 01:31:18,882 | WARNING | pyMut.annotate.actionable_mutation | Unknown oncogenicity for variant at index 623 in batch 3 2025-08-01 01:31:18,882 | WARNING | pyMut.annotate.actionable_mutation | Gene does not exist for variant at index 624 in batch 3 2025-08-01 01:31:18,884 | WARNING | pyMut.annotate.actionable_mutation | Unknown oncogenicity for variant at index 624 in batch 3 2025-08-01 01:31:18,884 | WARNING | pyMut.annotate.actionable_mutation | Gene does not exist for variant at index 625 in batch 3 2025-08-01 01:31:18,885 | WARNING | pyMut.annotate.actionable_mutation | Unknown oncogenicity for variant at index 625 in batch 3 2025-08-01 01:31:18,885 | WARNING | pyMut.annotate.actionable_mutation | Gene does not exist for variant at index 626 in batch 3 2025-08-01 01:31:18,886 | WARNING | pyMut.annotate.actionable_mutation | Unknown oncogenicity for variant at index 626 in batch 3 2025-08-01 01:31:18,887 | WARNING | pyMut.annotate.actionable_mutation | Gene does not exist for variant at index 627 in batch 3 2025-08-01 01:31:18,887 | WARNING | pyMut.annotate.actionable_mutation | Unknown oncogenicity for variant at index 627 in batch 3 2025-08-01 01:31:18,888 | WARNING | pyMut.annotate.actionable_mutation | Gene does not exist for variant at index 628 in batch 3 2025-08-01 01:31:18,888 | WARNING | pyMut.annotate.actionable_mutation | Unknown oncogenicity for variant at index 628 in batch 3 2025-08-01 01:31:18,888 | WARNING | pyMut.annotate.actionable_mutation | Gene does not exist for variant at index 629 in batch 3 2025-08-01 01:31:18,889 | WARNING | pyMut.annotate.actionable_mutation | Unknown oncogenicity for variant at index 629 in batch 3 2025-08-01 01:31:18,889 | WARNING | pyMut.annotate.actionable_mutation | Gene does not exist for variant at index 630 in batch 3 2025-08-01 01:31:18,889 | WARNING | pyMut.annotate.actionable_mutation | Unknown oncogenicity for variant at index 630 in batch 3 2025-08-01 01:31:18,890 | WARNING | pyMut.annotate.actionable_mutation | Gene does not exist for variant at index 631 in batch 3 2025-08-01 01:31:18,890 | WARNING | pyMut.annotate.actionable_mutation | Unknown oncogenicity for variant at index 631 in batch 3 2025-08-01 01:31:18,891 | WARNING | pyMut.annotate.actionable_mutation | Gene does not exist for variant at index 632 in batch 3 2025-08-01 01:31:18,891 | WARNING | pyMut.annotate.actionable_mutation | Unknown oncogenicity for variant at index 632 in batch 3 2025-08-01 01:31:18,891 | WARNING | pyMut.annotate.actionable_mutation | Gene does not exist for variant at index 633 in batch 3 2025-08-01 01:31:18,891 | WARNING | pyMut.annotate.actionable_mutation | Unknown oncogenicity for variant at index 633 in batch 3 2025-08-01 01:31:18,892 | WARNING | pyMut.annotate.actionable_mutation | Gene does not exist for variant at index 634 in batch 3 2025-08-01 01:31:18,892 | WARNING | pyMut.annotate.actionable_mutation | Unknown oncogenicity for variant at index 634 in batch 3 2025-08-01 01:31:18,892 | WARNING | pyMut.annotate.actionable_mutation | Gene does not exist for variant at index 635 in batch 3 2025-08-01 01:31:18,892 | WARNING | pyMut.annotate.actionable_mutation | Unknown oncogenicity for variant at index 635 in batch 3 2025-08-01 01:31:18,892 | WARNING | pyMut.annotate.actionable_mutation | Gene does not exist for variant at index 636 in batch 3 2025-08-01 01:31:18,893 | WARNING | pyMut.annotate.actionable_mutation | Unknown oncogenicity for variant at index 636 in batch 3 2025-08-01 01:31:18,893 | WARNING | pyMut.annotate.actionable_mutation | Gene does not exist for variant at index 637 in batch 3 2025-08-01 01:31:18,893 | WARNING | pyMut.annotate.actionable_mutation | Unknown oncogenicity for variant at index 637 in batch 3 2025-08-01 01:31:18,895 | WARNING | pyMut.annotate.actionable_mutation | Gene does not exist for variant at index 638 in batch 3 2025-08-01 01:31:18,895 | WARNING | pyMut.annotate.actionable_mutation | Unknown oncogenicity for variant at index 638 in batch 3 2025-08-01 01:31:18,895 | WARNING | pyMut.annotate.actionable_mutation | Gene does not exist for variant at index 639 in batch 3 2025-08-01 01:31:18,896 | WARNING | pyMut.annotate.actionable_mutation | Unknown oncogenicity for variant at index 639 in batch 3 2025-08-01 01:31:18,897 | WARNING | pyMut.annotate.actionable_mutation | Gene does not exist for variant at index 640 in batch 3 2025-08-01 01:31:18,897 | WARNING | pyMut.annotate.actionable_mutation | Unknown oncogenicity for variant at index 640 in batch 3 2025-08-01 01:31:18,897 | WARNING | pyMut.annotate.actionable_mutation | Gene does not exist for variant at index 641 in batch 3 2025-08-01 01:31:18,897 | WARNING | pyMut.annotate.actionable_mutation | Unknown oncogenicity for variant at index 641 in batch 3 2025-08-01 01:31:18,898 | WARNING | pyMut.annotate.actionable_mutation | Gene does not exist for variant at index 642 in batch 3 2025-08-01 01:31:18,898 | WARNING | pyMut.annotate.actionable_mutation | Unknown oncogenicity for variant at index 642 in batch 3 2025-08-01 01:31:18,898 | WARNING | pyMut.annotate.actionable_mutation | Gene does not exist for variant at index 643 in batch 3 2025-08-01 01:31:18,898 | WARNING | pyMut.annotate.actionable_mutation | Unknown oncogenicity for variant at index 643 in batch 3 2025-08-01 01:31:18,899 | WARNING | pyMut.annotate.actionable_mutation | Gene does not exist for variant at index 644 in batch 3 2025-08-01 01:31:18,899 | WARNING | pyMut.annotate.actionable_mutation | Unknown oncogenicity for variant at index 644 in batch 3 2025-08-01 01:31:18,899 | WARNING | pyMut.annotate.actionable_mutation | Gene does not exist for variant at index 645 in batch 3 2025-08-01 01:31:18,899 | WARNING | pyMut.annotate.actionable_mutation | Unknown oncogenicity for variant at index 645 in batch 3 2025-08-01 01:31:18,900 | WARNING | pyMut.annotate.actionable_mutation | Gene does not exist for variant at index 646 in batch 3 2025-08-01 01:31:18,900 | WARNING | pyMut.annotate.actionable_mutation | Unknown oncogenicity for variant at index 646 in batch 3 2025-08-01 01:31:18,900 | WARNING | pyMut.annotate.actionable_mutation | Gene does not exist for variant at index 647 in batch 3 2025-08-01 01:31:18,901 | WARNING | pyMut.annotate.actionable_mutation | Unknown oncogenicity for variant at index 647 in batch 3 2025-08-01 01:31:18,901 | WARNING | pyMut.annotate.actionable_mutation | Gene does not exist for variant at index 648 in batch 3 2025-08-01 01:31:18,901 | WARNING | pyMut.annotate.actionable_mutation | Unknown oncogenicity for variant at index 648 in batch 3 2025-08-01 01:31:18,901 | WARNING | pyMut.annotate.actionable_mutation | Gene does not exist for variant at index 649 in batch 3 2025-08-01 01:31:18,902 | WARNING | pyMut.annotate.actionable_mutation | Unknown oncogenicity for variant at index 649 in batch 3 2025-08-01 01:31:18,902 | WARNING | pyMut.annotate.actionable_mutation | Gene does not exist for variant at index 650 in batch 3 2025-08-01 01:31:18,902 | WARNING | pyMut.annotate.actionable_mutation | Unknown oncogenicity for variant at index 650 in batch 3 2025-08-01 01:31:18,903 | WARNING | pyMut.annotate.actionable_mutation | Gene does not exist for variant at index 651 in batch 3 2025-08-01 01:31:18,903 | WARNING | pyMut.annotate.actionable_mutation | Unknown oncogenicity for variant at index 651 in batch 3 2025-08-01 01:31:18,903 | WARNING | pyMut.annotate.actionable_mutation | Gene does not exist for variant at index 652 in batch 3 2025-08-01 01:31:18,903 | WARNING | pyMut.annotate.actionable_mutation | Unknown oncogenicity for variant at index 652 in batch 3 2025-08-01 01:31:18,903 | WARNING | pyMut.annotate.actionable_mutation | Gene does not exist for variant at index 653 in batch 3 2025-08-01 01:31:18,904 | WARNING | pyMut.annotate.actionable_mutation | Unknown oncogenicity for variant at index 653 in batch 3 2025-08-01 01:31:18,904 | WARNING | pyMut.annotate.actionable_mutation | Gene does not exist for variant at index 654 in batch 3 2025-08-01 01:31:18,904 | WARNING | pyMut.annotate.actionable_mutation | Unknown oncogenicity for variant at index 654 in batch 3 2025-08-01 01:31:18,904 | WARNING | pyMut.annotate.actionable_mutation | Gene does not exist for variant at index 655 in batch 3 2025-08-01 01:31:18,904 | WARNING | pyMut.annotate.actionable_mutation | Unknown oncogenicity for variant at index 655 in batch 3 2025-08-01 01:31:18,905 | WARNING | pyMut.annotate.actionable_mutation | Unknown oncogenicity for variant at index 656 in batch 3 2025-08-01 01:31:18,905 | WARNING | pyMut.annotate.actionable_mutation | Gene does not exist for variant at index 657 in batch 3 2025-08-01 01:31:18,905 | WARNING | pyMut.annotate.actionable_mutation | Unknown oncogenicity for variant at index 657 in batch 3 2025-08-01 01:31:18,905 | WARNING | pyMut.annotate.actionable_mutation | Gene does not exist for variant at index 658 in batch 3 2025-08-01 01:31:18,906 | WARNING | pyMut.annotate.actionable_mutation | Unknown oncogenicity for variant at index 658 in batch 3 2025-08-01 01:31:18,906 | WARNING | pyMut.annotate.actionable_mutation | Gene does not exist for variant at index 659 in batch 3 2025-08-01 01:31:18,906 | WARNING | pyMut.annotate.actionable_mutation | Unknown oncogenicity for variant at index 659 in batch 3 2025-08-01 01:31:18,906 | WARNING | pyMut.annotate.actionable_mutation | Gene does not exist for variant at index 660 in batch 3 2025-08-01 01:31:18,906 | WARNING | pyMut.annotate.actionable_mutation | Unknown oncogenicity for variant at index 660 in batch 3 2025-08-01 01:31:18,907 | WARNING | pyMut.annotate.actionable_mutation | Gene does not exist for variant at index 661 in batch 3 2025-08-01 01:31:18,907 | WARNING | pyMut.annotate.actionable_mutation | Unknown oncogenicity for variant at index 661 in batch 3 2025-08-01 01:31:18,907 | WARNING | pyMut.annotate.actionable_mutation | Gene does not exist for variant at index 662 in batch 3 2025-08-01 01:31:18,907 | WARNING | pyMut.annotate.actionable_mutation | Unknown oncogenicity for variant at index 662 in batch 3 2025-08-01 01:31:18,908 | WARNING | pyMut.annotate.actionable_mutation | Gene does not exist for variant at index 663 in batch 3 2025-08-01 01:31:18,908 | WARNING | pyMut.annotate.actionable_mutation | Unknown oncogenicity for variant at index 663 in batch 3 2025-08-01 01:31:18,908 | WARNING | pyMut.annotate.actionable_mutation | Gene does not exist for variant at index 664 in batch 3 2025-08-01 01:31:18,908 | WARNING | pyMut.annotate.actionable_mutation | Unknown oncogenicity for variant at index 664 in batch 3 2025-08-01 01:31:18,908 | WARNING | pyMut.annotate.actionable_mutation | Gene does not exist for variant at index 665 in batch 3 2025-08-01 01:31:18,909 | WARNING | pyMut.annotate.actionable_mutation | Unknown oncogenicity for variant at index 665 in batch 3 2025-08-01 01:31:18,909 | WARNING | pyMut.annotate.actionable_mutation | Gene does not exist for variant at index 666 in batch 3 2025-08-01 01:31:18,909 | WARNING | pyMut.annotate.actionable_mutation | Unknown oncogenicity for variant at index 666 in batch 3 2025-08-01 01:31:18,909 | WARNING | pyMut.annotate.actionable_mutation | Gene does not exist for variant at index 667 in batch 3 2025-08-01 01:31:18,909 | WARNING | pyMut.annotate.actionable_mutation | Unknown oncogenicity for variant at index 667 in batch 3 2025-08-01 01:31:18,911 | WARNING | pyMut.annotate.actionable_mutation | Gene does not exist for variant at index 668 in batch 3 2025-08-01 01:31:18,913 | WARNING | pyMut.annotate.actionable_mutation | Unknown oncogenicity for variant at index 668 in batch 3 2025-08-01 01:31:18,913 | WARNING | pyMut.annotate.actionable_mutation | Gene does not exist for variant at index 669 in batch 3 2025-08-01 01:31:18,914 | WARNING | pyMut.annotate.actionable_mutation | Unknown oncogenicity for variant at index 669 in batch 3 2025-08-01 01:31:18,914 | WARNING | pyMut.annotate.actionable_mutation | Gene does not exist for variant at index 670 in batch 3 2025-08-01 01:31:18,914 | WARNING | pyMut.annotate.actionable_mutation | Unknown oncogenicity for variant at index 670 in batch 3 2025-08-01 01:31:18,915 | WARNING | pyMut.annotate.actionable_mutation | Gene does not exist for variant at index 671 in batch 3 2025-08-01 01:31:18,915 | WARNING | pyMut.annotate.actionable_mutation | Unknown oncogenicity for variant at index 671 in batch 3 2025-08-01 01:31:18,915 | WARNING | pyMut.annotate.actionable_mutation | Gene does not exist for variant at index 672 in batch 3 2025-08-01 01:31:18,916 | WARNING | pyMut.annotate.actionable_mutation | Unknown oncogenicity for variant at index 672 in batch 3 2025-08-01 01:31:18,916 | WARNING | pyMut.annotate.actionable_mutation | Gene does not exist for variant at index 673 in batch 3 2025-08-01 01:31:18,916 | WARNING | pyMut.annotate.actionable_mutation | Unknown oncogenicity for variant at index 673 in batch 3 2025-08-01 01:31:18,916 | WARNING | pyMut.annotate.actionable_mutation | Gene does not exist for variant at index 674 in batch 3 2025-08-01 01:31:18,917 | WARNING | pyMut.annotate.actionable_mutation | Unknown oncogenicity for variant at index 674 in batch 3 2025-08-01 01:31:18,917 | WARNING | pyMut.annotate.actionable_mutation | Unknown oncogenicity for variant at index 675 in batch 3 2025-08-01 01:31:18,917 | WARNING | pyMut.annotate.actionable_mutation | Unknown oncogenicity for variant at index 676 in batch 3 2025-08-01 01:31:18,917 | WARNING | pyMut.annotate.actionable_mutation | Unknown oncogenicity for variant at index 677 in batch 3 2025-08-01 01:31:18,917 | WARNING | pyMut.annotate.actionable_mutation | Unknown oncogenicity for variant at index 678 in batch 3 2025-08-01 01:31:18,918 | WARNING | pyMut.annotate.actionable_mutation | Unknown oncogenicity for variant at index 679 in batch 3 2025-08-01 01:31:18,918 | WARNING | pyMut.annotate.actionable_mutation | Unknown oncogenicity for variant at index 680 in batch 3 2025-08-01 01:31:18,918 | WARNING | pyMut.annotate.actionable_mutation | Unknown oncogenicity for variant at index 683 in batch 3 2025-08-01 01:31:18,920 | WARNING | pyMut.annotate.actionable_mutation | Unknown oncogenicity for variant at index 684 in batch 3 2025-08-01 01:31:18,921 | WARNING | pyMut.annotate.actionable_mutation | Unknown oncogenicity for variant at index 685 in batch 3 2025-08-01 01:31:18,922 | WARNING | pyMut.annotate.actionable_mutation | Gene does not exist for variant at index 686 in batch 3 2025-08-01 01:31:18,922 | WARNING | pyMut.annotate.actionable_mutation | Unknown oncogenicity for variant at index 686 in batch 3 2025-08-01 01:31:18,922 | WARNING | pyMut.annotate.actionable_mutation | Gene does not exist for variant at index 687 in batch 3 2025-08-01 01:31:18,923 | WARNING | pyMut.annotate.actionable_mutation | Unknown oncogenicity for variant at index 687 in batch 3 2025-08-01 01:31:18,924 | WARNING | pyMut.annotate.actionable_mutation | Gene does not exist for variant at index 688 in batch 3 2025-08-01 01:31:18,925 | WARNING | pyMut.annotate.actionable_mutation | Unknown oncogenicity for variant at index 688 in batch 3 2025-08-01 01:31:18,925 | WARNING | pyMut.annotate.actionable_mutation | Gene does not exist for variant at index 689 in batch 3 2025-08-01 01:31:18,926 | WARNING | pyMut.annotate.actionable_mutation | Unknown oncogenicity for variant at index 689 in batch 3 2025-08-01 01:31:18,926 | WARNING | pyMut.annotate.actionable_mutation | Gene does not exist for variant at index 690 in batch 3 2025-08-01 01:31:18,927 | WARNING | pyMut.annotate.actionable_mutation | Unknown oncogenicity for variant at index 690 in batch 3 2025-08-01 01:31:18,927 | WARNING | pyMut.annotate.actionable_mutation | Gene does not exist for variant at index 691 in batch 3 2025-08-01 01:31:18,927 | WARNING | pyMut.annotate.actionable_mutation | Unknown oncogenicity for variant at index 691 in batch 3 2025-08-01 01:31:18,927 | WARNING | pyMut.annotate.actionable_mutation | Gene does not exist for variant at index 692 in batch 3 2025-08-01 01:31:18,928 | WARNING | pyMut.annotate.actionable_mutation | Unknown oncogenicity for variant at index 692 in batch 3 2025-08-01 01:31:18,928 | WARNING | pyMut.annotate.actionable_mutation | Gene does not exist for variant at index 693 in batch 3 2025-08-01 01:31:18,928 | WARNING | pyMut.annotate.actionable_mutation | Unknown oncogenicity for variant at index 693 in batch 3 2025-08-01 01:31:18,928 | WARNING | pyMut.annotate.actionable_mutation | Gene does not exist for variant at index 694 in batch 3 2025-08-01 01:31:18,928 | WARNING | pyMut.annotate.actionable_mutation | Unknown oncogenicity for variant at index 694 in batch 3 2025-08-01 01:31:18,929 | WARNING | pyMut.annotate.actionable_mutation | Gene does not exist for variant at index 695 in batch 3 2025-08-01 01:31:18,929 | WARNING | pyMut.annotate.actionable_mutation | Unknown oncogenicity for variant at index 695 in batch 3 2025-08-01 01:31:18,930 | WARNING | pyMut.annotate.actionable_mutation | Gene does not exist for variant at index 696 in batch 3 2025-08-01 01:31:18,930 | WARNING | pyMut.annotate.actionable_mutation | Unknown oncogenicity for variant at index 696 in batch 3 2025-08-01 01:31:18,954 | INFO | pyMut.annotate.actionable_mutation | Adding OncoKB annotations to self.data 2025-08-01 01:31:19,204 | INFO | pyMut.annotate.actionable_mutation | OncoKB annotation completed successfully: 2091 variants annotated
Sample of MAF data after annotation:
| CHROM | POS | ID | REF | ALT | QUAL | FILTER | TCGA-AB-2988 | TCGA-AB-2869 | TCGA-AB-3009 | ... | oncokb_variantSummary | oncokb_tumorTypeSummary | oncokb_prognosticSummary | oncokb_diagnosticSummary | oncokb_diagnosticImplications | oncokb_prognosticImplications | oncokb_treatments | oncokb_dataVersion | oncokb_lastUpdate | oncokb_vus | |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 0 | chr9 | 100077177 | . | T | C | . | . | T|T | T|T | T|T | ... | [] | [] | [] | v5.0 | 07/28/2025 | False | ||||
| 1 | chr9 | 100085148 | . | G | A | . | . | G|G | G|G | G|G | ... | [] | [] | [] | v5.0 | 07/28/2025 | False | ||||
| 2 | chr9 | 100971322 | . | A | C | . | . | A|A | A|A | A|A | ... | [] | [] | [] | v5.0 | 07/28/2025 | False | ||||
| 3 | chr9 | 104086335 | . | C | T | . | . | C|C | C|C | C|C | ... | [] | [] | [] | v5.0 | 07/28/2025 | False | ||||
| 4 | chr9 | 104124840 | . | G | A | . | . | G|A | G|G | G|G | ... | [] | [] | [] | v5.0 | 07/28/2025 | False |
5 rows × 234 columns
MAF File (GRCh37) - OncoKB annotation statistics: oncokb_highestSensitiveLevel: 76 variants oncokb_highestResistanceLevel: 15 variants oncokb_highestDiagnosticImplicationLevel: 177 variants oncokb_highestPrognosticImplicationLevel: 119 variants oncokb_otherSignificantSensitiveLevels: 2091 variants oncokb_otherSignificantResistanceLevels: 2091 variants oncokb_hotspot: 2091 variants oncokb_geneSummary: 2091 variants oncokb_variantSummary: 2091 variants oncokb_tumorTypeSummary: 2091 variants oncokb_prognosticSummary: 2091 variants oncokb_diagnosticSummary: 2091 variants oncokb_diagnosticImplications: 2091 variants oncokb_prognosticImplications: 2091 variants oncokb_treatments: 2091 variants oncokb_dataVersion: 2091 variants oncokb_lastUpdate: 2091 variants oncokb_vus: 2091 variants
Conclusion¶
This notebook has demonstrated how to use the OncoKB annotation functionality to annotate genomic variants from a MAF file.
In [6]:
Copied!
print("\n" + "=" * 80)
print("CONCLUSION")
print("=" * 80)
# Check if the MAF dataset was annotated
maf_oncokb_columns = [col for col in maf_py_mut.data.columns if col.startswith('oncokb_')]
if maf_oncokb_columns:
# Show final annotation statistics
maf_annotation_counts = {
'Sensitivity': maf_py_mut.data['oncokb_highestSensitiveLevel'].notna().sum() if 'oncokb_highestSensitiveLevel' in maf_py_mut.data.columns else 0,
'Resistance': maf_py_mut.data['oncokb_highestResistanceLevel'].notna().sum() if 'oncokb_highestResistanceLevel' in maf_py_mut.data.columns else 0,
'Diagnostic': maf_py_mut.data['oncokb_highestDiagnosticImplicationLevel'].notna().sum() if 'oncokb_highestDiagnosticImplicationLevel' in maf_py_mut.data.columns else 0,
'Prognostic': maf_py_mut.data['oncokb_highestPrognosticImplicationLevel'].notna().sum() if 'oncokb_highestPrognosticImplicationLevel' in maf_py_mut.data.columns else 0,
'Hotspot': maf_py_mut.data['oncokb_hotspot'].sum() if 'oncokb_hotspot' in maf_py_mut.data.columns else 0,
'VUS': maf_py_mut.data['oncokb_vus'].sum() if 'oncokb_vus' in maf_py_mut.data.columns else 0
}
# Create a DataFrame for final results
results_df = pd.DataFrame({
'MAF (GRCh37)': maf_annotation_counts
})
print("Final OncoKB annotation results for MAF file:")
display(results_df)
# Visualize results
results_df.plot(kind='bar', figsize=(10, 6))
plt.title('OncoKB Annotations for MAF File (GRCh37)')
plt.xlabel('Annotation Type')
plt.ylabel('Number of Variants')
plt.xticks(rotation=45)
plt.tight_layout()
plt.show()
# Calculate annotation rate
maf_total = len(maf_py_mut.data)
maf_annotated = maf_py_mut.data[maf_py_mut.data['oncokb_highestSensitiveLevel'].notna() |
maf_py_mut.data['oncokb_highestResistanceLevel'].notna() |
maf_py_mut.data['oncokb_highestDiagnosticImplicationLevel'].notna() |
maf_py_mut.data['oncokb_highestPrognosticImplicationLevel'].notna()].shape[0] if all(col in maf_py_mut.data.columns for col in ['oncokb_highestSensitiveLevel', 'oncokb_highestResistanceLevel', 'oncokb_highestDiagnosticImplicationLevel', 'oncokb_highestPrognosticImplicationLevel']) else 0
print(f"\nAnnotation rate: {maf_annotated}/{maf_total} variants annotated ({maf_annotated/maf_total*100:.2f}%)")
print("\nSUMMARY:")
print("This notebook successfully demonstrated how to:")
print("1. Load OncoKB API token from .env file")
print("2. Load a MAF file with GRCh37 assembly")
print("3. Annotate variants with OncoKB actionable mutation data")
print("4. Display annotation statistics and results")
print("\nThe OncoKB annotations provide valuable information about the clinical actionability of variants.")
else:
print("MAF dataset was not annotated successfully. Please check your OncoKB API token and try again.")
print("\n" + "=" * 80)
print("CONCLUSION")
print("=" * 80)
# Check if the MAF dataset was annotated
maf_oncokb_columns = [col for col in maf_py_mut.data.columns if col.startswith('oncokb_')]
if maf_oncokb_columns:
# Show final annotation statistics
maf_annotation_counts = {
'Sensitivity': maf_py_mut.data['oncokb_highestSensitiveLevel'].notna().sum() if 'oncokb_highestSensitiveLevel' in maf_py_mut.data.columns else 0,
'Resistance': maf_py_mut.data['oncokb_highestResistanceLevel'].notna().sum() if 'oncokb_highestResistanceLevel' in maf_py_mut.data.columns else 0,
'Diagnostic': maf_py_mut.data['oncokb_highestDiagnosticImplicationLevel'].notna().sum() if 'oncokb_highestDiagnosticImplicationLevel' in maf_py_mut.data.columns else 0,
'Prognostic': maf_py_mut.data['oncokb_highestPrognosticImplicationLevel'].notna().sum() if 'oncokb_highestPrognosticImplicationLevel' in maf_py_mut.data.columns else 0,
'Hotspot': maf_py_mut.data['oncokb_hotspot'].sum() if 'oncokb_hotspot' in maf_py_mut.data.columns else 0,
'VUS': maf_py_mut.data['oncokb_vus'].sum() if 'oncokb_vus' in maf_py_mut.data.columns else 0
}
# Create a DataFrame for final results
results_df = pd.DataFrame({
'MAF (GRCh37)': maf_annotation_counts
})
print("Final OncoKB annotation results for MAF file:")
display(results_df)
# Visualize results
results_df.plot(kind='bar', figsize=(10, 6))
plt.title('OncoKB Annotations for MAF File (GRCh37)')
plt.xlabel('Annotation Type')
plt.ylabel('Number of Variants')
plt.xticks(rotation=45)
plt.tight_layout()
plt.show()
# Calculate annotation rate
maf_total = len(maf_py_mut.data)
maf_annotated = maf_py_mut.data[maf_py_mut.data['oncokb_highestSensitiveLevel'].notna() |
maf_py_mut.data['oncokb_highestResistanceLevel'].notna() |
maf_py_mut.data['oncokb_highestDiagnosticImplicationLevel'].notna() |
maf_py_mut.data['oncokb_highestPrognosticImplicationLevel'].notna()].shape[0] if all(col in maf_py_mut.data.columns for col in ['oncokb_highestSensitiveLevel', 'oncokb_highestResistanceLevel', 'oncokb_highestDiagnosticImplicationLevel', 'oncokb_highestPrognosticImplicationLevel']) else 0
print(f"\nAnnotation rate: {maf_annotated}/{maf_total} variants annotated ({maf_annotated/maf_total*100:.2f}%)")
print("\nSUMMARY:")
print("This notebook successfully demonstrated how to:")
print("1. Load OncoKB API token from .env file")
print("2. Load a MAF file with GRCh37 assembly")
print("3. Annotate variants with OncoKB actionable mutation data")
print("4. Display annotation statistics and results")
print("\nThe OncoKB annotations provide valuable information about the clinical actionability of variants.")
else:
print("MAF dataset was not annotated successfully. Please check your OncoKB API token and try again.")
================================================================================ CONCLUSION ================================================================================ Final OncoKB annotation results for MAF file:
| MAF (GRCh37) | |
|---|---|
| Sensitivity | 76 |
| Resistance | 15 |
| Diagnostic | 177 |
| Prognostic | 119 |
| Hotspot | 91 |
| VUS | 25 |
Annotation rate: 207/2091 variants annotated (9.90%) SUMMARY: This notebook successfully demonstrated how to: 1. Load OncoKB API token from .env file 2. Load a MAF file with GRCh37 assembly 3. Annotate variants with OncoKB actionable mutation data 4. Display annotation statistics and results The OncoKB annotations provide valuable information about the clinical actionability of variants.